Species:

1. Agrobacterium tumefaciens [TaxId:358] [189552] (1 PDB entry)

   • Domains for 2xyk:

     1. Domain d2xyka_: 2xyk A: [170484] automated match to d1ux8a_ complexed with hem

     2. Domain d2xykb_: 2xyk B: [170485] automated match to d1ux8a_ complexed with hem

2. Campylobacter jejuni [TaxId:197] [187859] (2 PDB entries)

   1. Domains for 2ig3:

      1. Domain d2ig3a_: 2ig3 A: [165538] automated match to d1ux8a_ complexed with act, cyn, hem, so4

      2. Domain d2ig3b_: 2ig3 B: [165539] automated match to d1ux8a_ complexed with act, cyn, hem, so4

   2. Domain for 2wy4:

      • Domain d2wy4a_: 2wy4 A: [169686] automated match to d1vhba_ complexed with cyn, hem

3. Chlamydomonas reinhardtii [TaxId:3055] [269183] (1 PDB entry)

   • Domains for 4xdi:

     1. Domain d4xdia_: 4xdi A: [269184] automated match to d3aq5a_ complexed with hem

     2. Domain d4xdib_: 4xdi B: [269187] automated match to d3aq5a_ complexed with hem

4. Clam (Lucina pectinata) [TaxId:244486] [188300] (7 PDB entries)

   1. Domains for 2olp:

      1. Domain d2olpa_: 2olp A: [166763] automated match to d1b0ba_ complexed with hem, oxy, so4

      2. Domain d2olpb_: 2olp B: [166764] automated match to d1b0ba_ complexed with hem, oxy, so4

   2. Domains for 3pi1:

      1. Domain d3pi1a_: 3pi1 A: [183750] automated match to d1b0ba_ complexed with hem, oxy

      2. Domain d3pi1b_: 3pi1 B: [183751] automated match to d1b0ba_ complexed with hem, oxy

   3. Domains for 3pi2:

      1. Domain d3pi2a_: 3pi2 A: [183752] automated match to d1b0ba_ complexed with ace, fmt, hem, oxy

      2. Domain d3pi2b_: 3pi2 B: [183753] automated match to d1b0ba_ complexed with ace, fmt, hem, oxy

   4. Domains for 3pi3:

      1. Domain d3pi3a_: 3pi3 A: [183754] automated match to d1b0ba_ complexed with hem, oxy

      2. Domain d3pi3b_: 3pi3 B: [183755] automated match to d1b0ba_ complexed with hem, oxy

   5. Domains for 3pi4:

      1. Domain d3pi4a_: 3pi4 A: [248504] automated match to d3pt8a_ complexed with hem

      2. Domain d3pi4b_: 3pi4 B: [248505] automated match to d3pt8a_ complexed with hem

   6. Domains for 3pt7:

      1. Domain d3pt7a_: 3pt7 A: [183966] automated match to d1b0ba_ complexed with gol, hem, oxy

      2. Domain d3pt7b_: 3pt7 B: [196096] automated match to d3pt8a_ complexed with gol, hem, oxy

   7. Domains for 3pt8:

      1. Domain d3pt8a_: 3pt8 A: [183967] automated match to d1b0ba_ complexed with cyn, fmt, gol, hem

      2. Domain d3pt8b_: 3pt8 B: [196095] automated match to d3pt8a_ complexed with cyn, fmt, gol, hem

5. Fasciola hepatica [TaxId:6192] [188561] (1 PDB entry)

   • Domain for 2vyw:

     • Domain d2vywa_: 2vyw A: [168937] automated match to d1h97a_ complexed with hem, oxy

6. Fruit fly (Drosophila melanogaster) [TaxId:7227] [187733] (2 PDB entries)

   1. Domain for 2bk9:

      • Domain d2bk9a_: 2bk9 A: [193844] automated match to d2g3ha_ complexed with cl, cxs, hem, mg

   2. Domain for 2g3h:

      • Domain d2g3ha_: 2g3h A: [164573] automated match to d1ecaa_ complexed with cl, cyn, hem, mg

7. Gasterophilus intestinalis [TaxId:84525] [193835] (1 PDB entry)

   • Domains for 2c0k:

     1. Domain d2c0ka_: 2c0k A: [197823] automated match to d2c0kb_ complexed with hem, oxy

     2. Domain d2c0kb_: 2c0k B: [193836] automated match to d2g3ha_ complexed with hem, oxy

8. Lamellibrachia satsuma [TaxId:104711] [256471] (4 PDB entries)

   1. Domains for 3wct:

      1. Domain d3wcta_: 3wct A: [256472] automated match to d1yhua_ complexed with ca, hem, oxy

      2. Domain d3wctb_: 3wct B: [256473] automated match to d1x9fb_ complexed with ca, hem, oxy

      3. Domain d3wctc_: 3wct C: [256474] automated match to d2zs0c_ complexed with ca, hem, oxy

      4. Domain d3wctd_: 3wct D: [256475] automated match to d2zs0c_ complexed with ca, hem, oxy

      5. Domain d3wcte_: 3wct E: [258855] automated match to d1yhua_ complexed with ca, hem, oxy

      6. Domain d3wctf_: 3wct F: [258851] automated match to d1x9fb_ complexed with ca, hem, oxy

      7. Domain d3wctg_: 3wct G: [258847] automated match to d2zs0c_ complexed with ca, hem, oxy

      8. Domain d3wcth_: 3wct H: [258853] automated match to d2zs0c_ complexed with ca, hem, oxy

   2. Domains for 3wcu:

      1. Domain d3wcua_: 3wcu A: [258859] automated match to d1yhua_ complexed with ca, hem

      2. Domain d3wcub_: 3wcu B: [258860] automated match to d1x9fb_ complexed with ca, hem

      3. Domain d3wcuc_: 3wcu C: [258854] automated match to d2zs0c_ complexed with ca, hem

      4. Domain d3wcud_: 3wcu D: [258870] automated match to d2zs0c_ complexed with ca, hem

      5. Domain d3wcue_: 3wcu E: [258869] automated match to d1yhua_ complexed with ca, hem

      6. Domain d3wcuf_: 3wcu F: [258871] automated match to d1x9fb_ complexed with ca, hem

      7. Domain d3wcug_: 3wcu G: [258861] automated match to d2zs0c_ complexed with ca, hem

      8. Domain d3wcuh_: 3wcu H: [258862] automated match to d2zs0c_ complexed with ca, hem

   3. Domains for 3wcv:

      1. Domain d3wcva_: 3wcv A: [262388] automated match to d3wcta_ complexed with ca, hem, oxy

      2. Domain d3wcvb_: 3wcv B: [258867] automated match to d1x9fb_ complexed with ca, hem, oxy

      3. Domain d3wcvc_: 3wcv C: [258864] automated match to d2zs0c_ complexed with ca, hem, oxy

      4. Domain d3wcvd_: 3wcv D: [258868] automated match to d2zs0c_ complexed with ca, hem, oxy

      5. Domain d3wcve_: 3wcv E: [258872] automated match to d1yhua_ complexed with ca, hem, oxy

      6. Domain d3wcvf_: 3wcv F: [262389] automated match to d3wctb_ complexed with ca, hem, oxy

      7. Domain d3wcvg_: 3wcv G: [258863] automated match to d2zs0c_ complexed with ca, hem, oxy

      8. Domain d3wcvh_: 3wcv H: [258865] automated match to d2zs0c_ complexed with ca, hem, oxy

   4. Domains for 3wcw:

      1. Domain d3wcwa_: 3wcw A: [258852] automated match to d1yhua_ complexed with hem, mg, oxy

      2. Domain d3wcwb_: 3wcw B: [258850] automated match to d1x9fb_ complexed with hem, mg, oxy

      3. Domain d3wcwc_: 3wcw C: [258846] automated match to d2zs0c_ complexed with hem, mg, oxy

      4. Domain d3wcwd_: 3wcw D: [258857] automated match to d2zs0c_ complexed with hem, mg, oxy

      5. Domain d3wcwe_: 3wcw E: [258856] automated match to d1yhua_ complexed with hem, mg, oxy

      6. Domain d3wcwf_: 3wcw F: [258849] automated match to d1x9fb_ complexed with hem, mg, oxy

      7. Domain d3wcwg_: 3wcw G: [258858] automated match to d2zs0c_ complexed with hem, mg, oxy

      8. Domain d3wcwh_: 3wcw H: [258848] automated match to d2zs0c_ complexed with hem, mg, oxy

9. Methylacidiphilum infernorum [TaxId:481448] [195689] (5 PDB entries)

   1. Domains for 3s1i:

      1. Domain d3s1ia_: 3s1i A: [216165] automated match to d2zlua_ complexed with hem, oxy, so4

      2. Domain d3s1ib_: 3s1i B: [216166] automated match to d2zlua_ complexed with hem, oxy, so4

      3. Domain d3s1ic_: 3s1i C: [216167] automated match to d2zlua_ complexed with hem, oxy, so4

   2. Domains for 3s1j:

      1. Domain d3s1ja_: 3s1j A: [216168] automated match to d2zlua_ complexed with act, hem, so4

      2. Domain d3s1jb_: 3s1j B: [216169] automated match to d2zlua_ complexed with act, hem, so4

      3. Domain d3s1jc_: 3s1j C: [216170] automated match to d2zlua_ complexed with act, hem, so4

   3. Domains for 3ubc:

      1. Domain d3ubca_: 3ubc A: [195690] automated match to d1oj6b_ complexed with hem, oxy

      2. Domain d3ubcd_: 3ubc D: [200966] automated match to d3ubca_ complexed with hem, oxy

      3. Domain d3ubcg_: 3ubc G: [200967] automated match to d3ubca_ complexed with hem, oxy

   4. Domain for 3wfw:

      • Domain d3wfwa_: 3wfw A: [258874] automated match to d2gdma_ complexed with hem, mpd

   5. Domains for 3wfx:

      1. Domain d3wfxa_: 3wfx A: [258875] automated match to d2gdma_ complexed with hem, hez, imd

      2. Domain d3wfxb_: 3wfx B: [258873] automated match to d2gdma_ complexed with hem, hez, imd

10. Mycobacterium tuberculosis [TaxId:1773] [278787] (1 PDB entry)

    • Domain for 5ab8:

      • Domain d5ab8a_: 5ab8 A: [278800] automated match to d1dlwa_ complexed with act, fmt, gol, hem

11. Nematode (Caenorhabditis elegans) [TaxId:6239] [189323] (2 PDB entries)

    1. Domain for 2wtg:

       • Domain d2wtga_: 2wtg A: [169615] automated match to d1asha_ complexed with hem, oxy

    2. Domains for 2wth:

       1. Domain d2wtha_: 2wth A: [169616] automated match to d1asha_ complexed with gol, hem, oxy, so4

       2. Domain d2wthb_: 2wth B: [169617] automated match to d1asha_ complexed with gol, hem, oxy, so4

12. Nostoc sp. [TaxId:103690] [280510] (2 PDB entries)

    1. Domains for 4xxi:

       1. Domain d4xxia_: 4xxi A: [280513] automated match to d4po5a_ complexed with cyc

       2. Domain d4xxib_: 4xxi B: [280515] automated match to d4po5a_ complexed with cyc

    2. Domains for 4xxk:

       1. Domain d4xxka_: 4xxk A: [280511] automated match to d4po5a_ complexed with cyc

       2. Domain d4xxkb_: 4xxk B: [280514] automated match to d4po5a_ complexed with cyc

13. Oligobrachia mashikoi [TaxId:55676] [187601] (4 PDB entries)

    1. Domains for 2d2m:

       1. Domain d2d2ma_: 2d2m A: [163559] automated match to d1x9fb_ complexed with hem, oxy

       2. Domain d2d2mb_: 2d2m B: [163560] automated match to d1x9fb_ complexed with hem, oxy

       3. Domain d2d2mc_: 2d2m C: [163561] automated match to d1x9fa_ complexed with hem, oxy

       4. Domain d2d2md_: 2d2m D: [163562] automated match to d1x9fa_ complexed with hem, oxy

    2. Domains for 2zfo:

       1. Domain d2zfoa_: 2zfo A: [171194] automated match to d1x9fb_ complexed with gol, hem, oxy

       2. Domain d2zfob_: 2zfo B: [171195] automated match to d1x9fb_ complexed with gol, hem, oxy

       3. Domain d2zfoc_: 2zfo C: [171196] automated match to d1x9fa_ complexed with gol, hem, oxy

       4. Domain d2zfod_: 2zfo D: [171197] automated match to d1x9fa_ complexed with gol, hem, oxy

    3. Domains for 2zs0:

       1. Domain d2zs0a_: 2zs0 A: [171448] automated match to d1x9fb_ complexed with ca, cl, gol, hem, oxy

       2. Domain d2zs0b_: 2zs0 B: [171449] automated match to d1x9fb_ complexed with ca, cl, gol, hem, oxy

       3. Domain d2zs0c_: 2zs0 C: [171450] automated match to d1x9fa_ complexed with ca, cl, gol, hem, oxy

       4. Domain d2zs0d_: 2zs0 D: [171451] automated match to d1x9fa_ complexed with ca, cl, gol, hem, oxy

    4. Domains for 2zs1:

       1. Domain d2zs1a_: 2zs1 A: [171452] automated match to d1x9fb_ complexed with cl, gol, hem, mg, oxy

       2. Domain d2zs1b_: 2zs1 B: [171453] automated match to d1x9fb_ complexed with cl, gol, hem, mg, oxy

       3. Domain d2zs1c_: 2zs1 C: [171454] automated match to d1x9fa_ complexed with cl, gol, hem, mg, oxy

       4. Domain d2zs1d_: 2zs1 D: [171455] automated match to d1x9fa_ complexed with cl, gol, hem, mg, oxy

14. Ralstonia eutropha [TaxId:381666] [256009] (3 PDB entries)

    1. Domain for 3ozu:

       • Domain d3ozua1: 3ozu A:1-150 [248379] Other proteins in same PDB: d3ozua2, d3ozua3 automated match to d1cqxa1 complexed with fad, hem, po4, x89

    2. Domains for 3ozv:

       1. Domain d3ozva1: 3ozv A:1-150 [248382] Other proteins in same PDB: d3ozva2, d3ozva3, d3ozvb2, d3ozvb3 automated match to d1cqxa1 complexed with dgg, ecn, fad, hem, po4

       2. Domain d3ozvb1: 3ozv B:1-150 [248385] Other proteins in same PDB: d3ozva2, d3ozva3, d3ozvb2, d3ozvb3 automated match to d1cqxa1 complexed with dgg, ecn, fad, hem, po4

    3. Domains for 3ozw:

       1. Domain d3ozwa1: 3ozw A:1-150 [248388] Other proteins in same PDB: d3ozwa2, d3ozwa3, d3ozwb2, d3ozwb3 automated match to d1cqxa1 complexed with dgg, fad, hem, kkk, po4

       2. Domain d3ozwb1: 3ozw B:1-150 [248391] Other proteins in same PDB: d3ozwa2, d3ozwa3, d3ozwb2, d3ozwb3 automated match to d1cqxa1 complexed with dgg, fad, hem, kkk, po4

15. Riftia pachyptila [TaxId:6426] [254981] (1 PDB entry)

    • Domains for 1yhu:

      1. Domain d1yhua_: 1yhu A: [241013] automated match to d1x9fb_ complexed with hem, oxy, zn

      2. Domain d1yhub_: 1yhu B: [241014] automated match to d1x9fc_ complexed with hem, oxy, zn

      3. Domain d1yhud_: 1yhu D: [241015] automated match to d1x9fa_ complexed with hem, oxy, zn

      4. Domain d1yhue_: 1yhu E: [241016] automated match to d1x9fb_ complexed with hem, oxy, zn

      5. Domain d1yhuf_: 1yhu F: [241017] automated match to d1x9fc_ complexed with hem, oxy, zn

      6. Domain d1yhuh_: 1yhu H: [241018] automated match to d1x9fa_ complexed with hem, oxy, zn

      7. Domain d1yhui_: 1yhu I: [241019] automated match to d1x9fb_ complexed with hem, oxy, zn

      8. Domain d1yhuj_: 1yhu J: [241020] automated match to d1x9fc_ complexed with hem, oxy, zn

      9. Domain d1yhul_: 1yhu L: [241021] automated match to d1x9fa_ complexed with hem, oxy, zn

      10. Domain d1yhum_: 1yhu M: [241022] automated match to d1x9fb_ complexed with hem, oxy, zn

      11. Domain d1yhun_: 1yhu N: [241023] automated match to d1x9fc_ complexed with hem, oxy, zn

      12. Domain d1yhup_: 1yhu P: [241024] automated match to d1x9fa_ complexed with hem, oxy, zn

      13. Domain d1yhuq_: 1yhu Q: [241025] automated match to d1x9fb_ complexed with hem, oxy, zn

      14. Domain d1yhur_: 1yhu R: [241026] automated match to d1x9fc_ complexed with hem, oxy, zn

      15. Domain d1yhut_: 1yhu T: [241027] automated match to d1x9fa_ complexed with hem, oxy, zn

      16. Domain d1yhuu_: 1yhu U: [241028] automated match to d1x9fb_ complexed with hem, oxy, zn

      17. Domain d1yhuv_: 1yhu V: [241029] automated match to d1x9fc_ complexed with hem, oxy, zn

      18. Domain d1yhux_: 1yhu X: [241030] automated match to d1x9fa_ complexed with hem, oxy, zn

16. Synechocystis sp. [TaxId:1111708] [260740] (1 PDB entry)

    • Domains for 4po5:

      1. Domain d4po5a_: 4po5 A: [260741] Other proteins in same PDB: d4po5b_, d4po5d_, d4po5f_ automated match to d4f0ua_ complexed with cyc, so4

      2. Domain d4po5c_: 4po5 C: [263553] Other proteins in same PDB: d4po5b_, d4po5d_, d4po5f_ automated match to d4po5a_ complexed with cyc, so4

      3. Domain d4po5e_: 4po5 E: [263555] Other proteins in same PDB: d4po5b_, d4po5d_, d4po5f_ automated match to d4po5a_ complexed with cyc, so4

17. Tetrahymena pyriformis [TaxId:5908] [226112] (5 PDB entries)

    1. Domains for 3aq5:

       1. Domain d3aq5a_: 3aq5 A: [208302] automated match to d1s61b_ complexed with hem, oxy

       2. Domain d3aq5b_: 3aq5 B: [208303] automated match to d1s61b_ complexed with hem, oxy

    2. Domains for 3aq6:

       1. Domain d3aq6a_: 3aq6 A: [208304] automated match to d1s61b_ complexed with hem

       2. Domain d3aq6b_: 3aq6 B: [208305] automated match to d1s61b_ complexed with hem

    3. Domains for 3aq7:

       1. Domain d3aq7a_: 3aq7 A: [208306] automated match to d2gkmb_ complexed with hem; mutant

       2. Domain d3aq7b_: 3aq7 B: [208307] automated match to d2gkmb_ complexed with hem; mutant

    4. Domains for 3aq8:

       1. Domain d3aq8a_: 3aq8 A: [208308] automated match to d1idrb_ complexed with hem; mutant

       2. Domain d3aq8b_: 3aq8 B: [208309] automated match to d1idrb_ complexed with hem; mutant

    5. Domains for 3aq9:

       1. Domain d3aq9a_: 3aq9 A: [208310] automated match to d1idrb_ complexed with hem; mutant

       2. Domain d3aq9b_: 3aq9 B: [208311] automated match to d1idrb_ complexed with hem; mutant

18. Tokunagayusurika akamusi [TaxId:28383] [188112] (10 PDB entries)

    1. Domain for 1x3k:

       • Domain d1x3ka_: 1x3k A: [193197] automated match to d2g3ha_ complexed with hem

    2. Domain for 1x46:

       • Domain d1x46a_: 1x46 A: [162036] automated match to d1ecaa_ complexed with hem

    3. Domain for 2zwj:

       • Domain d2zwja_: 2zwj A: [207995] automated match to d1x3ka_ complexed with hem

    4. Domain for 3a5a:

       • Domain d3a5aa_: 3a5a A: [208108] automated match to d1x3ka_ complexed with hem

    5. Domain for 3a5b:

       • Domain d3a5ba_: 3a5b A: [208109] automated match to d1x3ka_ complexed with hem

    6. Domain for 3a5g:

       • Domain d3a5ga_: 3a5g A: [208110] automated match to d1x3ka_ complexed with cmo, hem

    7. Domain for 3a9m:

       • Domain d3a9ma_: 3a9m A: [208159] automated match to d1x3ka_ complexed with cmo, hem

    8. Domain for 3arj:

       • Domain d3arja_: 3arj A: [208348] automated match to d1x3ka_ complexed with cl, hem

    9. Domain for 3ark:

       • Domain d3arka_: 3ark A: [208349] automated match to d1x3ka_ complexed with cl, hem

    10. Domain for 3arl:

        • Domain d3arla_: 3arl A: [208350] automated match to d1x3ka_ complexed with cl, hem

More info for Protein automated matches from a.1.1.0: automated matches

Timeline for Protein automated matches from a.1.1.0: automated matches:

• Protein automated matches from a.1.1.0: automated matches first appeared in SCOPe 2.01
  
• Protein automated matches from a.1.1.0: automated matches appears in SCOPe 2.04
  
• Protein automated matches from a.1.1.0: automated matches appears in SCOPe 2.06
  
• Protein automated matches from a.1.1.0: automated matches appears in the current release, SCOPe 2.08