Lineage for Protein: automated matches

  1. Root: SCOPe 2.02
  2. 1074916Class a: All alpha proteins [46456] (284 folds)
  3. 1074917Fold a.1: Globin-like [46457] (2 superfamilies)
    core: 6 helices; folded leaf, partly opened
  4. 1074918Superfamily a.1.1: Globin-like [46458] (5 families) (S)
  5. 1077287Family a.1.1.0: automated matches [191420] (1 protein)
    not a true family
  6. 1077288Protein automated matches [190590] (12 species)
    not a true protein

Species:

  1. 1077289Agrobacterium tumefaciens [TaxId:358] [189552] (1 PDB entry)
  2. 1077292Campylobacter jejuni [TaxId:197] [187859] (2 PDB entries)
    1. Domains for 2ig3:
      1. 1077294Domain d2ig3a_: 2ig3 A: [165538]
        automated match to d1ux8a_
        complexed with act, cyn, hem, so4
      2. 1077295Domain d2ig3b_: 2ig3 B: [165539]
        automated match to d1ux8a_
        complexed with act, cyn, hem, so4
    2. Domain for 2wy4:
  3. 1077296Clam (Lucina pectinata) [TaxId:244486] [188300] (3 PDB entries)
    1. Domains for 2olp:
      1. 1077299Domain d2olpa_: 2olp A: [166763]
        automated match to d1b0ba_
        complexed with hem, oxy, so4
      2. 1077300Domain d2olpb_: 2olp B: [166764]
        automated match to d1b0ba_
        complexed with hem, oxy, so4
    2. Domains for 3pt7:
      1. 1077301Domain d3pt7a_: 3pt7 A: [183966]
        automated match to d1b0ba_
        complexed with gol, hem, oxy
      2. 1077302Domain d3pt7b_: 3pt7 B: [196096]
        automated match to d3pt8a_
        complexed with gol, hem, oxy
    3. Domains for 3pt8:
      1. 1077297Domain d3pt8a_: 3pt8 A: [183967]
        automated match to d1b0ba_
        complexed with cyn, fmt, gol, hem
      2. 1077298Domain d3pt8b_: 3pt8 B: [196095]
        automated match to d3pt8a_
        complexed with cyn, fmt, gol, hem
  4. 1077303Fasciola hepatica [TaxId:6192] [188561] (1 PDB entry)
  5. 1077305Fruit fly (Drosophila melanogaster) [TaxId:7227] [187733] (2 PDB entries)
    1. Domain for 2bk9:
    2. Domain for 2g3h:
  6. 1077308Gasterophilus intestinalis [TaxId:84525] [193835] (1 PDB entry)
  7. 1077310Lucina pectinata [TaxId:244486] [189795] (1 PDB entry)
  8. 1077313Methylacidiphilum infernorum [TaxId:481448] [195689] (1 PDB entry)
  9. 1077315Nematode (Caenorhabditis elegans) [TaxId:6239] [189323] (2 PDB entries)
    1. Domain for 2wtg:
    2. Domains for 2wth:
      1. 1077317Domain d2wtha_: 2wth A: [169616]
        automated match to d1asha_
        complexed with gol, hem, oxy, so4
      2. 1077318Domain d2wthb_: 2wth B: [169617]
        automated match to d1asha_
        complexed with gol, hem, oxy, so4
  10. 1077319Oligobrachia mashikoi [TaxId:55676] [187601] (4 PDB entries)
    1. Domains for 2d2m:
      1. 1077332Domain d2d2ma_: 2d2m A: [163559]
        automated match to d1x9fb_
        complexed with hem, oxy
      2. 1077333Domain d2d2mb_: 2d2m B: [163560]
        automated match to d1x9fb_
        complexed with hem, oxy
      3. 1077334Domain d2d2mc_: 2d2m C: [163561]
        automated match to d1x9fa_
        complexed with hem, oxy
      4. 1077335Domain d2d2md_: 2d2m D: [163562]
        automated match to d1x9fa_
        complexed with hem, oxy
    2. Domains for 2zfo:
      1. 1077328Domain d2zfoa_: 2zfo A: [171194]
        automated match to d1x9fb_
        complexed with gol, hem, oxy
      2. 1077329Domain d2zfob_: 2zfo B: [171195]
        automated match to d1x9fb_
        complexed with gol, hem, oxy
      3. 1077330Domain d2zfoc_: 2zfo C: [171196]
        automated match to d1x9fa_
        complexed with gol, hem, oxy
      4. 1077331Domain d2zfod_: 2zfo D: [171197]
        automated match to d1x9fa_
        complexed with gol, hem, oxy
    3. Domains for 2zs0:
      1. 1077320Domain d2zs0a_: 2zs0 A: [171448]
        automated match to d1x9fb_
        complexed with ca, cl, gol, hem, oxy
      2. 1077321Domain d2zs0b_: 2zs0 B: [171449]
        automated match to d1x9fb_
        complexed with ca, cl, gol, hem, oxy
      3. 1077322Domain d2zs0c_: 2zs0 C: [171450]
        automated match to d1x9fa_
        complexed with ca, cl, gol, hem, oxy
      4. 1077323Domain d2zs0d_: 2zs0 D: [171451]
        automated match to d1x9fa_
        complexed with ca, cl, gol, hem, oxy
    4. Domains for 2zs1:
      1. 1077324Domain d2zs1a_: 2zs1 A: [171452]
        automated match to d1x9fb_
        complexed with cl, gol, hem, mg, oxy
      2. 1077325Domain d2zs1b_: 2zs1 B: [171453]
        automated match to d1x9fb_
        complexed with cl, gol, hem, mg, oxy
      3. 1077326Domain d2zs1c_: 2zs1 C: [171454]
        automated match to d1x9fa_
        complexed with cl, gol, hem, mg, oxy
      4. 1077327Domain d2zs1d_: 2zs1 D: [171455]
        automated match to d1x9fa_
        complexed with cl, gol, hem, mg, oxy
  11. 1077336Phacoides pectinatus [TaxId:244486] [189796] (2 PDB entries)
    1. Domains for 3pi2:
      1. 1077337Domain d3pi2a_: 3pi2 A: [183752]
        automated match to d1b0ba_
        complexed with ace, fmt, hem, oxy
      2. 1077338Domain d3pi2b_: 3pi2 B: [183753]
        automated match to d1b0ba_
        complexed with ace, fmt, hem, oxy
    2. Domains for 3pi3:
      1. 1077339Domain d3pi3a_: 3pi3 A: [183754]
        automated match to d1b0ba_
        complexed with hem, oxy
      2. 1077340Domain d3pi3b_: 3pi3 B: [183755]
        automated match to d1b0ba_
        complexed with hem, oxy
  12. 1077341Tokunagayusurika akamusi [TaxId:28383] [188112] (2 PDB entries)
    1. Domain for 1x3k:
    2. Domain for 1x46:

More info for Protein automated matches from a.1.1.0: automated matches

Timeline for Protein automated matches from a.1.1.0: automated matches: