Lineage for Protein: automated matches

  1. Root: SCOPe 2.03
  2. 1396887Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1397247Fold d.2: Lysozyme-like [53954] (1 superfamily)
    common alpha+beta motif for the active site region
  4. 1397248Superfamily d.2.1: Lysozyme-like [53955] (12 families) (S)
  5. 1398928Family d.2.1.0: automated matches [191411] (1 protein)
    not a true family
  6. 1398929Protein automated matches [190563] (9 species)
    not a true protein

Species:

  1. 1398930Bryum coronatum [TaxId:216087] [237943] (1 PDB entry)
  2. 1398932Homo sapiens [TaxId:9606] [228081] (1 PDB entry)
  3. 1398935House fly (Musca domestica) [TaxId:7370] [187696] (3 PDB entries)
    1. Domains for 2fbd:
      1. 1398936Domain d2fbda_: 2fbd A: [164320]
        automated match to d1gd6a_
        complexed with peg, so4
      2. 1398937Domain d2fbdb_: 2fbd B: [164321]
        automated match to d1gd6a_
        complexed with peg, so4
    2. Domains for 2h5z:
      1. 1398938Domain d2h5za_: 2h5z A: [164956]
        automated match to d1gd6a_
        complexed with cto
      2. 1398939Domain d2h5zb_: 2h5z B: [164957]
        automated match to d1gd6a_
        complexed with cto
    3. Domains for 3cb7:
      1. 1398940Domain d3cb7a_: 3cb7 A: [173114]
        automated match to d1gd6a_
        complexed with acy, gol, ipa
      2. 1398941Domain d3cb7b_: 3cb7 B: [173115]
        automated match to d1gd6a_
        complexed with acy, gol, ipa
  4. 1398942Mouse (Mus musculus) [TaxId:10090] [187760] (1 PDB entry)
  5. 1398946Mycobacterium tuberculosis [TaxId:1773] [236519] (1 PDB entry)
  6. 1398953Picea abies [TaxId:3329] [188984] (3 PDB entries)
    1. Domain for 3hbd:
    2. Domain for 3hbe:
    3. Domain for 3hbh:
  7. 1398957Staphylococcus aureus [TaxId:196620] [188997] (1 PDB entry)
  8. 1398959Streptomyces coelicolor [TaxId:1902] [187551] (1 PDB entry)
  9. 1398962Zea mays [TaxId:4577] [237294] (1 PDB entry)

More info for Protein automated matches from d.2.1.0: automated matches

Timeline for Protein automated matches from d.2.1.0: automated matches: