Lineage for Protein: automated matches

  1. Root: SCOPe 2.01
  2. 968085Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
  3. 1002544Fold c.69: alpha/beta-Hydrolases [53473] (1 superfamily)
    core: 3 layers, a/b/a; mixed beta-sheet of 8 strands, order 12435678, strand 2 is antiparallel to the rest
  4. 1002545Superfamily c.69.1: alpha/beta-Hydrolases [53474] (42 families) (S)
    many members have left-handed crossover connection between strand 8 and additional strand 9
  5. 1004084Family c.69.1.0: automated matches [191404] (1 protein)
    not a true family
  6. 1004085Protein automated matches [190543] (18 species)
    not a true protein

Species:

  1. 1004086Agrobacterium tumefaciens [TaxId:176299] [188961] (1 PDB entry)
  2. 1004093Bacillus anthracis [TaxId:198094] [188737] (1 PDB entry)
  3. 1004097Escherichia coli [TaxId:562] [188027] (1 PDB entry)
  4. 1004102Fungus (Aspergillus oryzae) [TaxId:5062] [189066] (1 PDB entry)
  5. 1004104Geobacillus stearothermophilus [TaxId:1422] [187958] (2 PDB entries)
    1. Domain for 2ogs:
    2. Domain for 2ogt:
  6. 1004107Glomerella cingulata [TaxId:5457] [188664] (3 PDB entries)
    1. Domain for 3dcn:
    2. Domains for 3dd5:
      1. 1004111Domain d3dd5a_: 3dd5 A: [173825]
        automated match to d1cuwa_
        complexed with dep
      2. 1004112Domain d3dd5b_: 3dd5 B: [173826]
        automated match to d1cuwa_
        complexed with dep
      3. 1004113Domain d3dd5c_: 3dd5 C: [173827]
        automated match to d1cuwa_
        complexed with dep
      4. 1004114Domain d3dd5d_: 3dd5 D: [173828]
        automated match to d1cuwa_
        complexed with dep
      5. 1004115Domain d3dd5e_: 3dd5 E: [173829]
        automated match to d1cuwa_
        complexed with dep
      6. 1004116Domain d3dd5f_: 3dd5 F: [173830]
        automated match to d1cuwa_
        complexed with dep
      7. 1004117Domain d3dd5g_: 3dd5 G: [173831]
        automated match to d1cuwa_
        complexed with dep
      8. 1004118Domain d3dd5h_: 3dd5 H: [173832]
        automated match to d1cuwa_
        complexed with dep
    3. Domains for 3dea:
      1. 1004109Domain d3deaa_: 3dea A: [173866]
        automated match to d1cuwa_
        complexed with hzh
      2. 1004110Domain d3deab_: 3dea B: [173867]
        automated match to d1cuwa_
        complexed with hzh
  7. 1004119Human (Homo sapiens) [TaxId:9606] [188340] (2 PDB entries)
    1. Domain for 2ocl:
    2. Domains for 3fcx:
      1. 1004120Domain d3fcxa_: 3fcx A: [175701]
        automated match to d1pv1a_
        complexed with ca, mg
      2. 1004121Domain d3fcxb_: 3fcx B: [175702]
        automated match to d1pv1a_
        complexed with ca, mg
  8. 1004123Lactobacillus rhamnosus [TaxId:486408] [188926] (5 PDB entries)
    1. Domain for 3dkr:
    2. Domain for 3dlt:
    3. Domain for 3dyi:
    4. Domain for 3dyv:
    5. Domain for 3e1g:
  9. 1004129Lactococcus lactis [TaxId:272623] [189573] (1 PDB entry)
  10. 1004132Mouse (Mus musculus) [TaxId:10090] [188313] (1 PDB entry)
  11. 1004135Mycobacterium tuberculosis [TaxId:83332] [189096] (4 PDB entries)
    1. Domains for 2wud:
      1. 1004142Domain d2wuda_: 2wud A: [169638]
        automated match to d2puha1
        complexed with scn; mutant
      2. 1004143Domain d2wudb_: 2wud B: [169639]
        automated match to d2puha1
        complexed with scn; mutant
    2. Domains for 2wue:
      1. 1004138Domain d2wuea_: 2wue A: [169640]
        automated match to d2puha1
        complexed with kek, scn; mutant
      2. 1004139Domain d2wueb_: 2wue B: [169641]
        automated match to d2puha1
        complexed with kek, scn; mutant
    3. Domains for 2wuf:
      1. 1004140Domain d2wufa_: 2wuf A: [169642]
        automated match to d2puha1
        complexed with gol, kem, scn; mutant
      2. 1004141Domain d2wufb_: 2wuf B: [169643]
        automated match to d2puha1
        complexed with gol, kem, scn; mutant
    4. Domains for 2wug:
      1. 1004136Domain d2wuga_: 2wug A: [169644]
        automated match to d2puha1
        complexed with gol, hpk, scn; mutant
      2. 1004137Domain d2wugb_: 2wug B: [169645]
        automated match to d2puha1
        complexed with gol, hpk, scn; mutant
  12. 1004144Norway rat (Rattus norvegicus) [TaxId:10116] [188292] (1 PDB entry)
  13. 1004149Pseudoalteromonas haloplanktis [TaxId:326442] [189288] (1 PDB entry)
  14. 1004154Pseudomonas aeruginosa [TaxId:208964] [189478] (1 PDB entry)
  15. 1004157Thale cress (Arabidopsis thaliana) [TaxId:3702] [188958] (1 PDB entry)
  16. 1004162Thermoplasma acidophilum [TaxId:273075] [188276] (1 PDB entry)
  17. 1004164Uncultured archaeon [TaxId:115547] [187518] (1 PDB entry)
  18. 1004167Yarrowia lipolytica [TaxId:4952] [189520] (1 PDB entry)

More info for Protein automated matches from c.69.1.0: automated matches

Timeline for Protein automated matches from c.69.1.0: automated matches: