Lineage for Protein: automated matches

  1. Root: SCOPe 2.02
  2. 1103260Class b: All beta proteins [48724] (174 folds)
  3. 1133645Fold b.61: Streptavidin-like [50875] (8 superfamilies)
    barrel, closed; n=8, S=10; meander
  4. 1133646Superfamily b.61.1: Avidin/streptavidin [50876] (2 families) (S)
  5. 1134033Family b.61.1.0: automated matches [191402] (1 protein)
    not a true family
  6. 1134034Protein automated matches [190537] (4 species)
    not a true protein

Species:

  1. 1134035Chicken (Gallus gallus) [TaxId:9031] [187505] (2 PDB entries)
    1. Domain for 2c1q:
    2. Domains for 2c1s:
      1. 1134036Domain d2c1sa_: 2c1s A: [163229]
        automated match to d1avdb_
        complexed with bso
      2. 1134037Domain d2c1sb_: 2c1s B: [163230]
        automated match to d1avdb_
        complexed with bso
  2. 1134039Pleurotus cornucopiae [TaxId:5321] [188786] (1 PDB entry)
  3. 1134042Shewanella denitrificans [TaxId:318161] [195517] (2 PDB entries)
    1. Domains for 3szi:
      1. 1134047Domain d3szia_: 3szi A: [195525]
        automated match to d1kl4b_
        complexed with fmt
      2. 1134048Domain d3szib_: 3szi B: [195523]
        automated match to d1kl4b_
        complexed with fmt
      3. 1134049Domain d3szic_: 3szi C: [195524]
        automated match to d1kl4b_
        complexed with fmt
      4. 1134050Domain d3szig_: 3szi G: [195526]
        automated match to d1kl4b_
        complexed with fmt
      5. 1134051Domain d3szih_: 3szi H: [195519]
        automated match to d1kl4b_
        complexed with fmt
      6. 1134052Domain d3szii_: 3szi I: [195522]
        automated match to d1kl4b_
        complexed with fmt
      7. 1134053Domain d3szij_: 3szi J: [195518]
        automated match to d1kl4b_
        complexed with fmt
      8. 1134054Domain d3szik_: 3szi K: [195520]
        automated match to d1kl4b_
        complexed with fmt
    2. Domains for 3t2x:
      1. 1134043Domain d3t2xa_: 3t2x A: [195605]
        automated match to d1kl4b_
        mutant
      2. 1134044Domain d3t2xb_: 3t2x B: [195603]
        automated match to d1kl4b_
        mutant
      3. 1134045Domain d3t2xc_: 3t2x C: [195602]
        automated match to d1kl4b_
        mutant
      4. 1134046Domain d3t2xd_: 3t2x D: [195606]
        automated match to d1kl4b_
        mutant
  4. 1134055Western clawed frog (Xenopus tropicalis) [TaxId:8364] [188454] (2 PDB entries)
    1. Domains for 2uyw:
      1. 1134056Domain d2uywa_: 2uyw A: [168249]
        automated match to d1rava_
        complexed with btn, fmt
      2. 1134057Domain d2uywd_: 2uyw D: [168250]
        automated match to d1rava_
        complexed with btn, fmt
    2. Domains for 2uz2:
      1. 1134058Domain d2uz2a_: 2uz2 A: [168252]
        automated match to d1rava_
        complexed with act, btn
      2. 1134059Domain d2uz2d_: 2uz2 D: [168253]
        automated match to d1rava_
        complexed with act, btn

More info for Protein automated matches from b.61.1.0: automated matches

Timeline for Protein automated matches from b.61.1.0: automated matches: