Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2575216Class f: Membrane and cell surface proteins and peptides [56835] (60 folds)
  3. 2577537Fold f.19: Aquaporin-like [81339] (1 superfamily)
    core: 8 helices, 2 short helices are surrounded by 6 long transmembrane helices
  4. 2577538Superfamily f.19.1: Aquaporin-like [81338] (2 families) (S)
  5. 2577589Family f.19.1.0: automated matches [191436] (1 protein)
    not a true family
  6. 2577590Protein automated matches [190629] (7 species)
    not a true protein

Species:

  1. 2577591Archaeoglobus fulgidus [TaxId:2234] [255977] (1 PDB entry)
  2. 2577600Human (Homo sapiens) [TaxId:9606] [225512] (6 PDB entries)
    1. Domains for 3d9s:
      1. 2577602Domain d3d9sa1: 3d9s A:2-245 [209046]
        Other proteins in same PDB: d3d9sa2, d3d9sb2, d3d9sd2
        automated match to d1j4na_
        complexed with ps6
      2. 2577603Domain d3d9sb1: 3d9s B:2-245 [209047]
        Other proteins in same PDB: d3d9sa2, d3d9sb2, d3d9sd2
        automated match to d1j4na_
        complexed with ps6
      3. 2577604Domain d3d9sc_: 3d9s C: [209048]
        Other proteins in same PDB: d3d9sa2, d3d9sb2, d3d9sd2
        automated match to d1j4na_
        complexed with ps6
      4. 2577605Domain d3d9sd1: 3d9s D:2-245 [209049]
        Other proteins in same PDB: d3d9sa2, d3d9sb2, d3d9sd2
        automated match to d1j4na_
        complexed with ps6
    2. Domain for 3gd8:
    3. Domains for 4nef:
      1. 2577606Domain d4nefa1: 4nef A:3-240 [257138]
        Other proteins in same PDB: d4nefa2, d4nefd2
        automated match to d3d9sa_
        complexed with cd, zn
      2. 2577607Domain d4nefb_: 4nef B: [263129]
        Other proteins in same PDB: d4nefa2, d4nefd2
        automated match to d3d9sa_
        complexed with cd, zn
      3. 2577608Domain d4nefc_: 4nef C: [263130]
        Other proteins in same PDB: d4nefa2, d4nefd2
        automated match to d3d9sa_
        complexed with cd, zn
      4. 2577609Domain d4nefd1: 4nef D:3-233 [261508]
        Other proteins in same PDB: d4nefa2, d4nefd2
        automated match to d3d9sa_
        complexed with cd, zn
    4. Domain for 4oj2:
    5. Domains for 5c5x:
      1. 2577610Domain d5c5xa_: 5c5x A: [279679]
        automated match to d3d9sa_
        complexed with ps6; mutant
      2. 2577611Domain d5c5xb_: 5c5x B: [279677]
        automated match to d3d9sa_
        complexed with ps6; mutant
      3. 2577612Domain d5c5xc_: 5c5x C: [279678]
        automated match to d3d9sa_
        complexed with ps6; mutant
      4. 2577613Domain d5c5xd_: 5c5x D: [279681]
        automated match to d3d9sa_
        complexed with ps6; mutant
      5. 2577614Domain d5c5xe_: 5c5x E: [279683]
        automated match to d3d9sa_
        complexed with ps6; mutant
      6. 2577615Domain d5c5xf_: 5c5x F: [279684]
        automated match to d3d9sa_
        complexed with ps6; mutant
      7. 2577616Domain d5c5xg_: 5c5x G: [279682]
        automated match to d3d9sa_
        complexed with ps6; mutant
      8. 2577617Domain d5c5xh_: 5c5x H: [279680]
        automated match to d3d9sa_
        complexed with ps6; mutant
    6. Domains for 6f7h:
      1. 3060327Domain d6f7hd_: 6f7h D: [360389]
        automated match to d1ldfa_
        complexed with bng, gol
      2. 3060352Domain d6f7ha_: 6f7h A: [360414]
        automated match to d1ldfa_
        complexed with bng, gol
      3. 3060362Domain d6f7hb_: 6f7h B: [360424]
        automated match to d1ldfa_
        complexed with bng, gol
      4. 3060390Domain d6f7hc_: 6f7h C: [360452]
        automated match to d1ldfa_
        complexed with bng, gol
  3. 2577619Methanothermobacter marburgensis [TaxId:79929] [187676] (2 PDB entries)
    1. Domain for 2evu:
    2. Domain for 2f2b:
  4. 2577622Norway rat (Rattus norvegicus) [TaxId:10116] [255737] (1 PDB entry)
  5. 2577624Plasmodium falciparum [188442] (1 PDB entry)
  6. 2577626Sheep (Ovis aries) [TaxId:9940] [225889] (1 PDB entry)
  7. 2577628Spinach (Spinacia oleracea) [TaxId:3562] [255773] (6 PDB entries)
    1. Domains for 1z98:
      1. 2577630Domain d1z98a_: 1z98 A: [264230]
        automated match to d4ia4c_
        complexed with cd
      2. 2577631Domain d1z98m_: 1z98 M: [264231]
        automated match to d4ia4c_
        complexed with cd
    2. Domain for 3cll:
    3. Domain for 3cn5:
    4. Domains for 3cn6:
      1. 2577641Domain d3cn6a_: 3cn6 A: [245510]
        automated match to d3m9ia_
        complexed with cd; mutant
      2. 2577642Domain d3cn6b_: 3cn6 B: [245511]
        automated match to d3m9ia_
        complexed with cd; mutant
    5. Domains for 4ia4:
      1. 2577643Domain d4ia4a_: 4ia4 A: [252601]
        automated match to d3m9ia_
        complexed with hg
      2. 2577644Domain d4ia4b_: 4ia4 B: [252602]
        automated match to d3m9ia_
        complexed with hg
      3. 2577645Domain d4ia4c_: 4ia4 C: [252603]
        automated match to d3m9ia_
        complexed with hg
      4. 2577646Domain d4ia4d_: 4ia4 D: [252604]
        automated match to d3m9ia_
        complexed with hg
    6. Domains for 4jc6:
      1. 2577633Domain d4jc6a_: 4jc6 A: [266468]
        automated match to d4ia4c_
        complexed with bog, cd, hg
      2. 2577634Domain d4jc6b_: 4jc6 B: [266469]
        automated match to d4ia4c_
        complexed with bog, cd, hg
      3. 2577635Domain d4jc6c_: 4jc6 C: [266470]
        automated match to d4ia4c_
        complexed with bog, cd, hg
      4. 2577636Domain d4jc6d_: 4jc6 D: [266471]
        automated match to d4ia4c_
        complexed with bog, cd, hg
      5. 2577637Domain d4jc6h_: 4jc6 H: [266472]
        automated match to d4ia4c_
        complexed with bog, cd, hg
      6. 2577638Domain d4jc6j_: 4jc6 J: [266473]
        automated match to d4ia4c_
        complexed with bog, cd, hg
      7. 2577639Domain d4jc6l_: 4jc6 L: [266474]
        automated match to d4ia4c_
        complexed with bog, cd, hg
      8. 2577640Domain d4jc6n_: 4jc6 N: [266475]
        automated match to d4ia4c_
        complexed with bog, cd, hg

More info for Protein automated matches from f.19.1.0: automated matches

Timeline for Protein automated matches from f.19.1.0: automated matches: