SCOPe 2.06: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.06
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.69: alpha/beta-Hydrolases [53473] (1 superfamily)
core: 3 layers, a/b/a; mixed beta-sheet of 8 strands, order 12435678, strand 2 is antiparallel to the rest
Superfamily c.69.1: alpha/beta-Hydrolases [53474] (42 families)
many members have left-handed crossover connection between strand 8 and additional strand 9
Family c.69.1.17: Fungal lipases [53558] (5 proteins)
Protein automated matches [190510] (5 species)
not a true protein

Species:

Aspergillus niger [TaxId:5061] [187463] (1 PDB entry)
- Domains for 2bjh:
  1. Domain d2bjha_: 2bjh A: [163103]
    automated match to d1uswa_
    complexed with fer, nag, ndg
  2. Domain d2bjhb_: 2bjh B: [163104]
    automated match to d1uswa_
    complexed with fer, nag, ndg
  3. Domain d2bjhc_: 2bjh C: [163105]
    automated match to d1uswa_
    complexed with fer, nag, ndg
Candida antarctica [TaxId:34362] [236429] (5 PDB entries)
1. Domains for 3w9b:
  1. Domain d3w9ba_: 3w9b A: [239905]
    automated match to d3w9bb_
    complexed with pe8
  2. Domain d3w9bb_: 3w9b B: [238325]
    automated match to d1tcaa_
    complexed with pe8
  3. Domain d3w9bc_: 3w9b C: [238327]
    automated match to d1tcaa_
    complexed with pe8
  4. Domain d3w9bd_: 3w9b D: [238326]
    automated match to d1tcaa_
    complexed with pe8
2. Domain for 4k5q:
  - Domain d4k5qa_: 4k5q A: [236431]
    automated match to d1tcaa_
    mutant
3. Domains for 4k6g:
  1. Domain d4k6ga1: 4k6g A:1-317 [236434]
    Other proteins in same PDB: d4k6ga2, d4k6ga3, d4k6gb2, d4k6gb3
    automated match to d1tcaa_
    complexed with edo
  2. Domain d4k6gb1: 4k6g B:1-317 [236433]
    Other proteins in same PDB: d4k6ga2, d4k6ga3, d4k6gb2, d4k6gb3
    automated match to d1tcaa_
    complexed with edo
4. Domains for 4k6h:
  1. Domain d4k6ha1: 4k6h A:1-317 [236430]
    Other proteins in same PDB: d4k6ha2, d4k6ha3, d4k6hb2, d4k6hb3
    automated match to d1tcaa_
    complexed with edo; mutant
  2. Domain d4k6hb1: 4k6h B:1-317 [236435]
    Other proteins in same PDB: d4k6ha2, d4k6ha3, d4k6hb2, d4k6hb3
    automated match to d1tcaa_
    complexed with edo; mutant
5. Domains for 4k6k:
  1. Domain d4k6ka_: 4k6k A: [236432]
    Other proteins in same PDB: d4k6kb2
    automated match to d1tcaa_
    complexed with edo; mutant
  2. Domain d4k6kb1: 4k6k B:1-317 [262809]
    Other proteins in same PDB: d4k6kb2
    automated match to d4k6ga_
    complexed with edo; mutant
Candida rugosa [TaxId:5481] [189895] (1 PDB entry)
- Domain for 3rar:
  - Domain d3rara_: 3rar A: [184873]
    automated match to d1clea_
    complexed with ca, ian, nag
Penicillium cyclopium [TaxId:60167] [316049] (1 PDB entry)
- Domain for 5ch8:
  - Domain d5ch8a_: 5ch8 A: [316050]
    automated match to d1tiaa_
    complexed with cl, gol, zn; mutant
Rhizopus microsporus [TaxId:4843] [261656] (1 PDB entry)
- Domain for 4l3w:
  - Domain d4l3wa_: 4l3w A: [261657]
    automated match to d1ticb_
    complexed with edo, so4

More info for Protein automated matches from c.69.1.17: Fungal lipases

Timeline for Protein automated matches from c.69.1.17: Fungal lipases:

Protein automated matches from c.69.1.17: Fungal lipases first appeared in SCOPe 2.01
Protein automated matches from c.69.1.17: Fungal lipases appears in SCOPe 2.05
Protein automated matches from c.69.1.17: Fungal lipases appears in SCOPe 2.07
Protein automated matches from c.69.1.17: Fungal lipases appears in the current release, SCOPe 2.08