Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2556576Fold d.160: Carbon-nitrogen hydrolase [56316] (1 superfamily)
    4 layers: alpha/beta/beta/alpha; mixed beta sheets; contains duplication
  4. 2556577Superfamily d.160.1: Carbon-nitrogen hydrolase [56317] (3 families) (S)
    Pfam PF00795; some topological similarities to the metallo-dependent phosphatases and DNase I-like nucleases
  5. 2556644Family d.160.1.0: automated matches [191429] (1 protein)
    not a true family
  6. 2556645Protein automated matches [190617] (5 species)
    not a true protein

Species:

  1. 2556646Medicago truncatula [TaxId:3880] [316076] (4 PDB entries)
    1. Domains for 5h8i:
      1. 2556647Domain d5h8ia_: 5h8i A: [316780]
        automated match to d5h8ih_
        complexed with edo, gol, n2h, na, peg, pge
      2. 2556648Domain d5h8ib_: 5h8i B: [316781]
        automated match to d5h8ih_
        complexed with edo, gol, n2h, na, peg, pge
      3. 2556649Domain d5h8ic_: 5h8i C: [316782]
        automated match to d5h8ih_
        complexed with edo, gol, n2h, na, peg, pge
      4. 2556650Domain d5h8id_: 5h8i D: [316789]
        automated match to d5h8ih_
        complexed with edo, gol, n2h, na, peg, pge
      5. 2556651Domain d5h8ie_: 5h8i E: [316689]
        automated match to d5h8ih_
        complexed with edo, gol, n2h, na, peg, pge
      6. 2556652Domain d5h8if_: 5h8i F: [316690]
        automated match to d5h8ih_
        complexed with edo, gol, n2h, na, peg, pge
      7. 2556653Domain d5h8ig_: 5h8i G: [316209]
        automated match to d2w1va_
        complexed with edo, gol, n2h, na, peg, pge
      8. 2556654Domain d5h8ih_: 5h8i H: [316202]
        automated match to d2w1va_
        complexed with edo, gol, n2h, na, peg, pge
      9. 2556655Domain d5h8ii_: 5h8i I: [316843]
        automated match to d5h8ih_
        complexed with edo, gol, n2h, na, peg, pge
      10. 2556656Domain d5h8ij_: 5h8i J: [316695]
        automated match to d5h8ih_
        complexed with edo, gol, n2h, na, peg, pge
      11. 2556657Domain d5h8ik_: 5h8i K: [316799]
        automated match to d5h8ih_
        complexed with edo, gol, n2h, na, peg, pge
      12. 2556658Domain d5h8il_: 5h8i L: [316867]
        automated match to d5h8ih_
        complexed with edo, gol, n2h, na, peg, pge
      13. 2556659Domain d5h8im_: 5h8i M: [316794]
        automated match to d5h8ih_
        complexed with edo, gol, n2h, na, peg, pge
      14. 2556660Domain d5h8in_: 5h8i N: [316778]
        automated match to d5h8ih_
        complexed with edo, gol, n2h, na, peg, pge
      15. 2556661Domain d5h8io_: 5h8i O: [316859]
        automated match to d5h8ih_
        complexed with edo, gol, n2h, na, peg, pge
      16. 2556662Domain d5h8ip_: 5h8i P: [316692]
        automated match to d5h8ih_
        complexed with edo, gol, n2h, na, peg, pge
    2. Domains for 5h8j:
      1. 2556663Domain d5h8ja_: 5h8j A: [316205]
        automated match to d2w1va_
        complexed with edo, gol, n2p, peg, pge
      2. 2556664Domain d5h8jb_: 5h8j B: [316872]
        automated match to d5h8ih_
        complexed with edo, gol, n2p, peg, pge
      3. 2556665Domain d5h8jc_: 5h8j C: [316855]
        automated match to d5h8ih_
        complexed with edo, gol, n2p, peg, pge
      4. 2556666Domain d5h8jd_: 5h8j D: [316864]
        automated match to d5h8ih_
        complexed with edo, gol, n2p, peg, pge
      5. 2556667Domain d5h8je_: 5h8j E: [316853]
        automated match to d5h8ih_
        complexed with edo, gol, n2p, peg, pge
      6. 2556668Domain d5h8jf_: 5h8j F: [316851]
        automated match to d5h8ih_
        complexed with edo, gol, n2p, peg, pge
      7. 2556669Domain d5h8jg_: 5h8j G: [316870]
        automated match to d5h8ih_
        complexed with edo, gol, n2p, peg, pge
      8. 2556670Domain d5h8jh_: 5h8j H: [316208]
        automated match to d2w1va_
        complexed with edo, gol, n2p, peg, pge
      9. 2556671Domain d5h8ji_: 5h8j I: [316842]
        automated match to d5h8ih_
        complexed with edo, gol, n2p, peg, pge
      10. 2556672Domain d5h8jj_: 5h8j J: [316837]
        automated match to d5h8ih_
        complexed with edo, gol, n2p, peg, pge
      11. 2556673Domain d5h8jk_: 5h8j K: [316802]
        automated match to d5h8ih_
        complexed with edo, gol, n2p, peg, pge
      12. 2556674Domain d5h8jl_: 5h8j L: [316844]
        automated match to d5h8ih_
        complexed with edo, gol, n2p, peg, pge
      13. 2556675Domain d5h8jm_: 5h8j M: [316810]
        automated match to d5h8ih_
        complexed with edo, gol, n2p, peg, pge
      14. 2556676Domain d5h8jn_: 5h8j N: [316709]
        automated match to d5h8ih_
        complexed with edo, gol, n2p, peg, pge
      15. 2556677Domain d5h8jo_: 5h8j O: [316713]
        automated match to d5h8ih_
        complexed with edo, gol, n2p, peg, pge
      16. 2556678Domain d5h8jp_: 5h8j P: [316715]
        automated match to d5h8ih_
        complexed with edo, gol, n2p, peg, pge
    3. Domains for 5h8k:
      1. 2556695Domain d5h8ka_: 5h8k A: [316719]
        automated match to d5h8lp_
        complexed with edo, gol, peg; mutant
      2. 2556696Domain d5h8kb_: 5h8k B: [316720]
        automated match to d5h8lp_
        complexed with edo, gol, peg; mutant
      3. 2556697Domain d5h8kc_: 5h8k C: [316691]
        automated match to d5h8lp_
        complexed with edo, gol, peg; mutant
      4. 2556698Domain d5h8kd_: 5h8k D: [316693]
        automated match to d5h8lp_
        complexed with edo, gol, peg; mutant
      5. 2556699Domain d5h8ke_: 5h8k E: [316694]
        automated match to d5h8lp_
        complexed with edo, gol, peg; mutant
      6. 2556700Domain d5h8kf_: 5h8k F: [316779]
        automated match to d5h8lp_
        complexed with edo, gol, peg; mutant
      7. 2556701Domain d5h8kg_: 5h8k G: [316086]
        automated match to d2w1va_
        complexed with edo, gol, peg; mutant
      8. 2556702Domain d5h8kh_: 5h8k H: [316088]
        automated match to d2w1va_
        complexed with edo, gol, peg; mutant
      9. 2556703Domain d5h8ki_: 5h8k I: [316704]
        automated match to d5h8lp_
        complexed with edo, gol, peg; mutant
      10. 2556704Domain d5h8kj_: 5h8k J: [316868]
        automated match to d5h8lp_
        complexed with edo, gol, peg; mutant
      11. 2556705Domain d5h8kk_: 5h8k K: [316707]
        automated match to d5h8lp_
        complexed with edo, gol, peg; mutant
      12. 2556706Domain d5h8kl_: 5h8k L: [316708]
        automated match to d5h8lp_
        complexed with edo, gol, peg; mutant
      13. 2556707Domain d5h8km_: 5h8k M: [316869]
        automated match to d5h8lp_
        complexed with edo, gol, peg; mutant
      14. 2556708Domain d5h8kn_: 5h8k N: [316714]
        automated match to d5h8lp_
        complexed with edo, gol, peg; mutant
      15. 2556709Domain d5h8ko_: 5h8k O: [316871]
        automated match to d5h8lp_
        complexed with edo, gol, peg; mutant
      16. 2556710Domain d5h8kp_: 5h8k P: [316849]
        automated match to d5h8lp_
        complexed with edo, gol, peg; mutant
    4. Domains for 5h8l:
      1. 2556679Domain d5h8la_: 5h8l A: [316696]
        automated match to d5h8lp_
        complexed with edo, gol, peg, put; mutant
      2. 2556680Domain d5h8lb_: 5h8l B: [316697]
        automated match to d5h8lp_
        complexed with edo, gol, peg, put; mutant
      3. 2556681Domain d5h8lc_: 5h8l C: [316856]
        automated match to d5h8lp_
        complexed with edo, gol, peg, put; mutant
      4. 2556682Domain d5h8ld_: 5h8l D: [316705]
        automated match to d5h8lp_
        complexed with edo, gol, peg, put; mutant
      5. 2556683Domain d5h8le_: 5h8l E: [316706]
        automated match to d5h8lp_
        complexed with edo, gol, peg, put; mutant
      6. 2556684Domain d5h8lf_: 5h8l F: [316873]
        automated match to d5h8lp_
        complexed with edo, gol, peg, put; mutant
      7. 2556685Domain d5h8lg_: 5h8l G: [316077]
        automated match to d2w1va_
        complexed with edo, gol, peg, put; mutant
      8. 2556686Domain d5h8lh_: 5h8l H: [316120]
        automated match to d2w1va_
        complexed with edo, gol, peg, put; mutant
      9. 2556687Domain d5h8li_: 5h8l I: [316860]
        automated match to d5h8lp_
        complexed with edo, gol, peg, put; mutant
      10. 2556688Domain d5h8lj_: 5h8l J: [316852]
        automated match to d5h8lp_
        complexed with edo, gol, peg, put; mutant
      11. 2556689Domain d5h8lk_: 5h8l K: [316866]
        automated match to d5h8lp_
        complexed with edo, gol, peg, put; mutant
      12. 2556690Domain d5h8ll_: 5h8l L: [316698]
        automated match to d5h8lp_
        complexed with edo, gol, peg, put; mutant
      13. 2556691Domain d5h8lm_: 5h8l M: [316863]
        automated match to d5h8lp_
        complexed with edo, gol, peg, put; mutant
      14. 2556692Domain d5h8ln_: 5h8l N: [316854]
        automated match to d5h8lp_
        complexed with edo, gol, peg, put; mutant
      15. 2556693Domain d5h8lo_: 5h8l O: [316765]
        automated match to d5h8lp_
        complexed with edo, gol, peg, put; mutant
      16. 2556694Domain d5h8lp_: 5h8l P: [316084]
        automated match to d2w1va_
        complexed with edo, gol, peg, put; mutant
  2. 2556711Mouse (Mus musculus) [TaxId:10090] [225581] (1 PDB entry)
  3. 2556714Staphylococcus aureus [TaxId:93062] [226232] (1 PDB entry)
  4. 2556717Xanthomonas campestris pv. campestris [TaxId:340] [187649] (1 PDB entry)
  5. 3058036Helicobacter pylori [TaxId:563041] [358098] (1 PDB entry)

More info for Protein automated matches from d.160.1.0: automated matches

Timeline for Protein automated matches from d.160.1.0: automated matches: