Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2114950Fold c.41: Subtilisin-like [52742] (1 superfamily)
    3 layers: a/b/a, parallel beta-sheet of 7 strands, order 2314567; left-handed crossover connection between strands 2 & 3
  4. 2114951Superfamily c.41.1: Subtilisin-like [52743] (3 families) (S)
  5. 2115291Family c.41.1.0: automated matches [191390] (1 protein)
    not a true family
  6. 2115292Protein automated matches [190500] (8 species)
    not a true protein

Species:

  1. 2115293Human (Homo sapiens) [TaxId:9606] [255634] (7 PDB entries)
    1. Domain for 2w2m:
    2. Domain for 2w2n:
    3. Domain for 2w2o:
    4. Domain for 2w2p:
    5. Domain for 2w2q:
    6. Domain for 2xtj:
    7. Domains for 4ov6:
      1. 2115300Domain d4ov6b_: 4ov6 B: [263353]
        Other proteins in same PDB: d4ov6f_, d4ov6g_
        automated match to d2w2na_
        complexed with edo, pg4
      2. 2115301Domain d4ov6e_: 4ov6 E: [258045]
        Other proteins in same PDB: d4ov6f_, d4ov6g_
        automated match to d2w2na_
        complexed with edo, pg4
  2. 2115302Paecilomyces lilacinus [TaxId:33203] [189113] (1 PDB entry)
  3. 2115305Planktothrix agardhii [TaxId:443922] [234618] (1 PDB entry)
  4. 2115308Prochloron didemni [TaxId:1216] [194745] (3 PDB entries)
    1. Domain for 3zxx:
    2. Domain for 3zxy:
    3. Domain for 4h6v:
  5. 2115312Serratia sp. [TaxId:348903] [187445] (1 PDB entry)
  6. 2115314Thermus aquaticus [TaxId:271] [195744] (1 PDB entry)
  7. 2115316Vibrio sp. [TaxId:210249] [188018] (2 PDB entries)
    1. Domains for 1s2n:
      1. 2115319Domain d1s2na_: 1s2n A: [161704]
        automated match to d1bjre_
        complexed with ca, pms
      2. 2115320Domain d1s2nb_: 1s2n B: [161705]
        automated match to d1bjre_
        complexed with ca, pms
    2. Domains for 1sh7:
      1. 2115317Domain d1sh7a_: 1sh7 A: [161714]
        automated match to d1bjre_
        complexed with ca, pms
      2. 2115318Domain d1sh7b_: 1sh7 B: [161715]
        automated match to d1bjre_
        complexed with ca, pms
  8. 2297049Meiothermus taiwanensis [TaxId:1339250] [340350] (1 PDB entry)

More info for Protein automated matches from c.41.1.0: automated matches

Timeline for Protein automated matches from c.41.1.0: automated matches: