Species:

1. Blood fluke (Schistosoma mansoni) [TaxId:6183] [267991] (10 PDB entries)

   1. Domains for 4q3p:

      1. Domain d4q3pa_: 4q3p A: [308072] automated match to d4q3ud_ complexed with gol, mn

      2. Domain d4q3pb_: 4q3p B: [308073] automated match to d4q3ud_ complexed with gol, mn

      3. Domain d4q3pc_: 4q3p C: [308074] automated match to d4q3ud_ complexed with gol, mn

      4. Domain d4q3pd_: 4q3p D: [308075] automated match to d4q3ud_ complexed with gol, mn

   2. Domains for 4q3q:

      1. Domain d4q3qa_: 4q3q A: [308076] automated match to d4q3ud_ complexed with abh, gol, mn

      2. Domain d4q3qb_: 4q3q B: [308077] automated match to d4q3ud_ complexed with abh, gol, mn

      3. Domain d4q3qc_: 4q3q C: [308078] automated match to d4q3ud_ complexed with abh, gol, mn

      4. Domain d4q3qd_: 4q3q D: [308079] automated match to d4q3ud_ complexed with abh, gol, mn

   3. Domains for 4q3r:

      1. Domain d4q3ra_: 4q3r A: [300371] automated match to d4q3ud_ complexed with cl, cs, gol, mn, pge, xa2

      2. Domain d4q3rb_: 4q3r B: [300372] automated match to d4q3ud_ complexed with cl, cs, gol, mn, pge, xa2

      3. Domain d4q3rc_: 4q3r C: [300373] automated match to d4q3ud_ complexed with cl, cs, gol, mn, pge, xa2

      4. Domain d4q3rd_: 4q3r D: [267262] automated match to d4hzea_ complexed with cl, cs, gol, mn, pge, xa2

   4. Domains for 4q3s:

      1. Domain d4q3sa_: 4q3s A: [308080] automated match to d4q3ud_ complexed with gol, mn, x7a

      2. Domain d4q3sb_: 4q3s B: [308081] automated match to d4q3ud_ complexed with gol, mn, x7a

      3. Domain d4q3sc_: 4q3s C: [308082] automated match to d4q3ud_ complexed with gol, mn, x7a

      4. Domain d4q3sd_: 4q3s D: [308083] automated match to d4q3ud_ complexed with gol, mn, x7a

   5. Domains for 4q3t:

      1. Domain d4q3ta_: 4q3t A: [308084] automated match to d4q3ud_ complexed with gol, har, mn

      2. Domain d4q3tb_: 4q3t B: [308085] automated match to d4q3ud_ complexed with gol, har, mn

      3. Domain d4q3tc_: 4q3t C: [308086] automated match to d4q3ud_ complexed with gol, har, mn

      4. Domain d4q3td_: 4q3t D: [308087] automated match to d4q3ud_ complexed with gol, har, mn

   6. Domains for 4q3u:

      1. Domain d4q3ua_: 4q3u A: [300374] automated match to d4q3ud_ complexed with gol, mn, nnh

      2. Domain d4q3ub_: 4q3u B: [300375] automated match to d4q3ud_ complexed with gol, mn, nnh

      3. Domain d4q3uc_: 4q3u C: [300376] automated match to d4q3ud_ complexed with gol, mn, nnh

      4. Domain d4q3ud_: 4q3u D: [267263] automated match to d4hzea_ complexed with gol, mn, nnh

   7. Domains for 4q3v:

      1. Domain d4q3va_: 4q3v A: [308088] automated match to d4q3ud_ complexed with gol, mn, s2c

      2. Domain d4q3vb_: 4q3v B: [308089] automated match to d4q3ud_ complexed with gol, mn, s2c

      3. Domain d4q3vc_: 4q3v C: [308090] automated match to d4q3ud_ complexed with gol, mn, s2c

      4. Domain d4q3vd_: 4q3v D: [308091] automated match to d4q3ud_ complexed with gol, mn, s2c

   8. Domains for 4q40:

      1. Domain d4q40a_: 4q40 A: [308096] automated match to d4q3ud_ complexed with gol, imd, mn, val

      2. Domain d4q40b_: 4q40 B: [308097] automated match to d4q3ud_ complexed with gol, imd, mn, val

      3. Domain d4q40c_: 4q40 C: [308098] automated match to d4q3ud_ complexed with gol, imd, mn, val

      4. Domain d4q40d_: 4q40 D: [308099] automated match to d4q3ud_ complexed with gol, imd, mn, val

   9. Domains for 4q41:

      1. Domain d4q41a_: 4q41 A: [308100] automated match to d4q3ud_ complexed with gol, lys, mn

      2. Domain d4q41b_: 4q41 B: [308101] automated match to d4q3ud_ complexed with gol, lys, mn

      3. Domain d4q41c_: 4q41 C: [308102] automated match to d4q3ud_ complexed with gol, lys, mn

      4. Domain d4q41d_: 4q41 D: [308103] automated match to d4q3ud_ complexed with gol, lys, mn

   10. Domains for 4q42:

       1. Domain d4q42a_: 4q42 A: [308104] automated match to d4q3ud_ complexed with gol, mn, orn

       2. Domain d4q42b_: 4q42 B: [308105] automated match to d4q3ud_ complexed with gol, mn, orn

       3. Domain d4q42c_: 4q42 C: [308106] automated match to d4q3ud_ complexed with gol, mn, orn

       4. Domain d4q42d_: 4q42 D: [308107] automated match to d4q3ud_ complexed with gol, mn, orn

2. Clostridium difficile [TaxId:272563] [225843] (1 PDB entry)

   • Domain for 3lhl:

     • Domain d3lhla_: 3lhl A: [212889] automated match to d2ceva_ complexed with mn, mpd, po4

3. Danio rerio [TaxId:7955] [319911] (19 PDB entries)

   1. Domains for 5eef:

      1. Domain d5eefa1: 5eef A:60-417 [319960] Other proteins in same PDB: d5eefa2, d5eefb2 automated match to d3c10b_ complexed with edo, nh4, so4, tsn, zn

      2. Domain d5eefb1: 5eef B:60-417 [320009] Other proteins in same PDB: d5eefa2, d5eefb2 automated match to d3c10b_ complexed with edo, nh4, so4, tsn, zn

   2. Domains for 5eei:

      1. Domain d5eeia_: 5eei A: [319974] automated match to d3c10c_ complexed with cl, edo, gol, k, mg, shh, zn

      2. Domain d5eeib_: 5eei B: [319958] automated match to d3c10c_ complexed with cl, edo, gol, k, mg, shh, zn

   3. Domain for 5eek:

      • Domain d5eeka_: 5eek A: [319975] automated match to d3c10c_ complexed with cl, edo, gol, iod, k, nh4, tsn, zn

   4. Domains for 5eem:

      1. Domain d5eema_: 5eem A: [319981] automated match to d3c10c_ complexed with fmt, k, na, zn

      2. Domain d5eemb_: 5eem B: [319914] automated match to d3c10c_ complexed with fmt, k, na, zn

   5. Domains for 5een:

      1. Domain d5eena_: 5een A: [319920] automated match to d3c10c_ complexed with 5og, cl, k, zn

      2. Domain d5eenb_: 5een B: [319924] automated match to d3c10c_ complexed with 5og, cl, k, zn

   6. Domains for 5ef7:

      1. Domain d5ef7a_: 5ef7 A: [320023] automated match to d3c10c_ complexed with 5oj, k, zn

      2. Domain d5ef7b_: 5ef7 B: [320051] automated match to d3c10c_ complexed with 5oj, k, zn

   7. Domains for 5ef8:

      1. Domain d5ef8a_: 5ef8 A: [319972] automated match to d3c10c_ complexed with edo, gol, k, lbh, zn

      2. Domain d5ef8b_: 5ef8 B: [320050] automated match to d3c10c_ complexed with edo, gol, k, lbh, zn

   8. Domain for 5efb:

      • Domain d5efbd_: 5efb D: [319912] automated match to d3c10c_ complexed with 5ok, k, zn

   9. Domains for 5efg:

      1. Domain d5efga_: 5efg A: [319969] automated match to d3c10c_ complexed with act, k, zn

      2. Domain d5efgd_: 5efg D: [319942] automated match to d3c10c_ complexed with act, k, zn

   10. Domains for 5efh:

       1. Domain d5efha_: 5efh A: [319985] automated match to d3c10c_ complexed with br, edo, fks, gol, k, zn

       2. Domain d5efhd_: 5efh D: [319993] automated match to d3c10c_ complexed with br, edo, fks, gol, k, zn

   11. Domain for 5efj:

       • Domain d5efjd_: 5efj D: [320000] automated match to d3c10c_ complexed with edo, gol, k, no3, zn

   12. Domain for 5efk:

       • Domain d5efkb_: 5efk B: [319929] automated match to d3c10c_ complexed with edo, gol, k, mcm, no3, peg, zn; mutant

   13. Domain for 5g0g:

       • Domain d5g0ga_: 5g0g A: [320081] automated match to d3c10b_ complexed with cl, na, tsn, zn

   14. Domain for 5g0h:

       • Domain d5g0ha_: 5g0h A: [320199] automated match to d3c10c_ complexed with e1z, edo, k, zn

   15. Domains for 5g0i:

       1. Domain d5g0ia1: 5g0i A:58-419 [319962] automated match to d3c10c_ complexed with cl, edo, k, n4r, zn

       2. Domain d5g0ia2: 5g0i A:442-801 [319963] automated match to d3c10c_ complexed with cl, edo, k, n4r, zn

       3. Domain d5g0ib1: 5g0i B:59-418 [320069] automated match to d3c10c_ complexed with cl, edo, k, n4r, zn

       4. Domain d5g0ib2: 5g0i B:442-801 [320070] automated match to d3c10c_ complexed with cl, edo, k, n4r, zn

   16. Domain for 5wgi:

       • Domain d5wgia1: 5wgi A:440-798 [342516] Other proteins in same PDB: d5wgia2 automated match to d3c10c_ complexed with cl, edo, gol, k, mg, peg, tsn, zn

   17. Domain for 5wgk:

       • Domain d5wgka_: 5wgk A: [342495] automated match to d3c10c_ complexed with agj, edo, iod, k, peg, zn

   18. Domains for 5wgl:

       1. Domain d5wgla_: 5wgl A: [342628] automated match to d3c10c_ complexed with ah4, edo, flc, k, peg, zn

       2. Domain d5wglb_: 5wgl B: [342477] automated match to d3c10c_ complexed with ah4, edo, flc, k, peg, zn

   19. Domains for 5wgm:

       1. Domain d5wgma1: 5wgm A:440-798 [342525] Other proteins in same PDB: d5wgma2, d5wgmb2, d5wgmc2 automated match to d3c10c_ complexed with ah7, edo, k, peg, pge, zn

       2. Domain d5wgmb1: 5wgm B:440-798 [342473] Other proteins in same PDB: d5wgma2, d5wgmb2, d5wgmc2 automated match to d3c10c_ complexed with ah7, edo, k, peg, pge, zn

       3. Domain d5wgmc1: 5wgm C:440-798 [342561] Other proteins in same PDB: d5wgma2, d5wgmb2, d5wgmc2 automated match to d3c10c_ complexed with ah7, edo, k, peg, pge, zn

4. Pseudomonas aeruginosa, PA01 [TaxId:208964] [189976] (3 PDB entries)

   1. Domains for 3nio:

      1. Domain d3nioa_: 3nio A: [182322] automated match to d1gq6a_ complexed with mn

      2. Domain d3niob_: 3nio B: [182323] automated match to d1gq6a_ complexed with mn

      3. Domain d3nioc_: 3nio C: [182324] automated match to d1gq6a_ complexed with mn

      4. Domain d3niod_: 3nio D: [182325] automated match to d1gq6a_ complexed with mn

      5. Domain d3nioe_: 3nio E: [182326] automated match to d1gq6a_ complexed with mn

      6. Domain d3niof_: 3nio F: [182327] automated match to d1gq6a_ complexed with mn

   2. Domains for 3nip:

      1. Domain d3nipa_: 3nip A: [247937] automated match to d1gq6a_ complexed with 16d

      2. Domain d3nipb_: 3nip B: [247938] automated match to d1gq6a_ complexed with 16d

      3. Domain d3nipc_: 3nip C: [247939] automated match to d1gq6a_ complexed with 16d

      4. Domain d3nipd_: 3nip D: [247940] automated match to d1gq6a_ complexed with 16d

      5. Domain d3nipe_: 3nip E: [247941] automated match to d1gq6a_ complexed with 16d

      6. Domain d3nipf_: 3nip F: [247942] automated match to d1gq6a_ complexed with 16d

   3. Domains for 3niq:

      1. Domain d3niqa_: 3niq A: [247943] automated match to d1gq6a_ complexed with gol, mn

      2. Domain d3niqb_: 3niq B: [247944] automated match to d1gq6a_ complexed with gol, mn

5. Thermoplasma volcanium [TaxId:273116] [226060] (1 PDB entry)

   • Domains for 3pzl:

     1. Domain d3pzla_: 3pzl A: [214989] automated match to d2a0ma1 complexed with mn

     2. Domain d3pzlb_: 3pzl B: [214990] automated match to d2a0ma1 complexed with mn

     3. Domain d3pzlc_: 3pzl C: [214991] automated match to d2a0ma1 complexed with mn

6. Thermus thermophilus HB8 [TaxId:300852] [187669] (1 PDB entry)

   • Domains for 2eiv:

     1. Domain d2eiva_: 2eiv A: [164059] automated match to d1ceva_

     2. Domain d2eivc_: 2eiv C: [164060] automated match to d1ceva_

     3. Domain d2eivd_: 2eiv D: [164061] automated match to d1ceva_

     4. Domain d2eive_: 2eiv E: [164062] automated match to d1ceva_

     5. Domain d2eivf_: 2eiv F: [164063] automated match to d1ceva_

     6. Domain d2eivg_: 2eiv G: [164064] automated match to d1ceva_

     7. Domain d2eivh_: 2eiv H: [164065] automated match to d1ceva_

     8. Domain d2eivi_: 2eiv I: [164066] automated match to d1ceva_

     9. Domain d2eivj_: 2eiv J: [164067] automated match to d1ceva_

     10. Domain d2eivk_: 2eiv K: [164068] automated match to d1ceva_

     11. Domain d2eivl_: 2eiv L: [164069] automated match to d1ceva_

     12. Domain d2eivm_: 2eiv M: [164070] automated match to d1ceva_

7. Thermus thermophilus [TaxId:274] [187661] (2 PDB entries)

   1. Domain for 2ef4:

      • Domain d2ef4a_: 2ef4 A: [163966] automated match to d1ceva_

   2. Domains for 2ef5:

      1. Domain d2ef5a_: 2ef5 A: [163967] automated match to d1ceva_ complexed with gai, lys, mn

      2. Domain d2ef5b_: 2ef5 B: [163968] automated match to d1ceva_ complexed with gai, lys, mn

      3. Domain d2ef5d_: 2ef5 D: [163969] automated match to d1ceva_ complexed with gai, lys, mn

      4. Domain d2ef5e_: 2ef5 E: [163970] automated match to d1ceva_ complexed with gai, lys, mn

      5. Domain d2ef5f_: 2ef5 F: [163971] automated match to d1ceva_ complexed with gai, lys, mn

      6. Domain d2ef5g_: 2ef5 G: [163972] automated match to d1ceva_ complexed with gai, lys, mn

8. Trypanosome (Leishmania mexicana) [TaxId:5665] [226579] (7 PDB entries)

   1. Domain for 4ity:

      • Domain d4itya_: 4ity A: [223388] automated match to d1wvaa1 complexed with gol, mn

   2. Domain for 4iu0:

      • Domain d4iu0a_: 4iu0 A: [223389] automated match to d1wvaa1 complexed with abh, gol, mn

   3. Domain for 4iu1:

      • Domain d4iu1a_: 4iu1 A: [223390] automated match to d1wvaa1 complexed with gol, mn, nnh

   4. Domain for 4iu4:

      • Domain d4iu4a_: 4iu4 A: [223391] automated match to d1wvaa1 complexed with bme, gol, mn, s2c

   5. Domain for 4iu5:

      • Domain d4iu5a_: 4iu5 A: [223392] automated match to d1wvaa1 complexed with gol, mn, orn

   6. Domain for 5hj9:

      • Domain d5hj9a_: 5hj9 A: [315605] automated match to d4itya_ complexed with edo, gol, mn, pge, so4, x7a

   7. Domain for 5hja:

      • Domain d5hjaa_: 5hja A: [315402] automated match to d4itya_ complexed with gol, mn, xa2

More info for Protein automated matches from c.42.1.0: automated matches

Timeline for Protein automated matches from c.42.1.0: automated matches:

• Protein automated matches from c.42.1.0: automated matches first appeared in SCOPe 2.01
  
• Protein automated matches from c.42.1.0: automated matches appears in SCOPe 2.05
  
• Protein automated matches from c.42.1.0: automated matches appears in SCOPe 2.07
  
• Protein automated matches from c.42.1.0: automated matches appears in the current release, SCOPe 2.08