Lineage for Protein: automated matches

  1. Root: SCOPe 2.03
  2. 1253684Class a: All alpha proteins [46456] (284 folds)
  3. 1253685Fold a.1: Globin-like [46457] (2 superfamilies)
    core: 6 helices; folded leaf, partly opened
  4. 1253686Superfamily a.1.1: Globin-like [46458] (5 families) (S)
  5. 1256210Family a.1.1.0: automated matches [191420] (1 protein)
    not a true family
  6. 1256211Protein automated matches [190590] (11 species)
    not a true protein

Species:

  1. 1256212Agrobacterium tumefaciens [TaxId:358] [189552] (1 PDB entry)
  2. 1256215Campylobacter jejuni [TaxId:197] [187859] (2 PDB entries)
    1. Domains for 2ig3:
      1. 1256217Domain d2ig3a_: 2ig3 A: [165538]
        automated match to d1ux8a_
        complexed with act, cyn, hem, so4
      2. 1256218Domain d2ig3b_: 2ig3 B: [165539]
        automated match to d1ux8a_
        complexed with act, cyn, hem, so4
    2. Domain for 2wy4:
  3. 1256219Clam (Lucina pectinata) [TaxId:244486] [188300] (6 PDB entries)
    1. Domains for 2olp:
      1. 1256222Domain d2olpa_: 2olp A: [166763]
        automated match to d1b0ba_
        complexed with hem, oxy, so4
      2. 1256223Domain d2olpb_: 2olp B: [166764]
        automated match to d1b0ba_
        complexed with hem, oxy, so4
    2. Domains for 3pi1:
      1. 1256228Domain d3pi1a_: 3pi1 A: [183750]
        automated match to d1b0ba_
        complexed with hem, oxy
      2. 1256229Domain d3pi1b_: 3pi1 B: [183751]
        automated match to d1b0ba_
        complexed with hem, oxy
    3. Domains for 3pi2:
      1. 1256224Domain d3pi2a_: 3pi2 A: [183752]
        automated match to d1b0ba_
        complexed with ace, fmt, hem, oxy
      2. 1256225Domain d3pi2b_: 3pi2 B: [183753]
        automated match to d1b0ba_
        complexed with ace, fmt, hem, oxy
    4. Domains for 3pi3:
      1. 1256226Domain d3pi3a_: 3pi3 A: [183754]
        automated match to d1b0ba_
        complexed with hem, oxy
      2. 1256227Domain d3pi3b_: 3pi3 B: [183755]
        automated match to d1b0ba_
        complexed with hem, oxy
    5. Domains for 3pt7:
      1. 1256230Domain d3pt7a_: 3pt7 A: [183966]
        automated match to d1b0ba_
        complexed with gol, hem, oxy
      2. 1256231Domain d3pt7b_: 3pt7 B: [196096]
        automated match to d3pt8a_
        complexed with gol, hem, oxy
    6. Domains for 3pt8:
      1. 1256220Domain d3pt8a_: 3pt8 A: [183967]
        automated match to d1b0ba_
        complexed with cyn, fmt, gol, hem
      2. 1256221Domain d3pt8b_: 3pt8 B: [196095]
        automated match to d3pt8a_
        complexed with cyn, fmt, gol, hem
  4. 1256232Fasciola hepatica [TaxId:6192] [188561] (1 PDB entry)
  5. 1256234Fruit fly (Drosophila melanogaster) [TaxId:7227] [187733] (2 PDB entries)
    1. Domain for 2bk9:
    2. Domain for 2g3h:
  6. 1256237Gasterophilus intestinalis [TaxId:84525] [193835] (1 PDB entry)
  7. 1256240Methylacidiphilum infernorum [TaxId:481448] [195689] (3 PDB entries)
    1. Domains for 3s1i:
      1. 1256244Domain d3s1ia_: 3s1i A: [216165]
        automated match to d2zlua_
        complexed with hem, oxy, so4
      2. 1256245Domain d3s1ib_: 3s1i B: [216166]
        automated match to d2zlua_
        complexed with hem, oxy, so4
      3. 1256246Domain d3s1ic_: 3s1i C: [216167]
        automated match to d2zlua_
        complexed with hem, oxy, so4
    2. Domains for 3s1j:
      1. 1256247Domain d3s1ja_: 3s1j A: [216168]
        automated match to d2zlua_
        complexed with act, hem, so4
      2. 1256248Domain d3s1jb_: 3s1j B: [216169]
        automated match to d2zlua_
        complexed with act, hem, so4
      3. 1256249Domain d3s1jc_: 3s1j C: [216170]
        automated match to d2zlua_
        complexed with act, hem, so4
    3. Domains for 3ubc:
      1. 1256241Domain d3ubca_: 3ubc A: [195690]
        automated match to d1oj6b_
        complexed with hem, oxy
      2. 1256242Domain d3ubcd_: 3ubc D: [200966]
        automated match to d3ubca_
        complexed with hem, oxy
      3. 1256243Domain d3ubcg_: 3ubc G: [200967]
        automated match to d3ubca_
        complexed with hem, oxy
  8. 1256250Nematode (Caenorhabditis elegans) [TaxId:6239] [189323] (2 PDB entries)
    1. Domain for 2wtg:
    2. Domains for 2wth:
      1. 1256252Domain d2wtha_: 2wth A: [169616]
        automated match to d1asha_
        complexed with gol, hem, oxy, so4
      2. 1256253Domain d2wthb_: 2wth B: [169617]
        automated match to d1asha_
        complexed with gol, hem, oxy, so4
  9. 1256254Oligobrachia mashikoi [TaxId:55676] [187601] (4 PDB entries)
    1. Domains for 2d2m:
      1. 1256267Domain d2d2ma_: 2d2m A: [163559]
        automated match to d1x9fb_
        complexed with hem, oxy
      2. 1256268Domain d2d2mb_: 2d2m B: [163560]
        automated match to d1x9fb_
        complexed with hem, oxy
      3. 1256269Domain d2d2mc_: 2d2m C: [163561]
        automated match to d1x9fa_
        complexed with hem, oxy
      4. 1256270Domain d2d2md_: 2d2m D: [163562]
        automated match to d1x9fa_
        complexed with hem, oxy
    2. Domains for 2zfo:
      1. 1256263Domain d2zfoa_: 2zfo A: [171194]
        automated match to d1x9fb_
        complexed with gol, hem, oxy
      2. 1256264Domain d2zfob_: 2zfo B: [171195]
        automated match to d1x9fb_
        complexed with gol, hem, oxy
      3. 1256265Domain d2zfoc_: 2zfo C: [171196]
        automated match to d1x9fa_
        complexed with gol, hem, oxy
      4. 1256266Domain d2zfod_: 2zfo D: [171197]
        automated match to d1x9fa_
        complexed with gol, hem, oxy
    3. Domains for 2zs0:
      1. 1256255Domain d2zs0a_: 2zs0 A: [171448]
        automated match to d1x9fb_
        complexed with ca, cl, gol, hem, oxy
      2. 1256256Domain d2zs0b_: 2zs0 B: [171449]
        automated match to d1x9fb_
        complexed with ca, cl, gol, hem, oxy
      3. 1256257Domain d2zs0c_: 2zs0 C: [171450]
        automated match to d1x9fa_
        complexed with ca, cl, gol, hem, oxy
      4. 1256258Domain d2zs0d_: 2zs0 D: [171451]
        automated match to d1x9fa_
        complexed with ca, cl, gol, hem, oxy
    4. Domains for 2zs1:
      1. 1256259Domain d2zs1a_: 2zs1 A: [171452]
        automated match to d1x9fb_
        complexed with cl, gol, hem, mg, oxy
      2. 1256260Domain d2zs1b_: 2zs1 B: [171453]
        automated match to d1x9fb_
        complexed with cl, gol, hem, mg, oxy
      3. 1256261Domain d2zs1c_: 2zs1 C: [171454]
        automated match to d1x9fa_
        complexed with cl, gol, hem, mg, oxy
      4. 1256262Domain d2zs1d_: 2zs1 D: [171455]
        automated match to d1x9fa_
        complexed with cl, gol, hem, mg, oxy
  10. 1256271Tetrahymena pyriformis [TaxId:5908] [226112] (5 PDB entries)
    1. Domains for 3aq5:
      1. 1256274Domain d3aq5a_: 3aq5 A: [208302]
        automated match to d1s61b_
        complexed with hem, oxy
      2. 1256275Domain d3aq5b_: 3aq5 B: [208303]
        automated match to d1s61b_
        complexed with hem, oxy
    2. Domains for 3aq6:
      1. 1256280Domain d3aq6a_: 3aq6 A: [208304]
        automated match to d1s61b_
        complexed with hem
      2. 1256281Domain d3aq6b_: 3aq6 B: [208305]
        automated match to d1s61b_
        complexed with hem
    3. Domains for 3aq7:
      1. 1256276Domain d3aq7a_: 3aq7 A: [208306]
        automated match to d2gkmb_
        complexed with hem; mutant
      2. 1256277Domain d3aq7b_: 3aq7 B: [208307]
        automated match to d2gkmb_
        complexed with hem; mutant
    4. Domains for 3aq8:
      1. 1256278Domain d3aq8a_: 3aq8 A: [208308]
        automated match to d1idrb_
        complexed with hem; mutant
      2. 1256279Domain d3aq8b_: 3aq8 B: [208309]
        automated match to d1idrb_
        complexed with hem; mutant
    5. Domains for 3aq9:
      1. 1256272Domain d3aq9a_: 3aq9 A: [208310]
        automated match to d1idrb_
        complexed with hem; mutant
      2. 1256273Domain d3aq9b_: 3aq9 B: [208311]
        automated match to d1idrb_
        complexed with hem; mutant
  11. 1256282Tokunagayusurika akamusi [TaxId:28383] [188112] (10 PDB entries)
    1. Domain for 1x3k:
    2. Domain for 1x46:
    3. Domain for 2zwj:
    4. Domain for 3a5a:
    5. Domain for 3a5b:
    6. Domain for 3a5g:
    7. Domain for 3a9m:
    8. Domain for 3arj:
    9. Domain for 3ark:
    10. Domain for 3arl:

More info for Protein automated matches from a.1.1.0: automated matches

Timeline for Protein automated matches from a.1.1.0: automated matches: