Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2979411Fold d.143: SAICAR synthase-like [56103] (1 superfamily)
    consists of two alpha+beta subdomains
  4. 2979412Superfamily d.143.1: SAICAR synthase-like [56104] (4 families) (S)
    shares functional and structural similarities with the ATP-grasp fold and protein kinase superfamilies
  5. 2979493Family d.143.1.0: automated matches [191445] (1 protein)
    not a true family
  6. 2979494Protein automated matches [190664] (8 species)
    not a true protein

Species:

  1. 2979495Clostridium perfringens [TaxId:195103] [189443] (1 PDB entry)
  2. 2979498Ehrlichia chaffeensis [TaxId:205920] [232728] (1 PDB entry)
  3. 2979500Escherichia coli [TaxId:562] [187765] (2 PDB entries)
    1. Domains for 2gqr:
      1. 2979501Domain d2gqra_: 2gqr A: [164802]
        automated match to d1kutb_
        complexed with adp, mg
      2. 2979502Domain d2gqrb_: 2gqr B: [164803]
        automated match to d1kutb_
        complexed with adp, mg
    2. Domains for 2gqs:
      1. 2979503Domain d2gqsa_: 2gqs A: [164804]
        automated match to d1kutb_
        complexed with adp, c2r, fmt, mg
      2. 2979504Domain d2gqsb_: 2gqs B: [164805]
        automated match to d1kutb_
        complexed with adp, c2r, fmt, mg
  4. 2979505Geobacillus kaustophilus [TaxId:1462] [188243] (1 PDB entry)
  5. 2979508Methanocaldococcus jannaschii [TaxId:2190] [188262] (2 PDB entries)
    1. Domain for 2yzl:
    2. Domains for 2z02:
      1. 2979509Domain d2z02a_: 2z02 A: [170946]
        automated match to d1kutb_
        complexed with atp, cit, so4
      2. 2979510Domain d2z02b_: 2z02 B: [170947]
        automated match to d1kutb_
        complexed with atp, cit, so4
  6. 2979512Pneumococcus (Streptococcus pneumoniae) [TaxId:1313] [226677] (3 PDB entries)
    1. Domains for 4fe2:
      1. 2979513Domain d4fe2a_: 4fe2 A: [221156]
        automated match to d2yzla_
        complexed with 144, act, adp, air, asp, cl, mg
      2. 2979514Domain d4fe2b_: 4fe2 B: [221157]
        automated match to d2yzla_
        complexed with 144, act, adp, air, asp, cl, mg
    2. Domains for 4fgr:
      1. 2979515Domain d4fgra_: 4fgr A: [221207]
        automated match to d2yzla_
        complexed with act, adp, cl, mg
      2. 2979516Domain d4fgrb_: 4fgr B: [221208]
        automated match to d2yzla_
        complexed with act, adp, cl, mg
    3. Domains for 4nye:
      1. 2979517Domain d4nyea_: 4nye A: [238268]
        automated match to d4fe2b_
        complexed with act, adp, cl, mg
      2. 2979518Domain d4nyeb_: 4nye B: [238269]
        automated match to d4fe2b_
        complexed with act, adp, cl, mg
  7. 2979519Pyrococcus horikoshii OT3 [TaxId:70601] [194472] (16 PDB entries)
    1. Domains for 3u54:
      1. 2979539Domain d3u54a_: 3u54 A: [217199]
        automated match to d3u55a_
        complexed with act, bu1, cd, so4
      2. 2979540Domain d3u54b_: 3u54 B: [217200]
        automated match to d3u55a_
        complexed with act, bu1, cd, so4
    2. Domain for 3u55:
    3. Domain for 4o7l:
    4. Domain for 4o7n:
    5. Domain for 4o7r:
    6. Domain for 4o7s:
    7. Domain for 4o7t:
    8. Domain for 4o7v:
    9. Domain for 4o7w:
    10. Domain for 4o7y:
    11. Domain for 4o7z:
    12. Domains for 4o81:
      1. 2979526Domain d4o81a_: 4o81 A: [268469]
        automated match to d2z02a_
        complexed with adp, amp, bu1, cd
      2. 2979527Domain d4o81b_: 4o81 B: [268473]
        automated match to d2z02a_
        complexed with adp, amp, bu1, cd
    13. Domains for 4o82:
      1. 2979536Domain d4o82a_: 4o82 A: [268475]
        automated match to d2z02a_
        complexed with adp, amp, cd
      2. 2979537Domain d4o82b_: 4o82 B: [268471]
        automated match to d2z02a_
        complexed with adp, amp, cd
    14. Domains for 4o83:
      1. 2979524Domain d4o83a_: 4o83 A: [268472]
        automated match to d2z02a_
        complexed with adp, amp, bu1, cd, po4
      2. 2979525Domain d4o83b_: 4o83 B: [268476]
        automated match to d2z02a_
        complexed with adp, amp, bu1, cd, po4
    15. Domains for 4o84:
      1. 2979530Domain d4o84a_: 4o84 A: [268478]
        automated match to d2z02a_
        complexed with 5gp, bu1, cd, po4
      2. 2979531Domain d4o84b_: 4o84 B: [268479]
        automated match to d2z02a_
        complexed with 5gp, bu1, cd, po4
    16. Domain for 4o86:
  8. 2979541Zebrafish (Danio rerio) [TaxId:7955] [319711] (3 PDB entries)
    1. Domain for 5e3s:
    2. Domain for 6cmw:
    3. Domain for 6cn2:

More info for Protein automated matches from d.143.1.0: automated matches

Timeline for Protein automated matches from d.143.1.0: automated matches: