Lineage for Protein: automated matches

  1. Root: SCOPe 2.05
  2. 1755445Class b: All beta proteins [48724] (176 folds)
  3. 1806095Fold b.78: beta-Prism II [51109] (1 superfamily)
    consists of 3 4-stranded sheets; strands are perpendicular to the 3-fold axis
    duplication: consists of two domains of this fold
  4. 1806096Superfamily b.78.1: alpha-D-mannose-specific plant lectins [51110] (2 families) (S)
  5. 1806148Family b.78.1.0: automated matches [191418] (1 protein)
    not a true family
  6. 1806149Protein automated matches [190587] (7 species)
    not a true protein

Species:

  1. 1806150Colocasia esculenta [TaxId:4460] [276542] (1 PDB entry)
  2. 1806155Crocus vernus [TaxId:87752] [189995] (1 PDB entry)
  3. 1806160Curculigo latifolia [TaxId:4676] [187595] (2 PDB entries)
    1. Domains for 2d04:
      1. 1806165Domain d2d04a_: 2d04 A: [163518]
        automated match to d1npla_
        complexed with nag
      2. 1806166Domain d2d04b_: 2d04 B: [163519]
        automated match to d1npla_
        complexed with nag
      3. 1806167Domain d2d04c_: 2d04 C: [163520]
        automated match to d1npla_
        complexed with nag
      4. 1806168Domain d2d04d_: 2d04 D: [163521]
        automated match to d1npla_
        complexed with nag
      5. 1806169Domain d2d04e_: 2d04 E: [163522]
        automated match to d1npla_
        complexed with nag
      6. 1806170Domain d2d04f_: 2d04 F: [163523]
        automated match to d1npla_
        complexed with nag
      7. 1806171Domain d2d04g_: 2d04 G: [163524]
        automated match to d1npla_
        complexed with nag
      8. 1806172Domain d2d04h_: 2d04 H: [163525]
        automated match to d1npla_
        complexed with nag
    2. Domains for 2dpf:
      1. 1806161Domain d2dpfa_: 2dpf A: [163649]
        automated match to d1npla_
        complexed with so4
      2. 1806162Domain d2dpfb_: 2dpf B: [163650]
        automated match to d1npla_
        complexed with so4
      3. 1806163Domain d2dpfc_: 2dpf C: [163651]
        automated match to d1npla_
        complexed with so4
      4. 1806164Domain d2dpfd_: 2dpf D: [163652]
        automated match to d1npla_
        complexed with so4
  4. 1806173Marasmius oreades [TaxId:181124] [271894] (2 PDB entries)
    1. Domain for 4pdt:
    2. Domain for 4tkc:
  5. 1806176Mycobacterium smegmatis [TaxId:246196] [258042] (2 PDB entries)
    1. Domains for 4oit:
      1. 1806177Domain d4oita_: 4oit A: [263291]
        automated match to d4oitb_
        complexed with bma, man
      2. 1806178Domain d4oitb_: 4oit B: [258043]
        automated match to d2d04f_
        complexed with bma, man
      3. 1806179Domain d4oitc_: 4oit C: [263292]
        automated match to d4oitb_
        complexed with bma, man
      4. 1806180Domain d4oitd_: 4oit D: [263293]
        automated match to d4oitb_
        complexed with bma, man
    2. Domains for 4okc:
      1. 1806181Domain d4okca_: 4okc A: [267070]
        automated match to d4oitb_
      2. 1806182Domain d4okcb_: 4okc B: [267071]
        automated match to d4oitb_
  6. 1806183Polygonatum cyrtonema [TaxId:195526] [189271] (3 PDB entries)
    1. Domains for 3a0c:
      1. 1806186Domain d3a0ca_: 3a0c A: [171624]
        automated match to d1jpca_
      2. 1806187Domain d3a0cb_: 3a0c B: [171625]
        automated match to d1jpca_
      3. 1806188Domain d3a0cc_: 3a0c C: [171626]
        automated match to d1jpca_
      4. 1806189Domain d3a0cd_: 3a0c D: [171627]
        automated match to d1jpca_
    2. Domain for 3a0d:
    3. Domain for 3a0e:
  7. 1806190Remusatia vivipara [TaxId:189456] [193663] (1 PDB entry)

More info for Protein automated matches from b.78.1.0: automated matches

Timeline for Protein automated matches from b.78.1.0: automated matches: