Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2485265Fold c.93: Periplasmic binding protein-like I [53821] (1 superfamily)
    consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
    parallel beta-sheet of 6 strands, order 213456
  4. 2485266Superfamily c.93.1: Periplasmic binding protein-like I [53822] (2 families) (S)
    Similar in architecture to the superfamily II but partly differs in topology
  5. 2485563Family c.93.1.0: automated matches [191439] (1 protein)
    not a true family
  6. 2485564Protein automated matches [190646] (71 species)
    not a true protein

Species:

  1. 2485565Actinobacillus succinogenes [TaxId:339671] [188337] (2 PDB entries)
    1. Domains for 3c3k:
      1. 2485566Domain d3c3ka1: 3c3k A:7-277 [173018]
        Other proteins in same PDB: d3c3ka2, d3c3kb2
        automated match to d1sxga_
        complexed with cl, gol
      2. 2485567Domain d3c3kb1: 3c3k B:7-277 [173019]
        Other proteins in same PDB: d3c3ka2, d3c3kb2
        automated match to d1sxga_
        complexed with cl, gol
    2. Domains for 4ywh:
      1. 2485568Domain d4ywha1: 4ywh A:24-332 [310113]
        Other proteins in same PDB: d4ywha2
        automated match to d4ry9a_
        complexed with xyp
      2. 2485569Domain d4ywhb_: 4ywh B: [310115]
        Other proteins in same PDB: d4ywha2
        automated match to d4ry9a_
        complexed with xyp
  2. 2485570Actinomyces odontolyticus [TaxId:411466] [275552] (1 PDB entry)
  3. 2485575Agrobacterium radiobacter [TaxId:311403] [268807] (1 PDB entry)
  4. 2485577Agrobacterium tumefaciens [TaxId:176299] [225916] (8 PDB entries)
    1. Domain for 3ip5:
    2. Domain for 3ip6:
    3. Domain for 3ip7:
    4. Domain for 3ip9:
    5. Domain for 3ipa:
    6. Domain for 3ipc:
    7. Domains for 3urm:
      1. 2485584Domain d3urma_: 3urm A: [345022]
        automated match to d4wwha_
        complexed with gal
      2. 2485585Domain d3urmb_: 3urm B: [345023]
        automated match to d4wwha_
        complexed with gal
    8. Domains for 3uug:
      1. 2485582Domain d3uuga_: 3uug A: [345024]
        automated match to d4wwha_
        complexed with bdp
      2. 2485583Domain d3uugb_: 3uug B: [345025]
        automated match to d4wwha_
        complexed with bdp
  5. 2485588Agrobacterium vitis [TaxId:311402] [261009] (3 PDB entries)
    1. Domains for 4wt7:
      1. 2485594Domain d4wt7a_: 4wt7 A: [261010]
        automated match to d3l49a_
        complexed with cl, x9x
      2. 2485595Domain d4wt7b_: 4wt7 B: [261014]
        automated match to d3l49a_
        complexed with cl, x9x
    2. Domain for 4wut:
    3. Domains for 5dkv:
      1. 2485590Domain d5dkva1: 5dkv A:29-329 [277522]
        Other proteins in same PDB: d5dkva2
        automated match to d1guda_
        complexed with t6t
      2. 2485591Domain d5dkvb_: 5dkv B: [277517]
        Other proteins in same PDB: d5dkva2
        automated match to d1guda_
        complexed with t6t
      3. 2485592Domain d5dkvc_: 5dkv C: [277523]
        Other proteins in same PDB: d5dkva2
        automated match to d1guda_
        complexed with t6t
      4. 2485593Domain d5dkvd_: 5dkv D: [277524]
        Other proteins in same PDB: d5dkva2
        automated match to d1guda_
        complexed with t6t
  6. 2485596Alkaliphilus metalliredigens [TaxId:293826] [255780] (1 PDB entry)
  7. 2485599Anabaena variabilis [TaxId:240292] [256373] (9 PDB entries)
    1. Domains for 4nqr:
      1. 2485600Domain d4nqra_: 4nqr A: [254012]
        automated match to d3ipca_
        complexed with ala, fmt, mg, peg; mutant
      2. 2485601Domain d4nqrb_: 4nqr B: [254013]
        automated match to d3ipca_
        complexed with ala, fmt, mg, peg; mutant
    2. Domains for 4nv3:
      1. 2485602Domain d4nv3a_: 4nv3 A: [254025]
        automated match to d3ipca_
        complexed with act, mg, val; mutant
      2. 2485603Domain d4nv3b_: 4nv3 B: [254026]
        automated match to d3ipca_
        complexed with act, mg, val; mutant
    3. Domains for 4oat:
      1. 2485608Domain d4oata_: 4oat A: [254043]
        automated match to d3ipca_
        complexed with cl, ile, mg; mutant
      2. 2485609Domain d4oatb_: 4oat B: [254044]
        automated match to d3ipca_
        complexed with cl, ile, mg; mutant
    4. Domains for 4obb:
      1. 2485613Domain d4obba_: 4obb A: [254047]
        automated match to d3ipca_
        complexed with 1qq, mg
      2. 2485614Domain d4obbb_: 4obb B: [254048]
        automated match to d3ipca_
        complexed with 1qq, mg
    5. Domains for 4og2:
      1. 2485604Domain d4og2a_: 4og2 A: [254056]
        automated match to d3ipca_
        complexed with cl, leu, mg; mutant
      2. 2485605Domain d4og2b_: 4og2 B: [254057]
        automated match to d3ipca_
        complexed with cl, leu, mg; mutant
    6. Domains for 4otz:
      1. 2485610Domain d4otza_: 4otz A: [254063]
        automated match to d3ipca_
        complexed with cys, mg; mutant
      2. 2485611Domain d4otzb_: 4otz B: [254064]
        automated match to d3ipca_
        complexed with cys, mg; mutant
    7. Domains for 4qym:
      1. 2485615Domain d4qyma_: 4qym A: [263787]
        automated match to d4nqra_
        complexed with met, mg, val; mutant
      2. 2485616Domain d4qymb_: 4qym B: [259000]
        automated match to d4nqrb_
        complexed with met, mg, val; mutant
    8. Domain for 4rdc:
    9. Domains for 4rv5:
      1. 2485606Domain d4rv5a_: 4rv5 A: [261596]
        automated match to d4nqrb_
        complexed with fmt, mg, pyr
      2. 2485607Domain d4rv5b_: 4rv5 B: [261744]
        automated match to d4nqrb_
        complexed with fmt, mg, pyr
  8. 2485617Arthrobacter sp. [TaxId:290399] [260960] (2 PDB entries)
    1. Domains for 4rkq:
      1. 2485618Domain d4rkqa1: 4rkq A:62-341 [267393]
        Other proteins in same PDB: d4rkqa2, d4rkqb2, d4rkqc2, d4rkqd2
        automated match to d4rkra_
        complexed with cl, edo, mg
      2. 2485619Domain d4rkqb1: 4rkq B:69-341 [267394]
        Other proteins in same PDB: d4rkqa2, d4rkqb2, d4rkqc2, d4rkqd2
        automated match to d4rkra_
        complexed with cl, edo, mg
      3. 2485620Domain d4rkqc1: 4rkq C:69-341 [267395]
        Other proteins in same PDB: d4rkqa2, d4rkqb2, d4rkqc2, d4rkqd2
        automated match to d4rkra_
        complexed with cl, edo, mg
      4. 2485621Domain d4rkqd1: 4rkq D:70-341 [267396]
        Other proteins in same PDB: d4rkqa2, d4rkqb2, d4rkqc2, d4rkqd2
        automated match to d4rkra_
        complexed with cl, edo, mg
    2. Domains for 4rkr:
      1. 2485622Domain d4rkra1: 4rkr A:62-341 [260961]
        Other proteins in same PDB: d4rkra2, d4rkrb2, d4rkrc2, d4rkrd2
        automated match to d2nzug_
        complexed with lbt
      2. 2485623Domain d4rkrb1: 4rkr B:69-341 [261146]
        Other proteins in same PDB: d4rkra2, d4rkrb2, d4rkrc2, d4rkrd2
        automated match to d2nzug_
        complexed with lbt
      3. 2485624Domain d4rkrc1: 4rkr C:69-341 [263883]
        Other proteins in same PDB: d4rkra2, d4rkrb2, d4rkrc2, d4rkrd2
        automated match to d4rkra_
        complexed with lbt
      4. 2485625Domain d4rkrd1: 4rkr D:70-341 [260962]
        Other proteins in same PDB: d4rkra2, d4rkrb2, d4rkrc2, d4rkrd2
        automated match to d2nzug_
        complexed with lbt
  9. 2485626Bacillus cytotoxicus [TaxId:315749] [225781] (1 PDB entry)
  10. 2485629Bacillus halodurans [TaxId:272558] [270918] (2 PDB entries)
    1. Domains for 3g1w:
      1. 2485630Domain d3g1wa_: 3g1w A: [344719]
        automated match to d5hsga_
      2. 2485631Domain d3g1wb_: 3g1w B: [344720]
        automated match to d5hsga_
    2. Domain for 4yo7:
  11. 2485633Bacillus subtilis [TaxId:1423] [226286] (2 PDB entries)
    1. Domain for 2fep:
    2. Domains for 3tb6:
      1. 2485634Domain d3tb6a_: 3tb6 A: [216712]
        automated match to d2nzug_
        complexed with arb, gol
      2. 2485635Domain d3tb6b_: 3tb6 B: [216713]
        automated match to d2nzug_
        complexed with arb, gol
  12. 2485637Bacteroides fragilis [TaxId:272559] [267837] (1 PDB entry)
  13. 2485640Bacteroides thetaiotaomicron [TaxId:226186] [311253] (1 PDB entry)
  14. 2485643Bifidobacterium animalis [TaxId:442563] [328754] (1 PDB entry)
  15. 2485645Bifidobacterium animalis [TaxId:555970] [256375] (1 PDB entry)
  16. 2485647Brachyspira murdochii [TaxId:526224] [311391] (1 PDB entry)
  17. 2485649Brucella melitensis [TaxId:224914] [228825] (1 PDB entry)
  18. 2485654Burkholderia graminis [TaxId:396598] [314777] (1 PDB entry)
  19. 2485656Burkholderia multivorans [TaxId:395019] [271594] (1 PDB entry)
  20. 2485658Burkholderia phymatum [TaxId:391038] [231274] (1 PDB entry)
  21. 2485660Burkholderia thailandensis [TaxId:271848] [225530] (2 PDB entries)
    1. Domains for 3egc:
      1. 2485662Domain d3egca_: 3egc A: [209493]
        automated match to d2nzug_
      2. 2485663Domain d3egcb_: 3egc B: [209494]
        automated match to d2nzug_
      3. 2485664Domain d3egcc_: 3egc C: [209495]
        automated match to d2nzug_
      4. 2485665Domain d3egcd_: 3egc D: [209496]
        automated match to d2nzug_
      5. 2485666Domain d3egce_: 3egc E: [209497]
        automated match to d2nzug_
      6. 2485667Domain d3egcf_: 3egc F: [209498]
        automated match to d2nzug_
    2. Domain for 4kzk:
  22. 2485668Caulobacter crescentus [TaxId:190650] [229832] (1 PDB entry)
  23. 2485671Chloroflexus aggregans [TaxId:326427] [267824] (1 PDB entry)
  24. 2485673Chromobacterium violaceum [TaxId:536] [255861] (1 PDB entry)
  25. 2485676Clostridium acetobutylicum [TaxId:272562] [255840] (1 PDB entry)
  26. 2485678Clostridium phytofermentans [TaxId:357809] [231861] (2 PDB entries)
    1. Domains for 3brs:
      1. 2485680Domain d3brsa_: 3brs A: [231862]
        automated match to d3ksma_
      2. 2485681Domain d3brsb_: 3brs B: [231863]
        automated match to d3ksma_
    2. Domain for 4ys6:
  27. 2485682Corynebacterium glutamicum [TaxId:1718] [225651] (2 PDB entries)
    1. Domains for 3gyb:
      1. 2485683Domain d3gyba_: 3gyb A: [210730]
        automated match to d3k9cb_
        complexed with mg
      2. 2485684Domain d3gybb_: 3gyb B: [210731]
        automated match to d3k9cb_
        complexed with mg
    2. Domains for 3jvd:
      1. 2485685Domain d3jvda_: 3jvd A: [247059]
        automated match to d2qu7a_
        complexed with gol, so4
      2. 2485686Domain d3jvdb_: 3jvd B: [247060]
        automated match to d2qu7a_
        complexed with gol, so4
  28. 2485687Corynebacterium glutamicum [TaxId:196627] [255762] (1 PDB entry)
  29. 2485690Desulfitobacterium hafniense [TaxId:272564] [228009] (2 PDB entries)
    1. Domain for 4mlc:
    2. Domain for 4q6b:
  30. 2485693Enterococcus faecalis [TaxId:226185] [231906] (2 PDB entries)
    1. Domain for 3cs3:
    2. Domains for 4rk0:
      1. 2485694Domain d4rk0a_: 4rk0 A: [260794]
        automated match to d2o20b_
        complexed with rib
      2. 2485695Domain d4rk0b_: 4rk0 B: [260799]
        automated match to d2o20b_
        complexed with rib
      3. 2485696Domain d4rk0c_: 4rk0 C: [260793]
        automated match to d2o20b_
        complexed with rib
      4. 2485697Domain d4rk0d_: 4rk0 D: [260800]
        automated match to d2o20b_
        complexed with rib
  31. 2485699Enterococcus faecium [TaxId:333849] [260801] (1 PDB entry)
  32. 2485706Escherichia coli K-12 [TaxId:83333] [225166] (3 PDB entries)
    1. Domains for 2iks:
      1. 2485707Domain d2iksa_: 2iks A: [204804]
        automated match to d1dbqa_
      2. 2485708Domain d2iksb_: 2iks B: [204805]
        automated match to d1dbqa_
    2. Domains for 3brq:
      1. 2485709Domain d3brqa_: 3brq A: [208716]
        automated match to d1jyfa_
        complexed with fru, na, so4
      2. 2485710Domain d3brqb_: 3brq B: [208717]
        automated match to d1jyfa_
        complexed with fru, na, so4
    3. Domains for 3dbi:
      1. 2485711Domain d3dbia_: 3dbi A: [245616]
        automated match to d3brqb_
        protein/DNA complex; complexed with gol, po4
      2. 2485712Domain d3dbib_: 3dbi B: [245617]
        automated match to d3brqb_
        protein/DNA complex; complexed with gol, po4
      3. 2485713Domain d3dbic_: 3dbi C: [245618]
        automated match to d3brqb_
        protein/DNA complex; complexed with gol, po4
  33. 2485714Escherichia coli [TaxId:511145] [311314] (3 PDB entries)
    1. Domain for 3m9w:
    2. Domain for 3m9x:
    3. Domains for 3ma0:
      1. 2485715Domain d3ma0a1: 3ma0 A:1-307 [343839]
        Other proteins in same PDB: d3ma0a2
        automated match to d3ma0b_
        complexed with xyp
      2. 2485716Domain d3ma0b_: 3ma0 B: [305924]
        Other proteins in same PDB: d3ma0a2
        automated match to d4rwea_
        complexed with xyp
      3. 2485717Domain d3ma0c_: 3ma0 C: [305925]
        Other proteins in same PDB: d3ma0a2
        automated match to d4rwea_
        complexed with xyp
  34. 2485720Exiguobacterium sibiricum [TaxId:262543] [255918] (1 PDB entry)
  35. 2485723Hahella chejuensis [TaxId:349521] [196493] (1 PDB entry)
  36. 2485726Human (Homo sapiens) [TaxId:9606] [189363] (13 PDB entries)
    1. Domain for 3mq4:
    2. Domain for 3sm9:
    3. Domains for 4xaq:
      1. 2485729Domain d4xaqa_: 4xaq A: [270112]
        automated match to d3sm9a_
        complexed with 40f, cl, so4
      2. 2485730Domain d4xaqb_: 4xaq B: [270113]
        automated match to d3sm9a_
        complexed with 40f, cl, so4
    4. Domain for 4xar:
    5. Domains for 4xas:
      1. 2485733Domain d4xasa_: 4xas A: [270110]
        automated match to d3sm9a_
        complexed with 40h
      2. 2485734Domain d4xasb_: 4xas B: [270111]
        automated match to d3sm9a_
        complexed with 40h
    6. Domain for 5c5c:
    7. Domains for 5cni:
      1. 2485738Domain d5cnia_: 5cni A: [276673]
        automated match to d3sm9a_
        complexed with cl, ggl, na, nag
      2. 2485739Domain d5cnib_: 5cni B: [276675]
        automated match to d3sm9a_
        complexed with cl, ggl, na, nag
    8. Domains for 5cnj:
      1. 2485736Domain d5cnja_: 5cnj A: [276676]
        automated match to d3sm9a_
        complexed with 52q, nag
      2. 2485737Domain d5cnjb_: 5cnj B: [276677]
        automated match to d3sm9a_
        complexed with 52q, nag
    9. Domains for 5cnk:
      1. 2485741Domain d5cnka_: 5cnk A: [276678]
        Other proteins in same PDB: d5cnkc2
        automated match to d3sm9a_
        complexed with ggl, iod
      2. 2485742Domain d5cnkb_: 5cnk B: [276680]
        Other proteins in same PDB: d5cnkc2
        automated match to d3sm9a_
        complexed with ggl, iod
      3. 2485743Domain d5cnkc1: 5cnk C:30-507 [301973]
        Other proteins in same PDB: d5cnkc2
        automated match to d4xara_
        complexed with ggl, iod
    10. Domain for 5cnm:
    11. Domain for 5kc8:
    12. Domains for 6bsz:
      1. 3049760Domain d6bszb_: 6bsz B: [349822]
        Other proteins in same PDB: d6bsza2
        automated match to d4xara_
        complexed with ggl, nag, so4
      2. 3049885Domain d6bsza1: 6bsz A:37-514 [349947]
        Other proteins in same PDB: d6bsza2
        automated match to d4xara_
        complexed with ggl, nag, so4
    13. Domains for 6bt5:
      1. 3049772Domain d6bt5a1: 6bt5 A:37-514 [349834]
        Other proteins in same PDB: d6bt5a2
        automated match to d4xara_
        complexed with e7p, nag
      2. 3049794Domain d6bt5b_: 6bt5 B: [349856]
        Other proteins in same PDB: d6bt5a2
        automated match to d4xara_
        complexed with e7p, nag
  37. 2485744Klebsiella pneumoniae [TaxId:272620] [188448] (2 PDB entries)
    1. Domain for 3d02:
    2. Domain for 5hsg:
  38. 2485747Kribbella flavida [TaxId:479435] [311395] (1 PDB entry)
  39. 2485749Lactobacillus acidophilus [TaxId:1579] [196560] (1 PDB entry)
  40. 2485752Lactobacillus brevis [TaxId:387344] [225768] (1 PDB entry)
  41. 2485757Lactobacillus casei [TaxId:321967] [260805] (4 PDB entries)
    1. Domain for 4rk3:
    2. Domain for 4rk4:
    3. Domain for 4rk5:
    4. Domain for 4wxe:
  42. 2485762Legionella pneumophila [TaxId:272624] [233482] (1 PDB entry)
  43. 2485765Mannheimia haemolytica [TaxId:272629] [268809] (1 PDB entry)
  44. 2485768Mouse (Mus musculus) [TaxId:10090] [320091] (1 PDB entry)
  45. 2485772Mycobacterium smegmatis [TaxId:246196] [232714] (3 PDB entries)
    1. Domains for 3kke:
      1. 2485775Domain d3kkea_: 3kke A: [232715]
        automated match to d4kmra_
        complexed with act
      2. 2485776Domain d3kkeb_: 3kke B: [232716]
        automated match to d4kmra_
        complexed with act
      3. 2485777Domain d3kkec_: 3kke C: [232717]
        automated match to d4kmra_
        complexed with act
      4. 2485778Domain d3kked_: 3kke D: [232718]
        automated match to d4kmra_
        complexed with act
    2. Domains for 4wwh:
      1. 2485773Domain d4wwha_: 4wwh A: [341922]
        automated match to d4ywhb_
        complexed with gal, trs
      2. 2485774Domain d4wwhb_: 4wwh B: [341935]
        automated match to d4ywhb_
        complexed with gal, trs
    3. Domain for 4yv7:
  46. 2485780Norway rat (Rattus norvegicus) [TaxId:10116] [311293] (5 PDB entries)
    1. Domains for 3h6g:
      1. 2485783Domain d3h6ga_: 3h6g A: [305455]
        automated match to d3sajd_
        complexed with ca, nag, tla
      2. 2485784Domain d3h6gb_: 3h6g B: [305456]
        automated match to d3sajd_
        complexed with ca, nag, tla
    2. Domains for 3h6h:
      1. 2485787Domain d3h6ha_: 3h6h A: [305457]
        automated match to d3sajd_
        complexed with ca, nag
      2. 2485788Domain d3h6hb_: 3h6h B: [305458]
        automated match to d3sajd_
        complexed with ca, nag
    3. Domains for 3olz:
      1. 2485781Domain d3olza_: 3olz A: [306115]
        automated match to d3sajd_
        complexed with cl, nag
      2. 2485782Domain d3olzb_: 3olz B: [306116]
        automated match to d3sajd_
        complexed with cl, nag
    4. Domains for 3qlt:
      1. 2485789Domain d3qlta_: 3qlt A: [306385]
        automated match to d3sajd_
        complexed with nag
      2. 2485790Domain d3qltb_: 3qlt B: [306386]
        automated match to d3sajd_
        complexed with nag
    5. Domains for 3qlu:
      1. 2485785Domain d3qluc_: 3qlu C: [306387]
        automated match to d3sajd_
        complexed with cl, gol, nag
      2. 2485786Domain d3qlud_: 3qlu D: [306388]
        automated match to d3sajd_
        complexed with cl, gol, nag
  47. 2485791Ochrobactrum anthropi [TaxId:439375] [273627] (1 PDB entry)
  48. 2485793Oryzias latipes [TaxId:8090] [334713] (5 PDB entries)
    1. Domains for 5x2m:
      1. 2485798Domain d5x2ma_: 5x2m A: [344438]
        Other proteins in same PDB: d5x2mk1, d5x2mk2, d5x2ml1, d5x2ml2
        automated match to d5x2nb_
        complexed with ca, cl, gln, na, nag
      2. 2485799Domain d5x2mb_: 5x2m B: [334766]
        Other proteins in same PDB: d5x2mk1, d5x2mk2, d5x2ml1, d5x2ml2
        automated match to d4xara_
        complexed with ca, cl, gln, na, nag
      3. 2485800Domain d5x2mc_: 5x2m C: [344439]
        Other proteins in same PDB: d5x2mk1, d5x2mk2, d5x2ml1, d5x2ml2
        automated match to d5x2nb_
        complexed with ca, cl, gln, na, nag
      4. 2485801Domain d5x2md1: 5x2m D:21-481 [334793]
        Other proteins in same PDB: d5x2mk1, d5x2mk2, d5x2ml1, d5x2ml2
        automated match to d4xara_
        complexed with ca, cl, gln, na, nag
    2. Domains for 5x2n:
      1. 2485794Domain d5x2na_: 5x2n A: [344440]
        Other proteins in same PDB: d5x2nk1, d5x2nk2, d5x2nl1, d5x2nl2
        automated match to d5x2nb_
        complexed with ala, cl, na, nag
      2. 2485795Domain d5x2nb_: 5x2n B: [334780]
        Other proteins in same PDB: d5x2nk1, d5x2nk2, d5x2nl1, d5x2nl2
        automated match to d4xara_
        complexed with ala, cl, na, nag
      3. 2485796Domain d5x2nc_: 5x2n C: [344441]
        Other proteins in same PDB: d5x2nk1, d5x2nk2, d5x2nl1, d5x2nl2
        automated match to d5x2nb_
        complexed with ala, cl, na, nag
      4. 2485797Domain d5x2nd_: 5x2n D: [334743]
        Other proteins in same PDB: d5x2nk1, d5x2nk2, d5x2nl1, d5x2nl2
        automated match to d4xara_
        complexed with ala, cl, na, nag
    3. Domains for 5x2o:
      1. 2485806Domain d5x2oa_: 5x2o A: [344442]
        Other proteins in same PDB: d5x2ok1, d5x2ok2, d5x2ol1, d5x2ol2
        automated match to d5x2nb_
        complexed with arg, ca, cl, na, nag
      2. 2485807Domain d5x2ob_: 5x2o B: [334744]
        Other proteins in same PDB: d5x2ok1, d5x2ok2, d5x2ol1, d5x2ol2
        automated match to d4xara_
        complexed with arg, ca, cl, na, nag
      3. 2485808Domain d5x2oc_: 5x2o C: [344443]
        Other proteins in same PDB: d5x2ok1, d5x2ok2, d5x2ol1, d5x2ol2
        automated match to d5x2nb_
        complexed with arg, ca, cl, na, nag
      4. 2485809Domain d5x2od_: 5x2o D: [334721]
        Other proteins in same PDB: d5x2ok1, d5x2ok2, d5x2ol1, d5x2ol2
        automated match to d4xara_
        complexed with arg, ca, cl, na, nag
    4. Domains for 5x2p:
      1. 2485810Domain d5x2pa_: 5x2p A: [344444]
        Other proteins in same PDB: d5x2pk1, d5x2pk2, d5x2pl1, d5x2pl2
        automated match to d5x2nb_
        complexed with bma, ca, cl, glu, na, nag
      2. 2485811Domain d5x2pb_: 5x2p B: [334725]
        Other proteins in same PDB: d5x2pk1, d5x2pk2, d5x2pl1, d5x2pl2
        automated match to d4xara_
        complexed with bma, ca, cl, glu, na, nag
      3. 2485812Domain d5x2pc_: 5x2p C: [344445]
        Other proteins in same PDB: d5x2pk1, d5x2pk2, d5x2pl1, d5x2pl2
        automated match to d5x2nb_
        complexed with bma, ca, cl, glu, na, nag
      4. 2485813Domain d5x2pd_: 5x2p D: [334714]
        Other proteins in same PDB: d5x2pk1, d5x2pk2, d5x2pl1, d5x2pl2
        automated match to d4xara_
        complexed with bma, ca, cl, glu, na, nag
    5. Domains for 5x2q:
      1. 2485802Domain d5x2qa_: 5x2q A: [344446]
        Other proteins in same PDB: d5x2qk1, d5x2qk2, d5x2ql1, d5x2ql2
        automated match to d5x2nb_
        complexed with bma, ca, cl, gly, na, nag
      2. 2485803Domain d5x2qb_: 5x2q B: [334741]
        Other proteins in same PDB: d5x2qk1, d5x2qk2, d5x2ql1, d5x2ql2
        automated match to d4xara_
        complexed with bma, ca, cl, gly, na, nag
      3. 2485804Domain d5x2qc_: 5x2q C: [344447]
        Other proteins in same PDB: d5x2qk1, d5x2qk2, d5x2ql1, d5x2ql2
        automated match to d5x2nb_
        complexed with bma, ca, cl, gly, na, nag
      4. 2485805Domain d5x2qd_: 5x2q D: [334776]
        Other proteins in same PDB: d5x2qk1, d5x2qk2, d5x2ql1, d5x2ql2
        automated match to d4xara_
        complexed with bma, ca, cl, gly, na, nag
  49. 2485814Rhizobium etli [TaxId:347834] [232922] (1 PDB entry)
  50. 2485817Rhodobacter sphaeroides [TaxId:272943] [196489] (1 PDB entry)
  51. 2485822Rhodobacter sphaeroides [TaxId:349102] [196798] (1 PDB entry)
  52. 2485825Rhodococcus jostii [TaxId:101510] [196515] (1 PDB entry)
  53. 2485828Rhodopseudomonas palustris [TaxId:1076] [255983] (3 PDB entries)
    1. Domain for 3n0x:
    2. Domains for 3nnd:
      1. 2485831Domain d3nnda1: 3nnd A:14-366 [247973]
        Other proteins in same PDB: d3nnda2
        automated match to d4n0qa_
      2. 2485832Domain d3nndb_: 3nnd B: [247974]
        Other proteins in same PDB: d3nnda2
        automated match to d4n0qa_
      3. 2485833Domain d3nndc_: 3nnd C: [247975]
        Other proteins in same PDB: d3nnda2
        automated match to d4n0qa_
      4. 2485834Domain d3nndd_: 3nnd D: [247976]
        Other proteins in same PDB: d3nnda2
        automated match to d4n0qa_
    3. Domain for 3tx6:
  54. 2485835Rhodopseudomonas palustris [TaxId:258594] [311390] (1 PDB entry)
  55. 2485837Rhodopseudomonas palustris [TaxId:316057] [267894] (8 PDB entries)
    1. Domain for 3snr:
    2. Domain for 3uk0:
    3. Domain for 3ukj:
    4. Domain for 4eyo:
    5. Domain for 4eyq:
    6. Domain for 4f8j:
    7. Domain for 4fb4:
    8. Domain for 4jb0:
  56. 2485846Rhodopseudomonas palustris [TaxId:316058] [256081] (3 PDB entries)
    1. Domain for 3sg0:
    2. Domain for 3t23:
    3. Domain for 4dqd:
  57. 2485850Rhodospirillum rubrum [TaxId:269796] [255869] (1 PDB entry)
  58. 2485852Sanguibacter keddieii [TaxId:446469] [197268] (1 PDB entry)
  59. 2485855Silicibacter pomeroyi [TaxId:89184] [255808] (1 PDB entry)
  60. 2485860Staphylococcus aureus [TaxId:158878] [232454] (1 PDB entry)
  61. 2485863Staphylococcus haemolyticus [TaxId:279808] [255868] (1 PDB entry)
  62. 2485868Staphylococcus saprophyticus [TaxId:342451] [225319] (2 PDB entries)
    1. Domains for 2qu7:
      1. 2485871Domain d2qu7a_: 2qu7 A: [205887]
        automated match to d4kmra_
        complexed with cl
      2. 2485872Domain d2qu7b_: 2qu7 B: [205888]
        automated match to d4kmra_
        complexed with cl
    2. Domains for 3e61:
      1. 2485869Domain d3e61a1: 3e61 A:61-320 [245798]
        Other proteins in same PDB: d3e61a2
        automated match to d2rgya_
        complexed with gol
      2. 2485870Domain d3e61b_: 3e61 B: [245799]
        Other proteins in same PDB: d3e61a2
        automated match to d2rgya_
        complexed with gol
  63. 2485873Streptococcus pneumoniae [TaxId:637987] [234486] (1 PDB entry)
  64. 2485875Thermotoga maritima [TaxId:2336] [255200] (2 PDB entries)
    1. Domains for 2h3h:
      1. 2485876Domain d2h3ha1: 2h3h A:1-305 [262207]
        Other proteins in same PDB: d2h3ha2
        automated match to d2h3hb_
        complexed with bgc
      2. 2485877Domain d2h3hb_: 2h3h B: [242000]
        Other proteins in same PDB: d2h3ha2
        automated match to d2fn8a_
        complexed with bgc
    2. Domain for 3td9:
  65. 2485879Thermotoga maritima [TaxId:243274] [187722] (4 PDB entries)
    1. Domain for 2fn8:
    2. Domains for 2fn9:
      1. 2485880Domain d2fn9a_: 2fn9 A: [164441]
        automated match to d1dbpa_
      2. 2485881Domain d2fn9b_: 2fn9 B: [164442]
        automated match to d1dbpa_
    3. Domains for 2qvc:
      1. 2485886Domain d2qvca1: 2qvc A:33-333 [243648]
        Other proteins in same PDB: d2qvca2, d2qvcb2, d2qvcc2, d2qvcd2
        automated match to d2fn8a_
        complexed with bgc
      2. 2485887Domain d2qvcb1: 2qvc B:33-333 [243649]
        Other proteins in same PDB: d2qvca2, d2qvcb2, d2qvcc2, d2qvcd2
        automated match to d2fn8a_
        complexed with bgc
      3. 2485888Domain d2qvcc1: 2qvc C:33-333 [243650]
        Other proteins in same PDB: d2qvca2, d2qvcb2, d2qvcc2, d2qvcd2
        automated match to d2fn8a_
        complexed with bgc
      4. 2485889Domain d2qvcd1: 2qvc D:33-333 [243651]
        Other proteins in same PDB: d2qvca2, d2qvcb2, d2qvcc2, d2qvcd2
        automated match to d2fn8a_
        complexed with bgc
    4. Domains for 3c6q:
      1. 2485882Domain d3c6qa_: 3c6q A: [245461]
        automated match to d2fn8a_
        complexed with xyp
      2. 2485883Domain d3c6qb_: 3c6q B: [245462]
        automated match to d2fn8a_
        complexed with xyp
      3. 2485884Domain d3c6qc_: 3c6q C: [245463]
        automated match to d2fn8a_
        complexed with xyp
      4. 2485885Domain d3c6qd_: 3c6q D: [245464]
        automated match to d2fn8a_
        complexed with xyp
  66. 2485891Thermus thermophilus [TaxId:274] [230757] (1 PDB entry)
  67. 2485893Verminephrobacter eiseniae [TaxId:391735] [268821] (1 PDB entry)
  68. 2485896Vibrio parahaemolyticus [TaxId:670] [225484] (1 PDB entry)
  69. 2485899Weissella paramesenteroides [TaxId:585506] [260797] (2 PDB entries)
    1. Domains for 4rk6:
      1. 2485900Domain d4rk6a_: 4rk6 A: [263882]
        automated match to d4rk0d_
        complexed with glc
      2. 2485901Domain d4rk6b_: 4rk6 B: [260798]
        automated match to d2nzug_
        complexed with glc
    2. Domains for 4rk7:
      1. 2485902Domain d4rk7a_: 4rk7 A: [267391]
        automated match to d4rk0d_
        complexed with suc
      2. 2485903Domain d4rk7b_: 4rk7 B: [267392]
        automated match to d4rk0d_
        complexed with suc
  70. 2485904Yersinia pestis [TaxId:1035377] [268812] (1 PDB entry)
  71. 3050094Lactobacillus paracasei [TaxId:321967] [350156] (1 PDB entry)

More info for Protein automated matches from c.93.1.0: automated matches

Timeline for Protein automated matches from c.93.1.0: automated matches: