Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2530460Fold d.93: SH2-like [55549] (1 superfamily)
    3 layers: a/b/a; antiparallel beta-sheet of 5 strands is flanked by two helices
  4. 2530461Superfamily d.93.1: SH2 domain [55550] (2 families) (S)
  5. 2530930Family d.93.1.0: automated matches [191409] (1 protein)
    not a true family
  6. 2530931Protein automated matches [190561] (4 species)
    not a true protein

Species:

  1. 2530932Human (Homo sapiens) [TaxId:9606] [187549] (56 PDB entries)
    1. Domain for 1wqu:
    2. Domain for 1z3k:
    3. Domains for 2b3o:
      1. 2530993Domain d2b3oa1: 2b3o A:2-108 [241256]
        Other proteins in same PDB: d2b3oa3
        automated match to d2shpa2
      2. 2530994Domain d2b3oa2: 2b3o A:109-215 [241257]
        Other proteins in same PDB: d2b3oa3
        automated match to d2shpa3
    4. Domain for 2ci8:
    5. Domain for 2cia:
    6. Domain for 2crh:
    7. Domain for 2dcr:
    8. Domain for 2dlz:
    9. Domain for 2dm0:
    10. Domain for 2ecd:
    11. Domain for 2ekx:
    12. Domain for 2ge9:
    13. Domain for 2gsb:
    14. Domain for 2kk6:
    15. Domain for 2lnx:
    16. Domain for 2mk2:
    17. Domain for 2ysx:
    18. Domain for 3eac:
    19. Domain for 3eaz:
    20. Domain for 3nhn:
    21. Domains for 3ps5:
      1. 2530991Domain d3ps5a1: 3ps5 A:1-108 [248637]
        Other proteins in same PDB: d3ps5a3
        automated match to d2shpa2
        complexed with so4
      2. 2530992Domain d3ps5a2: 3ps5 A:109-215 [248638]
        Other proteins in same PDB: d3ps5a3
        automated match to d2shpa3
        complexed with so4
    22. Domain for 3vgo:
    23. Domain for 3vrn:
    24. Domains for 3vrq:
      1. 2530952Domain d3vrqa2: 3vrq A:234-320 [250667]
        Other proteins in same PDB: d3vrqa1, d3vrqa3, d3vrqb1, d3vrqb3
        automated match to d1b47a3
        complexed with ca; mutant
      2. 2530953Domain d3vrqb2: 3vrq B:234-320 [250669]
        Other proteins in same PDB: d3vrqa1, d3vrqa3, d3vrqb1, d3vrqb3
        automated match to d1b47a3
        complexed with ca; mutant
    25. Domains for 3vs7:
      1. 2530989Domain d3vs7a2: 3vs7 A:147-249 [250671]
        Other proteins in same PDB: d3vs7a1, d3vs7a3, d3vs7a4, d3vs7b1, d3vs7b3, d3vs7b4
        automated match to d1fmka2
        complexed with ca, cl, ks1
      2. 2530990Domain d3vs7b2: 3vs7 B:147-249 [250674]
        Other proteins in same PDB: d3vs7a1, d3vs7a3, d3vs7a4, d3vs7b1, d3vs7b3, d3vs7b4
        automated match to d1fmka2
        complexed with ca, cl, ks1
    26. Domain for 4d8k:
    27. Domains for 4dgp:
      1. 2530942Domain d4dgpa1: 4dgp A:3-110 [251443]
        Other proteins in same PDB: d4dgpa3
        automated match to d2shpa2
      2. 2530943Domain d4dgpa2: 4dgp A:111-218 [251444]
        Other proteins in same PDB: d4dgpa3
        automated match to d2shpa3
    28. Domains for 4dgx:
      1. 2530954Domain d4dgxa1: 4dgx A:3-110 [251446]
        Other proteins in same PDB: d4dgxa3
        automated match to d2shpa2
        mutant
      2. 2530955Domain d4dgxa2: 4dgx A:111-218 [251447]
        Other proteins in same PDB: d4dgxa3
        automated match to d2shpa3
        mutant
    29. Domains for 4gwf:
      1. 2530960Domain d4gwfa1: 4gwf A:2-110 [252337]
        Other proteins in same PDB: d4gwfa3, d4gwfb3
        automated match to d2shpa2
        complexed with edo, gol, peg, pge; mutant
      2. 2530961Domain d4gwfa2: 4gwf A:111-218 [252338]
        Other proteins in same PDB: d4gwfa3, d4gwfb3
        automated match to d2shpa3
        complexed with edo, gol, peg, pge; mutant
      3. 2530962Domain d4gwfb1: 4gwf B:3-110 [252340]
        Other proteins in same PDB: d4gwfa3, d4gwfb3
        automated match to d2shpa2
        complexed with edo, gol, peg, pge; mutant
      4. 2530963Domain d4gwfb2: 4gwf B:111-218 [252341]
        Other proteins in same PDB: d4gwfa3, d4gwfb3
        automated match to d2shpa3
        complexed with edo, gol, peg, pge; mutant
    30. Domains for 4h1o:
      1. 2530979Domain d4h1oa1: 4h1o A:2-110 [252366]
        Other proteins in same PDB: d4h1oa3
        automated match to d2shpa2
        complexed with edo; mutant
      2. 2530980Domain d4h1oa2: 4h1o A:111-218 [252367]
        Other proteins in same PDB: d4h1oa3
        automated match to d2shpa3
        complexed with edo; mutant
    31. Domains for 4h34:
      1. 2531006Domain d4h34a1: 4h34 A:4-110 [252370]
        Other proteins in same PDB: d4h34a3
        automated match to d2shpa2
        complexed with edo, gol; mutant
      2. 2531007Domain d4h34a2: 4h34 A:111-218 [252371]
        Other proteins in same PDB: d4h34a3
        automated match to d2shpa3
        complexed with edo, gol; mutant
    32. Domain for 4je4:
    33. Domain for 4jeg:
    34. Domains for 4lue:
      1. 2530999Domain d4luea2: 4lue A:147-249 [253695]
        Other proteins in same PDB: d4luea1, d4luea3, d4luea4, d4lueb1, d4lueb3, d4lueb4
        automated match to d1fmka2
        complexed with ca, cl, gol, imd, vse
      2. 2531000Domain d4lueb2: 4lue B:147-249 [253698]
        Other proteins in same PDB: d4luea1, d4luea3, d4luea4, d4lueb1, d4lueb3, d4lueb4
        automated match to d1fmka2
        complexed with ca, cl, gol, imd, vse
    35. Domains for 4nwf:
      1. 2530969Domain d4nwfa1: 4nwf A:3-110 [261530]
        Other proteins in same PDB: d4nwfa3, d4nwfb3
        automated match to d2b3oa1
        complexed with edo, gol; mutant
      2. 2530970Domain d4nwfa2: 4nwf A:111-218 [261534]
        Other proteins in same PDB: d4nwfa3, d4nwfb3
        automated match to d2b3oa2
        complexed with edo, gol; mutant
      3. 2530971Domain d4nwfb1: 4nwf B:3-110 [261525]
        Other proteins in same PDB: d4nwfa3, d4nwfb3
        automated match to d2b3oa1
        complexed with edo, gol; mutant
      4. 2530972Domain d4nwfb2: 4nwf B:111-218 [261526]
        Other proteins in same PDB: d4nwfa3, d4nwfb3
        automated match to d2b3oa2
        complexed with edo, gol; mutant
    36. Domains for 4nwg:
      1. 2531001Domain d4nwga1: 4nwg A:2-110 [261527]
        Other proteins in same PDB: d4nwga3, d4nwgb3
        automated match to d2b3oa1
        complexed with edo, peg, so4; mutant
      2. 2531002Domain d4nwga2: 4nwg A:111-218 [261531]
        Other proteins in same PDB: d4nwga3, d4nwgb3
        automated match to d2b3oa2
        complexed with edo, peg, so4; mutant
      3. 2531003Domain d4nwgb1: 4nwg B:2-110 [263231]
        Other proteins in same PDB: d4nwga3, d4nwgb3
        automated match to d2b3oa1
        complexed with edo, peg, so4; mutant
      4. 2531004Domain d4nwgb2: 4nwg B:111-218 [263232]
        Other proteins in same PDB: d4nwga3, d4nwgb3
        automated match to d3ps5a2
        complexed with edo, peg, so4; mutant
    37. Domains for 4ohd:
      1. 2530997Domain d4ohda1: 4ohd A:2-110 [259874]
        Other proteins in same PDB: d4ohda3
        automated match to d2b3oa1
        mutant
      2. 2530998Domain d4ohda2: 4ohd A:111-218 [259875]
        Other proteins in same PDB: d4ohda3
        automated match to d2b3oa2
        mutant
    38. Domains for 4ohe:
      1. 2530977Domain d4ohea1: 4ohe A:3-110 [259871]
        Other proteins in same PDB: d4ohea3
        automated match to d2b3oa1
        mutant
      2. 2530978Domain d4ohea2: 4ohe A:111-218 [259872]
        Other proteins in same PDB: d4ohea3
        automated match to d2b3oa2
        mutant
    39. Domains for 4ohh:
      1. 2530995Domain d4ohha1: 4ohh A:3-110 [259865]
        Other proteins in same PDB: d4ohha3
        automated match to d2b3oa1
        mutant
      2. 2530996Domain d4ohha2: 4ohh A:111-218 [259866]
        Other proteins in same PDB: d4ohha3
        automated match to d2b3oa2
        mutant
    40. Domains for 4ohi:
      1. 2530957Domain d4ohia1: 4ohi A:3-110 [259867]
        Other proteins in same PDB: d4ohia3
        automated match to d2b3oa1
        mutant
      2. 2530958Domain d4ohia2: 4ohi A:111-218 [259869]
        Other proteins in same PDB: d4ohia3
        automated match to d2b3oa2
        mutant
    41. Domains for 4ohl:
      1. 2530964Domain d4ohla1: 4ohl A:3-110 [259862]
        Other proteins in same PDB: d4ohla3, d4ohlb3
        automated match to d2b3oa1
        mutant
      2. 2530965Domain d4ohla2: 4ohl A:111-218 [259863]
        Other proteins in same PDB: d4ohla3, d4ohlb3
        automated match to d2b3oa2
        mutant
      3. 2530966Domain d4ohlb1: 4ohl B:3-110 [263288]
        Other proteins in same PDB: d4ohla3, d4ohlb3
        automated match to d2b3oa1
        mutant
      4. 2530967Domain d4ohlb2: 4ohl B:111-218 [263289]
        Other proteins in same PDB: d4ohla3, d4ohlb3
        automated match to d3ps5a2
        mutant
    42. Domain for 4xey:
    43. Domains for 5ehp:
      1. 2530944Domain d5ehpa1: 5ehp A:3-110 [319354]
        Other proteins in same PDB: d5ehpa3, d5ehpb3
        automated match to d2shpa2
        complexed with 5oa, po4
      2. 2530945Domain d5ehpa2: 5ehp A:111-218 [319355]
        Other proteins in same PDB: d5ehpa3, d5ehpb3
        automated match to d2shpa3
        complexed with 5oa, po4
      3. 2530946Domain d5ehpb1: 5ehp B:4-110 [319265]
        Other proteins in same PDB: d5ehpa3, d5ehpb3
        automated match to d2shpa2
        complexed with 5oa, po4
      4. 2530947Domain d5ehpb2: 5ehp B:111-218 [319266]
        Other proteins in same PDB: d5ehpa3, d5ehpb3
        automated match to d2shpa3
        complexed with 5oa, po4
    44. Domains for 5ehr:
      1. 2530938Domain d5ehra1: 5ehr A:4-110 [318972]
        Other proteins in same PDB: d5ehra3, d5ehrb3
        automated match to d2shpa2
        complexed with 5od, po4
      2. 2530939Domain d5ehra2: 5ehr A:111-218 [318973]
        Other proteins in same PDB: d5ehra3, d5ehrb3
        automated match to d2shpa3
        complexed with 5od, po4
      3. 2530940Domain d5ehrb1: 5ehr B:4-110 [318935]
        Other proteins in same PDB: d5ehra3, d5ehrb3
        automated match to d2shpa2
        complexed with 5od, po4
      4. 2530941Domain d5ehrb2: 5ehr B:111-218 [318936]
        Other proteins in same PDB: d5ehra3, d5ehrb3
        automated match to d2shpa3
        complexed with 5od, po4
    45. Domains for 5i6v:
      1. 2530948Domain d5i6va1: 5i6v A:3-110 [315460]
        Other proteins in same PDB: d5i6va3, d5i6vb3
        automated match to d2shpa2
        complexed with gol; mutant
      2. 2530949Domain d5i6va2: 5i6v A:111-218 [315461]
        Other proteins in same PDB: d5i6va3, d5i6vb3
        automated match to d2shpa3
        complexed with gol; mutant
      3. 2530950Domain d5i6vb1: 5i6v B:2-110 [315540]
        Other proteins in same PDB: d5i6va3, d5i6vb3
        automated match to d2shpa2
        complexed with gol; mutant
      4. 2530951Domain d5i6vb2: 5i6v B:111-218 [315541]
        Other proteins in same PDB: d5i6va3, d5i6vb3
        automated match to d2shpa3
        complexed with gol; mutant
    46. Domains for 5ibm:
      1. 2530973Domain d5ibma1: 5ibm A:4-110 [315486]
        Other proteins in same PDB: d5ibma3, d5ibmb3
        automated match to d2shpa2
        mutant
      2. 2530974Domain d5ibma2: 5ibm A:111-218 [315487]
        Other proteins in same PDB: d5ibma3, d5ibmb3
        automated match to d2shpa3
        mutant
      3. 2530975Domain d5ibmb1: 5ibm B:3-110 [315468]
        Other proteins in same PDB: d5ibma3, d5ibmb3
        automated match to d2shpa2
        mutant
      4. 2530976Domain d5ibmb2: 5ibm B:111-218 [315469]
        Other proteins in same PDB: d5ibma3, d5ibmb3
        automated match to d2shpa3
        mutant
    47. Domains for 5ibs:
      1. 2530984Domain d5ibsa1: 5ibs A:4-110 [315572]
        Other proteins in same PDB: d5ibsa3, d5ibsb3
        automated match to d2shpa2
        mutant
      2. 2530985Domain d5ibsa2: 5ibs A:111-218 [315573]
        Other proteins in same PDB: d5ibsa3, d5ibsb3
        automated match to d2shpa3
        mutant
      3. 2530986Domain d5ibsb1: 5ibs B:4-110 [315503]
        Other proteins in same PDB: d5ibsa3, d5ibsb3
        automated match to d2shpa2
        mutant
      4. 2530987Domain d5ibsb2: 5ibs B:111-218 [315504]
        Other proteins in same PDB: d5ibsa3, d5ibsb3
        automated match to d2shpa3
        mutant
    48. Domain for 5mo4:
    49. Domains for 5xzr:
      1. 2531009Domain d5xzra1: 5xzr A:1-110 [342909]
        Other proteins in same PDB: d5xzra3
        automated match to d2b3oa1
        complexed with 8j6; mutant
      2. 2531010Domain d5xzra2: 5xzr A:111-218 [342910]
        Other proteins in same PDB: d5xzra3
        automated match to d3ps5a2
        complexed with 8j6; mutant
    50. Domains for 6bmr:
      1. 3049681Domain d6bmrb1: 6bmr B:4-110 [349743]
        Other proteins in same PDB: d6bmra3, d6bmrb3
        automated match to d2shpa2
        complexed with dzv, gol, po4
      2. 3049682Domain d6bmrb2: 6bmr B:111-218 [349744]
        Other proteins in same PDB: d6bmra3, d6bmrb3
        automated match to d2shpa3
        complexed with dzv, gol, po4
      3. 3049890Domain d6bmra1: 6bmr A:3-110 [349952]
        Other proteins in same PDB: d6bmra3, d6bmrb3
        automated match to d2shpa2
        complexed with dzv, gol, po4
      4. 3049891Domain d6bmra2: 6bmr A:111-218 [349953]
        Other proteins in same PDB: d6bmra3, d6bmrb3
        automated match to d2shpa3
        complexed with dzv, gol, po4
    51. Domains for 6bmu:
      1. 3049701Domain d6bmua1: 6bmu A:3-110 [349763]
        Other proteins in same PDB: d6bmua3, d6bmub3
        automated match to d2shpa2
        complexed with 5od, dzv, gol, po4
      2. 3049702Domain d6bmua2: 6bmu A:111-218 [349764]
        Other proteins in same PDB: d6bmua3, d6bmub3
        automated match to d2shpa3
        complexed with 5od, dzv, gol, po4
      3. 3050007Domain d6bmub1: 6bmu B:4-110 [350069]
        Other proteins in same PDB: d6bmua3, d6bmub3
        automated match to d2shpa2
        complexed with 5od, dzv, gol, po4
      4. 3050008Domain d6bmub2: 6bmu B:111-218 [350070]
        Other proteins in same PDB: d6bmua3, d6bmub3
        automated match to d2shpa3
        complexed with 5od, dzv, gol, po4
    52. Domains for 6bmv:
      1. 3049678Domain d6bmvb1: 6bmv B:4-110 [349740]
        Other proteins in same PDB: d6bmva3, d6bmvb3
        automated match to d2shpa2
        complexed with dzs, po4
      2. 3049679Domain d6bmvb2: 6bmv B:111-218 [349741]
        Other proteins in same PDB: d6bmva3, d6bmvb3
        automated match to d2shpa3
        complexed with dzs, po4
      3. 3049769Domain d6bmva1: 6bmv A:3-110 [349831]
        Other proteins in same PDB: d6bmva3, d6bmvb3
        automated match to d2shpa2
        complexed with dzs, po4
      4. 3049770Domain d6bmva2: 6bmv A:111-218 [349832]
        Other proteins in same PDB: d6bmva3, d6bmvb3
        automated match to d2shpa3
        complexed with dzs, po4
    53. Domains for 6bmw:
      1. 3049692Domain d6bmwa1: 6bmw A:3-110 [349754]
        Other proteins in same PDB: d6bmwa3, d6bmwb3
        automated match to d2shpa2
        complexed with 5od, dzs, gol, po4
      2. 3049693Domain d6bmwa2: 6bmw A:111-218 [349755]
        Other proteins in same PDB: d6bmwa3, d6bmwb3
        automated match to d2shpa3
        complexed with 5od, dzs, gol, po4
      3. 3049806Domain d6bmwb1: 6bmw B:4-110 [349868]
        Other proteins in same PDB: d6bmwa3, d6bmwb3
        automated match to d2shpa2
        complexed with 5od, dzs, gol, po4
      4. 3049807Domain d6bmwb2: 6bmw B:111-218 [349869]
        Other proteins in same PDB: d6bmwa3, d6bmwb3
        automated match to d2shpa3
        complexed with 5od, dzs, gol, po4
    54. Domains for 6bmx:
      1. 3049823Domain d6bmxa1: 6bmx A:3-110 [349885]
        Other proteins in same PDB: d6bmxa3, d6bmxb3
        automated match to d2shpa2
        complexed with dyv, gol, po4
      2. 3049824Domain d6bmxa2: 6bmx A:111-218 [349886]
        Other proteins in same PDB: d6bmxa3, d6bmxb3
        automated match to d2shpa3
        complexed with dyv, gol, po4
      3. 3049828Domain d6bmxb1: 6bmx B:4-110 [349890]
        Other proteins in same PDB: d6bmxa3, d6bmxb3
        automated match to d2shpa2
        complexed with dyv, gol, po4
      4. 3049829Domain d6bmxb2: 6bmx B:111-218 [349891]
        Other proteins in same PDB: d6bmxa3, d6bmxb3
        automated match to d2shpa3
        complexed with dyv, gol, po4
    55. Domains for 6bmy:
      1. 3049852Domain d6bmyb1: 6bmy B:4-110 [349914]
        Other proteins in same PDB: d6bmya3, d6bmyb3
        automated match to d2shpa2
        complexed with 5od, dyv, gol, po4
      2. 3049853Domain d6bmyb2: 6bmy B:111-218 [349915]
        Other proteins in same PDB: d6bmya3, d6bmyb3
        automated match to d2shpa3
        complexed with 5od, dyv, gol, po4
      3. 3049860Domain d6bmya1: 6bmy A:3-110 [349922]
        Other proteins in same PDB: d6bmya3, d6bmyb3
        automated match to d2shpa2
        complexed with 5od, dyv, gol, po4
      4. 3049861Domain d6bmya2: 6bmy A:111-218 [349923]
        Other proteins in same PDB: d6bmya3, d6bmyb3
        automated match to d2shpa3
        complexed with 5od, dyv, gol, po4
    56. Domains for 6bn5:
      1. 2530981Domain d6bn5a1: 6bn5 A:6-110 [342924]
        Other proteins in same PDB: d6bn5a3, d6bn5b2
        automated match to d2shpa2
        complexed with dzj
      2. 2530982Domain d6bn5a2: 6bn5 A:111-218 [342925]
        Other proteins in same PDB: d6bn5a3, d6bn5b2
        automated match to d2shpa3
        complexed with dzj
      3. 2530983Domain d6bn5b1: 6bn5 B:4-110 [342934]
        Other proteins in same PDB: d6bn5a3, d6bn5b2
        automated match to d2shpa2
        complexed with dzj
  2. 2531026Monosiga brevicollis [TaxId:81824] [323144] (1 PDB entry)
  3. 2531028Mouse (Mus musculus) [TaxId:10090] [226265] (5 PDB entries)
    1. Domain for 2dly:
    2. Domains for 2dx0:
      1. 2531031Domain d2dx0a_: 2dx0 A: [241653]
        automated match to d1mila_
        complexed with so4
      2. 2531032Domain d2dx0b_: 2dx0 B: [241654]
        automated match to d1mila_
        complexed with so4
    3. Domain for 2eo6:
    4. Domain for 3uf4:
    5. Domain for 5mtj:
  4. 2531035Norway rat (Rattus norvegicus) [TaxId:10116] [255150] (2 PDB entries)
    1. Domain for 2eob:
    2. Domain for 2rsy:

More info for Protein automated matches from d.93.1.0: automated matches

Timeline for Protein automated matches from d.93.1.0: automated matches: