Species:

1. Acinetobacter baumannii [TaxId:405416] [340181] (1 PDB entry)

   • Domain for 5yh7:

     • Domain d5yh7a_: 5yh7 A: [340182] automated match to d3f3ma_ complexed with coa, so4

2. Acinetobacter baumannii [TaxId:470] [324884] (3 PDB entries)

   1. Domains for 5h16:

      1. Domain d5h16a_: 5h16 A: [324885] automated match to d3f3ma_ complexed with cit

      2. Domain d5h16b_: 5h16 B: [324981] automated match to d3f3ma_ complexed with cit

      3. Domain d5h16c_: 5h16 C: [324984] automated match to d3f3ma_ complexed with cit

      4. Domain d5h16d_: 5h16 D: [324888] automated match to d3f3ma_ complexed with cit

      5. Domain d5h16e_: 5h16 E: [324939] automated match to d3f3ma_ complexed with cit

      6. Domain d5h16f_: 5h16 F: [324930] automated match to d3f3ma_ complexed with cit

   2. Domains for 5h7x:

      1. Domain d5h7xa_: 5h7x A: [326959] Other proteins in same PDB: d5h7xe2, d5h7xf2 automated match to d3f3ma_ complexed with cit

      2. Domain d5h7xb_: 5h7x B: [326942] Other proteins in same PDB: d5h7xe2, d5h7xf2 automated match to d3f3ma_ complexed with cit

      3. Domain d5h7xc_: 5h7x C: [326945] Other proteins in same PDB: d5h7xe2, d5h7xf2 automated match to d3f3ma_ complexed with cit

      4. Domain d5h7xd_: 5h7x D: [326943] Other proteins in same PDB: d5h7xe2, d5h7xf2 automated match to d3f3ma_ complexed with cit

      5. Domain d5h7xe1: 5h7x E:1-163 [326974] Other proteins in same PDB: d5h7xe2, d5h7xf2 automated match to d3f3ma_ complexed with cit

      6. Domain d5h7xf1: 5h7x F:1-163 [326940] Other proteins in same PDB: d5h7xe2, d5h7xf2 automated match to d3f3ma_ complexed with cit

   3. Domain for 5yrr:

      • Domain d5yrra_: 5yrr A: [341965] automated match to d3f3ma_ complexed with coa, so4

3. Aeropyrum pernix [TaxId:56636] [189259] (3 PDB entries)

   1. Domain for 2cya:

      • Domain d2cyaa_: 2cya A: [264246] automated match to d2dlcx_ complexed with so4

   2. Domain for 3a04:

      • Domain d3a04a_: 3a04 A: [171622] automated match to d1ulhb_ complexed with cd, sf4

   3. Domain for 3a05:

      • Domain d3a05a_: 3a05 A: [171623] automated match to d1ulhb_ protein/RNA complex; complexed with cd, sf4, trp

4. Aquifex aeolicus [TaxId:63363] [230619] (2 PDB entries)

   1. Domains for 2csx:

      1. Domain d2csxa1: 2csx A:1-346 [230621] Other proteins in same PDB: d2csxa2, d2csxb2 automated match to d1a8ha2 protein/RNA complex

      2. Domain d2csxb1: 2csx B:1-346 [230622] Other proteins in same PDB: d2csxa2, d2csxb2 automated match to d1a8ha2 protein/RNA complex

   2. Domains for 2ct8:

      1. Domain d2ct8a1: 2ct8 A:1-346 [241484] Other proteins in same PDB: d2ct8a2, d2ct8b2 automated match to d2csxa1 protein/RNA complex; complexed with msp

      2. Domain d2ct8b1: 2ct8 B:1-346 [241486] Other proteins in same PDB: d2ct8a2, d2ct8b2 automated match to d2csxa1 protein/RNA complex; complexed with msp

5. Bacillus subtilis [TaxId:1423] [256024] (1 PDB entry)

   • Domains for 3prh:

     1. Domain d3prha_: 3prh A: [248627] automated match to d2yy5b_ mutant

     2. Domain d3prhb_: 3prh B: [248628] automated match to d2yy5b_ mutant

6. Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [255117] (2 PDB entries)

   1. Domain for 2dlc:

      • Domain d2dlcx_: 2dlc X: [241592] automated match to d1n3la_ protein/RNA complex; complexed with mg, ymp

   2. Domain for 2ip1:

      • Domain d2ip1a_: 2ip1 A: [242168] automated match to d1ulhb_ complexed with pg4

7. Borrelia burgdorferi [TaxId:224326] [226461] (1 PDB entry)

   • Domains for 4gri:

     1. Domain d4gria1: 4gri A:3-314 [222100] Other proteins in same PDB: d4gria2, d4grib2 automated match to d1glna2 complexed with cl, glu, zn

     2. Domain d4grib1: 4gri B:3-314 [222102] Other proteins in same PDB: d4gria2, d4grib2 automated match to d1glna2 complexed with cl, glu, zn

8. Brucella melitensis [TaxId:29459] [225767] (1 PDB entry)

   • Domains for 3inn:

     1. Domain d3inna1: 3inn A:1-282 [211822] Other proteins in same PDB: d3inna2, d3innb2, d3innc2, d3innd2 automated match to d3mueb_ complexed with atp, unx

     2. Domain d3innb1: 3inn B:1-286 [211823] Other proteins in same PDB: d3inna2, d3innb2, d3innc2, d3innd2 automated match to d3mueb_ complexed with atp, unx

     3. Domain d3innc1: 3inn C:1-283 [211824] Other proteins in same PDB: d3inna2, d3innb2, d3innc2, d3innd2 automated match to d3mueb_ complexed with atp, unx

     4. Domain d3innd1: 3inn D:1-286 [211825] Other proteins in same PDB: d3inna2, d3innb2, d3innc2, d3innd2 automated match to d3mueb_ complexed with atp, unx

9. Burkholderia pseudomallei [TaxId:320372] [189579] (3 PDB entries)

   1. Domain for 3ikz:

      • Domain d3ikza1: 3ikz A:1-161 [305568] Other proteins in same PDB: d3ikza2 automated match to d3k9wa_ complexed with cod, gol, so4

   2. Domain for 3k9w:

      • Domain d3k9wa1: 3k9w A:1-161 [212254] Other proteins in same PDB: d3k9wa2 automated match to d3pxua_ complexed with 4ps, act, ade, pg4, so4

   3. Domain for 3pxu:

      • Domain d3pxua1: 3pxu A:1-161 [184069] Other proteins in same PDB: d3pxua2 automated match to d1b6ta_ complexed with cod, gol, so4

10. Burkholderia thailandensis [TaxId:271848] [189811] (3 PDB entries)

    1. Domains for 3uk2:

       1. Domain d3uk2a1: 3uk2 A:1-279 [186333] Other proteins in same PDB: d3uk2a2, d3uk2b2 automated match to d1ihoa_ complexed with amp, cl, edo, mlt

       2. Domain d3uk2b1: 3uk2 B:1-279 [186334] Other proteins in same PDB: d3uk2a2, d3uk2b2 automated match to d1ihoa_ complexed with amp, cl, edo, mlt

    2. Domain for 4g6z:

       • Domain d4g6za1: 4g6z A:3-304 [221733] Other proteins in same PDB: d4g6za2 automated match to d1glna2 complexed with cl, glu, mpd, na

    3. Domains for 4wso:

       1. Domain d4wsoa_: 4wso A: [261007] automated match to d1yuma_ complexed with nad, po4

       2. Domain d4wsob_: 4wso B: [264141] automated match to d4wsoa_ complexed with nad, po4

11. Campylobacter jejuni [TaxId:192222] [189366] (4 PDB entries)

    1. Domains for 3m5w:

       1. Domain d3m5wa1: 3m5w A:1-319 [259796] Other proteins in same PDB: d3m5wa2, d3m5wb2 automated match to d3sz3a_ complexed with gol, so4

       2. Domain d3m5wb1: 3m5w B:1-319 [259797] Other proteins in same PDB: d3m5wa2, d3m5wb2 automated match to d3sz3a_ complexed with gol, so4

    2. Domain for 3mxt:

       • Domain d3mxta1: 3mxt A:1-282 [181686] Other proteins in same PDB: d3mxta2 automated match to d1v8fa_ complexed with cl, fmt, gol, mg, so4

    3. Domains for 3tzl:

       1. Domain d3tzla_: 3tzl A: [186028] Other proteins in same PDB: d3tzlb2 automated match to d1i6ka_ protein/RNA complex; complexed with adp, na, po4, trp

       2. Domain d3tzlb1: 3tzl B:1-319 [186029] Other proteins in same PDB: d3tzlb2 automated match to d1i6ka_ protein/RNA complex; complexed with adp, na, po4, trp

    4. Domain for 3uy4:

       • Domain d3uy4a1: 3uy4 A:1-282 [186432] Other proteins in same PDB: d3uy4a2 automated match to d1v8fa_ complexed with amp, gol, pau

12. Coxiella burnetii [TaxId:227377] [195012] (1 PDB entry)

    • Domains for 4f3r:

      1. Domain d4f3ra_: 4f3r A: [201988] automated match to d4f3rc_ complexed with ca

      2. Domain d4f3rb_: 4f3r B: [201989] automated match to d4f3rc_ complexed with ca

      3. Domain d4f3rc_: 4f3r C: [195013] automated match to d3l93a_ complexed with ca

13. Coxiella burnetii [TaxId:777] [226213] (1 PDB entry)

    • Domain for 3tqo:

      • Domain d3tqoa1: 3tqo A:1-316 [216982] Other proteins in same PDB: d3tqoa2, d3tqoa3 automated match to d1u0bb2 complexed with zn

14. Cryptosporidium parvum [TaxId:353152] [188948] (1 PDB entry)

    • Domains for 3hv0:

      1. Domain d3hv0a_: 3hv0 A: [177854] automated match to d1ulhb_ complexed with trp

      2. Domain d3hv0b_: 3hv0 B: [177855] automated match to d1ulhb_ complexed with trp

15. Deinococcus radiodurans [TaxId:1299] [187374] (2 PDB entries)

    1. Domains for 1yid:

       1. Domain d1yida_: 1yid A: [203195] automated match to d2g36a_ protein/RNA complex; complexed with atp, mg

       2. Domain d1yidb_: 1yid B: [203196] automated match to d2g36a_ protein/RNA complex; complexed with atp, mg

       3. Domain d1yidc_: 1yid C: [203197] automated match to d2g36a_ protein/RNA complex; complexed with atp, mg

    2. Domains for 2a4m:

       1. Domain d2a4ma_: 2a4m A: [162674] automated match to d1i6ka_ complexed with trp

       2. Domain d2a4mb_: 2a4m B: [162675] automated match to d1i6ka_ complexed with trp

       3. Domain d2a4mc_: 2a4m C: [162676] automated match to d1i6ka_ complexed with trp

16. Deinococcus radiodurans [TaxId:243230] [224963] (1 PDB entry)

    • Domains for 1yi8:

      1. Domain d1yi8a_: 1yi8 A: [203192] automated match to d2g36a_ protein/RNA complex; complexed with trp

      2. Domain d1yi8b_: 1yi8 B: [203193] automated match to d2g36a_ protein/RNA complex; complexed with trp

      3. Domain d1yi8c_: 1yi8 C: [203194] automated match to d2g36a_ protein/RNA complex; complexed with trp

17. Encephalitozoon cuniculi [TaxId:284813] [226231] (1 PDB entry)

    • Domains for 3tze:

      1. Domain d3tzea_: 3tze A: [217115] automated match to d1ulhb_ complexed with k, trp

      2. Domain d3tzeb_: 3tze B: [217116] automated match to d1ulhb_ complexed with k, trp

18. Entamoeba (Entamoeba histolytica) [TaxId:5759] [255876] (1 PDB entry)

    • Domains for 3hzr:

      1. Domain d3hzra_: 3hzr A: [246634] automated match to d1ulhb_

      2. Domain d3hzrb_: 3hzr B: [246635] automated match to d1ulhb_

      3. Domain d3hzrc_: 3hzr C: [246636] automated match to d1ulhb_

      4. Domain d3hzrd_: 3hzr D: [246637] automated match to d1ulhb_

      5. Domain d3hzre_: 3hzr E: [246638] automated match to d1ulhb_

      6. Domain d3hzrf_: 3hzr F: [246639] automated match to d1ulhb_

19. Enterococcus faecalis [TaxId:1351] [189996] (3 PDB entries)

    1. Domains for 3nd5:

       1. Domain d3nd5a_: 3nd5 A: [182156] automated match to d1gn8a_

       2. Domain d3nd5b_: 3nd5 B: [182157] automated match to d1gn8a_

       3. Domain d3nd5c_: 3nd5 C: [182158] automated match to d1gn8a_

       4. Domain d3nd5d_: 3nd5 D: [182159] automated match to d1gn8a_

       5. Domain d3nd5e_: 3nd5 E: [182160] automated match to d1gn8a_

       6. Domain d3nd5f_: 3nd5 F: [182161] automated match to d1gn8a_

    2. Domains for 3nd6:

       1. Domain d3nd6a_: 3nd6 A: [182162] automated match to d1gn8a_ complexed with atp

       2. Domain d3nd6b_: 3nd6 B: [182163] automated match to d1gn8a_ complexed with atp

       3. Domain d3nd6c_: 3nd6 C: [182164] automated match to d1gn8a_ complexed with atp

       4. Domain d3nd6d_: 3nd6 D: [182165] automated match to d1gn8a_ complexed with atp

       5. Domain d3nd6e_: 3nd6 E: [182166] automated match to d1gn8a_ complexed with atp

       6. Domain d3nd6f_: 3nd6 F: [182167] automated match to d1gn8a_ complexed with atp

    3. Domains for 3nd7:

       1. Domain d3nd7a_: 3nd7 A: [182168] automated match to d1gn8a_ complexed with pny

       2. Domain d3nd7b_: 3nd7 B: [182169] automated match to d1gn8a_ complexed with pny

       3. Domain d3nd7c_: 3nd7 C: [182170] automated match to d1gn8a_ complexed with pny

       4. Domain d3nd7d_: 3nd7 D: [182171] automated match to d1gn8a_ complexed with pny

       5. Domain d3nd7e_: 3nd7 E: [182172] automated match to d1gn8a_ complexed with pny

       6. Domain d3nd7f_: 3nd7 F: [182173] automated match to d1gn8a_ complexed with pny

20. Francisella tularensis [TaxId:177416] [196438] (3 PDB entries)

    1. Domains for 3n8h:

       1. Domain d3n8ha1: 3n8h A:1-261 [199939] Other proteins in same PDB: d3n8ha2, d3n8hb2 automated match to d3n8hb_ complexed with acy, amp, gol, pro

       2. Domain d3n8hb1: 3n8h B:1-261 [196439] Other proteins in same PDB: d3n8ha2, d3n8hb2 automated match to d2ejca_ complexed with acy, amp, gol, pro

    2. Domains for 3qtt:

       1. Domain d3qtta_: 3qtt A: [215410] automated match to d3n8hb_ complexed with anp, bal, mg, pro

       2. Domain d3qttb_: 3qtt B: [215411] automated match to d3n8hb_ complexed with anp, bal, mg, pro

    3. Domains for 5hg0:

       1. Domain d5hg0a1: 5hg0 A:1-260 [315411] Other proteins in same PDB: d5hg0a2, d5hg0b2 automated match to d3qtta_ complexed with sam

       2. Domain d5hg0b1: 5hg0 B:1-261 [314684] Other proteins in same PDB: d5hg0a2, d5hg0b2 automated match to d3qtta_ complexed with sam

21. Helicobacter pylori [TaxId:563041] [339431] (1 PDB entry)

    • Domain for 6b1p:

      • Domain d6b1pa1: 6b1p A:2-299 [339432] Other proteins in same PDB: d6b1pa2 automated match to d4g6za1 complexed with edo

22. Helicobacter pylori [TaxId:85962] [193641] (2 PDB entries)

    1. Domain for 3nv7:

       • Domain d3nv7a_: 3nv7 A: [196331] automated match to d1gn8a_ complexed with acy, so4; mutant

    2. Domains for 3otw:

       1. Domain d3otwa_: 3otw A: [200158] automated match to d3otwf_ complexed with coa, so4

       2. Domain d3otwb_: 3otw B: [200159] automated match to d3otwf_ complexed with coa, so4

       3. Domain d3otwc_: 3otw C: [200160] automated match to d3otwf_ complexed with coa, so4

       4. Domain d3otwd_: 3otw D: [200161] automated match to d3otwf_ complexed with coa, so4

       5. Domain d3otwe_: 3otw E: [200162] automated match to d3otwf_ complexed with coa, so4

       6. Domain d3otwf_: 3otw F: [193642] automated match to d1gn8a_ complexed with coa, so4

23. Human (Homo sapiens) [TaxId:9606] [188230] (4 PDB entries)

    1. Domains for 2pid:

       1. Domain d2pida_: 2pid A: [167192] automated match to d1tyae_ protein/RNA complex; complexed with ysa

       2. Domain d2pidb_: 2pid B: [167193] automated match to d1tyae_ protein/RNA complex; complexed with ysa

    2. Domains for 2qjf:

       1. Domain d2qjfa2: 2qjf A:393-622 [205828] Other proteins in same PDB: d2qjfa1, d2qjfb1 automated match to d1jhda2 complexed with adx, k

       2. Domain d2qjfb2: 2qjf B:393-622 [205830] Other proteins in same PDB: d2qjfa1, d2qjfb1 automated match to d1jhda2 complexed with adx, k

    3. Domains for 3zxi:

       1. Domain d3zxia_: 3zxi A: [186656] automated match to d1tyae_ protein/RNA complex; complexed with tya

       2. Domain d3zxib_: 3zxi B: [186657] automated match to d1tyae_ protein/RNA complex; complexed with tya

    4. Domains for 5ekd:

       1. Domain d5ekda_: 5ekd A: [326333] automated match to d2el7b_ protein/RNA complex; complexed with 5bx, atp, gol, mn

       2. Domain d5ekdb_: 5ekd B: [326278] automated match to d2el7b_ protein/RNA complex; complexed with 5bx, atp, gol, mn

24. Leishmania major [TaxId:5664] [267846] (1 PDB entry)

    • Domain for 3kfl:

      • Domain d3kfla1: 3kfl A:207-574 [264972] Other proteins in same PDB: d3kfla2 automated match to d4eg8b1 protein/RNA complex; complexed with edo, fmt, me8, mg, pop, zn

25. Mycobacterium abscessus [TaxId:561007] [312100] (12 PDB entries)

    1. Domains for 4ymi:

       1. Domain d4ymia_: 4ymi A: [312101] automated match to d2qtra_ complexed with ade, nap

       2. Domain d4ymib_: 4ymi B: [312155] automated match to d2qtra_ complexed with ade, nap

    2. Domains for 5db4:

       1. Domain d5db4a_: 5db4 A: [321696] automated match to d4ymib_ complexed with atp, mg

       2. Domain d5db4b_: 5db4 B: [321755] automated match to d4ymib_ complexed with atp, mg

    3. Domains for 5deo:

       1. Domain d5deoa_: 5deo A: [321692] automated match to d4ymib_ complexed with dnd

       2. Domain d5deob_: 5deo B: [321727] automated match to d4ymib_ complexed with dnd

       3. Domain d5deoc_: 5deo C: [321693] automated match to d4ymib_ complexed with dnd

       4. Domain d5deod_: 5deo D: [321810] automated match to d4ymib_ complexed with dnd

    4. Domains for 5o06:

       1. Domain d5o06a_: 5o06 A: [336134] automated match to d4rukb_ complexed with edo

       2. Domain d5o06b_: 5o06 B: [336216] automated match to d4rukb_ complexed with edo

       3. Domain d5o06c_: 5o06 C: [336168] automated match to d4rukb_ complexed with edo

    5. Domains for 5o08:

       1. Domain d5o08a_: 5o08 A: [336121] Other proteins in same PDB: d5o08c2 automated match to d4rukb_ complexed with cod, edo

       2. Domain d5o08b_: 5o08 B: [336122] Other proteins in same PDB: d5o08c2 automated match to d4rukb_ complexed with cod, edo

       3. Domain d5o08c1: 5o08 C:1-157 [336127] Other proteins in same PDB: d5o08c2 automated match to d4rukb_ complexed with cod, edo

    6. Domains for 5o0a:

       1. Domain d5o0aa_: 5o0a A: [336158] automated match to d4rukb_ complexed with 9fh

       2. Domain d5o0ab_: 5o0a B: [336119] automated match to d4rukb_ complexed with 9fh

       3. Domain d5o0ac_: 5o0a C: [336118] automated match to d4rukb_ complexed with 9fh

    7. Domains for 5o0b:

       1. Domain d5o0ba_: 5o0b A: [336138] automated match to d4rukb_ complexed with 9fe

       2. Domain d5o0bb_: 5o0b B: [336195] automated match to d4rukb_ complexed with 9fe

       3. Domain d5o0bc_: 5o0b C: [336139] automated match to d4rukb_ complexed with 9fe

    8. Domains for 5o0c:

       1. Domain d5o0ca_: 5o0c A: [336228] automated match to d4rukb_ complexed with 9f8

       2. Domain d5o0cb_: 5o0c B: [336222] automated match to d4rukb_ complexed with 9f8

       3. Domain d5o0cc_: 5o0c C: [336178] automated match to d4rukb_ complexed with 9f8

    9. Domains for 5o0d:

       1. Domain d5o0da_: 5o0d A: [336177] Other proteins in same PDB: d5o0dc2 automated match to d4rukb_ complexed with 9f5

       2. Domain d5o0db_: 5o0d B: [336161] Other proteins in same PDB: d5o0dc2 automated match to d4rukb_ complexed with 9f5

       3. Domain d5o0dc1: 5o0d C:1-157 [336145] Other proteins in same PDB: d5o0dc2 automated match to d4rukb_ complexed with 9f5

    10. Domains for 5o0f:

        1. Domain d5o0fa_: 5o0f A: [336140] automated match to d4rukb_ complexed with iop

        2. Domain d5o0fb_: 5o0f B: [336234] automated match to d4rukb_ complexed with iop

        3. Domain d5o0fc_: 5o0f C: [336167] automated match to d4rukb_ complexed with iop

    11. Domains for 5o0h:

        1. Domain d5o0ha_: 5o0h A: [336169] Other proteins in same PDB: d5o0hc2 automated match to d4rukb_ complexed with 9fn

        2. Domain d5o0hb_: 5o0h B: [336170] Other proteins in same PDB: d5o0hc2 automated match to d4rukb_ complexed with 9fn

        3. Domain d5o0hc1: 5o0h C:1-157 [336196] Other proteins in same PDB: d5o0hc2 automated match to d4rukb_ complexed with 9fn

    12. Domains for 5vir:

        1. Domain d5vira_: 5vir A: [333551] automated match to d4ymib_ complexed with 9cg, nap

        2. Domain d5virb_: 5vir B: [333566] automated match to d4ymib_ complexed with 9cg, nap

26. Mycobacterium smegmatis [TaxId:246196] [231529] (2 PDB entries)

    1. Domain for 2x1l:

       • Domain d2x1la1: 2x1l A:2-135,A:136-353 [231530] Other proteins in same PDB: d2x1la2, d2x1lb1, d2x1lc1 automated match to d4eg3b1 protein/RNA complex; complexed with 2hp, adn, cxs, met

    2. Domain for 2x1m:

       • Domain d2x1ma1: 2x1m A:2-135,A:136-353 [231535] Other proteins in same PDB: d2x1ma2 automated match to d4eg3b1 protein/RNA complex; complexed with 2hp, cxs, met

27. Mycobacterium tuberculosis [TaxId:1773] [226769] (4 PDB entries)

    1. Domains for 3nba:

       1. Domain d3nbaa_: 3nba A: [213861] automated match to d3f3ma_ complexed with apc, mg

       2. Domain d3nbab_: 3nba B: [213862] automated match to d3f3ma_ complexed with apc, mg

       3. Domain d3nbac_: 3nba C: [213863] automated match to d3f3ma_ complexed with apc, mg

       4. Domain d3nbad_: 3nba D: [213864] automated match to d3f3ma_ complexed with apc, mg

    2. Domains for 3nbk:

       1. Domain d3nbka1: 3nbk A:1-157 [213869] Other proteins in same PDB: d3nbka2, d3nbkb2, d3nbkc2, d3nbkd2 automated match to d3f3ma_ complexed with ni, pns

       2. Domain d3nbkb1: 3nbk B:1-157 [213870] Other proteins in same PDB: d3nbka2, d3nbkb2, d3nbkc2, d3nbkd2 automated match to d3f3ma_ complexed with ni, pns

       3. Domain d3nbkc1: 3nbk C:1-157 [213871] Other proteins in same PDB: d3nbka2, d3nbkb2, d3nbkc2, d3nbkd2 automated match to d3f3ma_ complexed with ni, pns

       4. Domain d3nbkd1: 3nbk D:1-157 [213872] Other proteins in same PDB: d3nbka2, d3nbkb2, d3nbkc2, d3nbkd2 automated match to d3f3ma_ complexed with ni, pns

    3. Domains for 3pnb:

       1. Domain d3pnba_: 3pnb A: [214877] automated match to d3f3ma_ complexed with coa

       2. Domain d3pnbb_: 3pnb B: [214878] automated match to d3f3ma_ complexed with coa

       3. Domain d3pnbc_: 3pnb C: [214879] automated match to d3f3ma_ complexed with coa

       4. Domain d3pnbd_: 3pnb D: [214880] automated match to d3f3ma_ complexed with coa

    4. Domains for 4rpi:

       1. Domain d4rpia1: 4rpi A:9-201 [268766] Other proteins in same PDB: d4rpia2, d4rpib2, d4rpic2, d4rpid2 automated match to d1yula_ complexed with dms, epe

       2. Domain d4rpib1: 4rpi B:9-200 [268764] Other proteins in same PDB: d4rpia2, d4rpib2, d4rpic2, d4rpid2 automated match to d1yula_ complexed with dms, epe

       3. Domain d4rpic1: 4rpi C:9-200 [268767] Other proteins in same PDB: d4rpia2, d4rpib2, d4rpic2, d4rpid2 automated match to d1yula_ complexed with dms, epe

       4. Domain d4rpid1: 4rpi D:9-201 [268768] Other proteins in same PDB: d4rpia2, d4rpib2, d4rpic2, d4rpid2 automated match to d1yula_ complexed with dms, epe

28. Mycobacterium tuberculosis [TaxId:83332] [269137] (4 PDB entries)

    1. Domains for 4s1o:

       1. Domain d4s1oa_: 4s1o A: [311704] automated match to d1yula_ complexed with cl, nap

       2. Domain d4s1ob_: 4s1o B: [311597] automated match to d1yula_ complexed with cl, nap

    2. Domains for 4x0e:

       1. Domain d4x0ea1: 4x0e A:9-199 [269139] Other proteins in same PDB: d4x0ea2, d4x0eb2 automated match to d1yuma_ complexed with mes, so4

       2. Domain d4x0eb1: 4x0e B:9-199 [269138] Other proteins in same PDB: d4x0ea2, d4x0eb2 automated match to d1yuma_ complexed with mes, so4

    3. Domains for 4ybr:

       1. Domain d4ybra1: 4ybr A:4-200 [313478] Other proteins in same PDB: d4ybra2, d4ybrb2 automated match to d1yula_ complexed with cl, epe, nap, so4

       2. Domain d4ybrb1: 4ybr B:4-200 [312245] Other proteins in same PDB: d4ybra2, d4ybrb2 automated match to d1yula_ complexed with cl, epe, nap, so4

    4. Domains for 5das:

       1. Domain d5dasa1: 5das A:4-200 [321706] Other proteins in same PDB: d5dasa2, d5dasb2, d5dasc2, d5dasd2 automated match to d4s1ob_ complexed with nap

       2. Domain d5dasb1: 5das B:4-200 [321694] Other proteins in same PDB: d5dasa2, d5dasb2, d5dasc2, d5dasd2 automated match to d4s1ob_ complexed with nap

       3. Domain d5dasc1: 5das C:4-200 [321682] Other proteins in same PDB: d5dasa2, d5dasb2, d5dasc2, d5dasd2 automated match to d4s1ob_ complexed with nap

       4. Domain d5dasd1: 5das D:4-200 [321785] Other proteins in same PDB: d5dasa2, d5dasb2, d5dasc2, d5dasd2 automated match to d4s1ob_ complexed with nap

29. Mycoplasma pneumoniae [TaxId:272634] [188426] (1 PDB entry)

    • Domains for 2yy5:

      1. Domain d2yy5a_: 2yy5 A: [170923] automated match to d1i6ka_ complexed with so4, wsa

      2. Domain d2yy5b_: 2yy5 B: [170924] automated match to d1i6ka_ complexed with so4, wsa

      3. Domain d2yy5c_: 2yy5 C: [170925] automated match to d1i6ka_ complexed with so4, wsa

      4. Domain d2yy5d_: 2yy5 D: [170926] automated match to d1i6ka_ complexed with so4, wsa

30. Neisseria gonorrhoeae [TaxId:242231] [323751] (2 PDB entries)

    1. Domains for 5tev:

       1. Domain d5teva_: 5tev A: [323772] automated match to d3prha_

       2. Domain d5tevb_: 5tev B: [323756] automated match to d3prha_

    2. Domain for 5tew:

       • Domain d5tewa_: 5tew A: [323752] automated match to d3prha_ complexed with so4, trp

31. Neisseria gonorrhoeae [TaxId:521006] [320111] (2 PDB entries)

    1. Domains for 5kwv:

       1. Domain d5kwva1: 5kwv A:21-278 [320112] Other proteins in same PDB: d5kwva2, d5kwvb2 automated match to d1ihoa_ complexed with anp

       2. Domain d5kwvb1: 5kwv B:21-276 [320136] Other proteins in same PDB: d5kwva2, d5kwvb2 automated match to d1ihoa_ complexed with anp

    2. Domains for 5ucr:

       1. Domain d5ucra1: 5ucr A:21-278 [328355] Other proteins in same PDB: d5ucra2, d5ucrb2 automated match to d1ihoa_ complexed with ala, anp, mg

       2. Domain d5ucrb1: 5ucr B:21-275 [328348] Other proteins in same PDB: d5ucra2, d5ucrb2 automated match to d1ihoa_ complexed with ala, anp, mg

32. Plasmodium falciparum [TaxId:36329] [269943] (7 PDB entries)

    1. Domains for 3vgj:

       1. Domain d3vgja_: 3vgj A: [269945] automated match to d2cyaa_ protein/RNA complex; complexed with amp, tyr

       2. Domain d3vgjb_: 3vgj B: [269944] automated match to d2cyaa_ protein/RNA complex; complexed with amp, tyr

    2. Domain for 4zcq:

       • Domain d4zcqa_: 4zcq A: [322774] automated match to d1coza_ complexed with cht

    3. Domain for 4zcr:

       • Domain d4zcra_: 4zcr A: [322807] automated match to d1coza_ complexed with pc

    4. Domains for 4zcs:

       1. Domain d4zcsa_: 4zcs A: [321593] automated match to d1coza_ complexed with cdc, p33

       2. Domain d4zcsb_: 4zcs B: [321603] automated match to d1coza_ complexed with cdc, p33

       3. Domain d4zcsc_: 4zcs C: [321661] automated match to d1coza_ complexed with cdc, p33

       4. Domain d4zcsd_: 4zcs D: [321596] automated match to d1coza_ complexed with cdc, p33

       5. Domain d4zcse_: 4zcs E: [321618] automated match to d1coza_ complexed with cdc, p33

       6. Domain d4zcsf_: 4zcs F: [321653] automated match to d1coza_ complexed with cdc, p33

    5. Domain for 4zct:

       • Domain d4zcta_: 4zct A: [322749] automated match to d1coza_

    6. Domains for 5llt:

       1. Domain d5llta1: 5llt A:3-205 [326711] Other proteins in same PDB: d5llta2, d5lltb2 automated match to d4ymia_ complexed with dnd, edo, peg

       2. Domain d5lltb1: 5llt B:3-205 [326740] Other proteins in same PDB: d5llta2, d5lltb2 automated match to d4ymia_ complexed with dnd, edo, peg

    7. Domain for 5lm3:

       • Domain d5lm3a1: 5lm3 A:3-205 [326726] Other proteins in same PDB: d5lm3a2 automated match to d4ymia_ complexed with apc, edo

33. Plasmodium falciparum [TaxId:5833] [322782] (1 PDB entry)

    • Domain for 4zcp:

      • Domain d4zcpa_: 4zcp A: [322783] automated match to d1coza_ complexed with c5p

34. Pneumococcus (Streptococcus pneumoniae) [TaxId:1313] [225990] (1 PDB entry)

    • Domains for 3op1:

      1. Domain d3op1a1: 3op1 A:1-185 [214453] Other proteins in same PDB: d3op1a2, d3op1b2, d3op1c2 automated match to d1mrza2 complexed with acy, cl, gol, peg, so4

      2. Domain d3op1b1: 3op1 B:2-185 [214455] Other proteins in same PDB: d3op1a2, d3op1b2, d3op1c2 automated match to d1mrza2 complexed with acy, cl, gol, peg, so4

      3. Domain d3op1c1: 3op1 C:1-185 [214457] Other proteins in same PDB: d3op1a2, d3op1b2, d3op1c2 automated match to d1mrza2 complexed with acy, cl, gol, peg, so4

35. Pseudomonas aeruginosa [TaxId:287] [254992] (3 PDB entries)

    1. Domain for 1yul:

       • Domain d1yula_: 1yul A: [241066] automated match to d1k4kd_ complexed with cit

    2. Domains for 1yum:

       1. Domain d1yuma_: 1yum A: [241067] automated match to d1k4kd_ complexed with cit, ncn

       2. Domain d1yumb_: 1yum B: [241068] automated match to d1k4kd_ complexed with cit, ncn

       3. Domain d1yumc_: 1yum C: [241069] automated match to d1k4kd_ complexed with cit, ncn

       4. Domain d1yumd_: 1yum D: [241070] automated match to d1k4kd_ complexed with cit, ncn

    3. Domains for 1yun:

       1. Domain d1yuna_: 1yun A: [241071] automated match to d1k4kd_ complexed with atp, mg

       2. Domain d1yunb_: 1yun B: [241072] automated match to d1k4kd_ complexed with atp, mg

36. Pseudomonas aeruginosa, PA01 [TaxId:208964] [273424] (1 PDB entry)

    • Domains for 5bnz:

      1. Domain d5bnza1: 5bnz A:8-340 [273428] Other proteins in same PDB: d5bnza2, d5bnzb2 automated match to d4jxxa1 complexed with cl, so4

      2. Domain d5bnzb1: 5bnz B:8-340 [273425] Other proteins in same PDB: d5bnza2, d5bnzb2 automated match to d4jxxa1 complexed with cl, so4

37. Pyrococcus horikoshii [TaxId:53953] [255901] (1 PDB entry)

    • Domains for 3jxe:

      1. Domain d3jxea_: 3jxe A: [247070] automated match to d1ulhb_ protein/RNA complex; complexed with so4, tym

      2. Domain d3jxeb_: 3jxe B: [247071] automated match to d1ulhb_ protein/RNA complex; complexed with so4, tym

38. Soybean (Glycine max) [TaxId:3847] [237649] (1 PDB entry)

    • Domains for 4maf:

      1. Domain d4mafa2: 4maf A:219-449 [237650] Other proteins in same PDB: d4mafa1, d4mafb1, d4mafb3, d4mafc1, d4mafc3, d4mafd1, d4mafe1, d4mafe3, d4maff1, d4mafg1, d4mafg3, d4mafh1 automated match to d1g8fa2 complexed with adx

      2. Domain d4mafb2: 4maf B:219-449 [238194] Other proteins in same PDB: d4mafa1, d4mafb1, d4mafb3, d4mafc1, d4mafc3, d4mafd1, d4mafe1, d4mafe3, d4maff1, d4mafg1, d4mafg3, d4mafh1 automated match to d4mafc2 complexed with adx

      3. Domain d4mafc2: 4maf C:219-449 [237651] Other proteins in same PDB: d4mafa1, d4mafb1, d4mafb3, d4mafc1, d4mafc3, d4mafd1, d4mafe1, d4mafe3, d4maff1, d4mafg1, d4mafg3, d4mafh1 automated match to d1g8fa2 complexed with adx

      4. Domain d4mafd2: 4maf D:219-448 [238196] Other proteins in same PDB: d4mafa1, d4mafb1, d4mafb3, d4mafc1, d4mafc3, d4mafd1, d4mafe1, d4mafe3, d4maff1, d4mafg1, d4mafg3, d4mafh1 automated match to d4mafa2 complexed with adx

      5. Domain d4mafe2: 4maf E:219-449 [238198] Other proteins in same PDB: d4mafa1, d4mafb1, d4mafb3, d4mafc1, d4mafc3, d4mafd1, d4mafe1, d4mafe3, d4maff1, d4mafg1, d4mafg3, d4mafh1 automated match to d4mafc2 complexed with adx

      6. Domain d4maff2: 4maf F:219-448 [238202] Other proteins in same PDB: d4mafa1, d4mafb1, d4mafb3, d4mafc1, d4mafc3, d4mafd1, d4mafe1, d4mafe3, d4maff1, d4mafg1, d4mafg3, d4mafh1 automated match to d4mafa2 complexed with adx

      7. Domain d4mafg2: 4maf G:219-449 [238200] Other proteins in same PDB: d4mafa1, d4mafb1, d4mafb3, d4mafc1, d4mafc3, d4mafd1, d4mafe1, d4mafe3, d4maff1, d4mafg1, d4mafg3, d4mafh1 automated match to d4mafc2 complexed with adx

      8. Domain d4mafh2: 4maf H:219-445 [238204] Other proteins in same PDB: d4mafa1, d4mafb1, d4mafb3, d4mafc1, d4mafc3, d4mafd1, d4mafe1, d4mafe3, d4maff1, d4mafg1, d4mafg3, d4mafh1 automated match to d4mafa2 complexed with adx

39. Staphylococcus aureus [TaxId:1280] [189083] (1 PDB entry)

    • Domain for 3f3m:

      • Domain d3f3ma_: 3f3m A: [175444] automated match to d1o6ba_ complexed with pps

40. Staphylococcus aureus [TaxId:196620] [237670] (3 PDB entries)

    1. Domains for 4nah:

       1. Domain d4naha_: 4nah A: [253925] automated match to d4naua_ complexed with 2vj, ags

       2. Domain d4nahb_: 4nah B: [253926] automated match to d4naua_ complexed with 2vj, ags

       3. Domain d4nahc_: 4nah C: [253927] automated match to d4naua_ complexed with 2vj, ags

       4. Domain d4nahd_: 4nah D: [253928] automated match to d4naua_ complexed with 2vj, ags

       5. Domain d4nahe_: 4nah E: [253929] automated match to d4naua_ complexed with 2vj, ags

       6. Domain d4nahf_: 4nah F: [253930] automated match to d4naua_ complexed with 2vj, ags

    2. Domains for 4nat:

       1. Domain d4nata_: 4nat A: [253931] automated match to d4naua_ complexed with 2w5, adp, epe

       2. Domain d4natb_: 4nat B: [253932] automated match to d4naua_ complexed with 2w5, adp, epe

       3. Domain d4natc_: 4nat C: [253933] automated match to d4naua_ complexed with 2w5, adp, epe

    3. Domains for 4nau:

       1. Domain d4naua_: 4nau A: [237671] automated match to d4e1aa_ complexed with 2w3, ags

       2. Domain d4naub_: 4nau B: [240617] automated match to d4naua_ complexed with 2w3, ags

       3. Domain d4nauc_: 4nau C: [240618] automated match to d4naua_ complexed with 2w3, ags

41. Staphylococcus aureus [TaxId:282458] [189403] (1 PDB entry)

    • Domains for 2x3f:

      1. Domain d2x3fa_: 2x3f A: [169847] automated match to d1v8fa_ complexed with apc, so4

      2. Domain d2x3fb_: 2x3f B: [169848] automated match to d1v8fa_ complexed with apc, so4

42. Staphylococcus aureus [TaxId:93061] [189395] (2 PDB entries)

    1. Domains for 3ag5:

       1. Domain d3ag5a_: 3ag5 A: [172140] automated match to d1v8fa_

       2. Domain d3ag5b_: 3ag5 B: [172141] automated match to d1v8fa_

    2. Domains for 3ag6:

       1. Domain d3ag6a_: 3ag6 A: [172142] automated match to d1v8fa_ complexed with acy, paj, pg4

       2. Domain d3ag6b_: 3ag6 B: [172143] automated match to d1v8fa_ complexed with acy, paj, pg4

43. Streptomyces wedmorensis [TaxId:43759] [339018] (1 PDB entry)

    • Domain for 5x3d:

      • Domain d5x3da_: 5x3d A: [339019] automated match to d1coza_ complexed with 7xl

44. Synechococcus elongatus [TaxId:32046] [225113] (1 PDB entry)

    • Domains for 2cfo:

      1. Domain d2cfoa1: 2cfo A:2-311 [203784] Other proteins in same PDB: d2cfoa2, d2cfob2, d2cfob3 automated match to d1glna2 protein/RNA complex; complexed with glu

      2. Domain d2cfob1: 2cfo B:2-311 [230601] Other proteins in same PDB: d2cfoa2, d2cfob2, d2cfob3 automated match to d2cfoa1 protein/RNA complex; complexed with glu

45. Thermotoga maritima [TaxId:2336] [225198] (2 PDB entries)

    1. Domain for 2o5r:

       • Domain d2o5ra1: 2o5r A:1-312 [205227] Other proteins in same PDB: d2o5ra2 automated match to d1glna2 complexed with cl, gol

    2. Domain for 3afh:

       • Domain d3afha1: 3afh A:24-315 [231789] Other proteins in same PDB: d3afha2 automated match to d4gria1 protein/RNA complex; complexed with gsu

46. Toxoplasma gondii [TaxId:5811] [270313] (1 PDB entry)

    • Domain for 4p2b:

      • Domain d4p2ba1: 4p2b A:22-351 [270314] Other proteins in same PDB: d4p2ba2, d4p2ba3 automated match to d1qtqa2 complexed with so4

47. Trypanosoma brucei [TaxId:999953] [226467] (27 PDB entries)

    1. Domains for 3tun:

       1. Domain d3tuna1: 3tun A:238-606 [306600] Other proteins in same PDB: d3tuna2, d3tunb4, d3tunb5 automated match to d4eg8b1 protein/RNA complex; complexed with c13, dms, gol, met

       2. Domain d3tunb3: 3tun B:237-606 [306602] Other proteins in same PDB: d3tuna2, d3tunb4, d3tunb5 automated match to d4eg8b1 protein/RNA complex; complexed with c13, dms, gol, met

    2. Domains for 3u1e:

       1. Domain d3u1ea1: 3u1e A:238-606 [306607] Other proteins in same PDB: d3u1ea2, d3u1eb4, d3u1eb5 automated match to d4eg8b1 protein/RNA complex; complexed with 387, dms, gol, met

       2. Domain d3u1eb3: 3u1e B:237-606 [306609] Other proteins in same PDB: d3u1ea2, d3u1eb4, d3u1eb5 automated match to d4eg8b1 protein/RNA complex; complexed with 387, dms, gol, met

    3. Domains for 3u1f:

       1. Domain d3u1fa1: 3u1f A:238-606 [306612] Other proteins in same PDB: d3u1fa2, d3u1fb4, d3u1fb5 automated match to d4eg8b1 protein/RNA complex; complexed with 392, dms, gol, met

       2. Domain d3u1fb3: 3u1f B:237-606 [306614] Other proteins in same PDB: d3u1fa2, d3u1fb4, d3u1fb5 automated match to d4eg8b1 protein/RNA complex; complexed with 392, dms, gol, met

    4. Domains for 3u1g:

       1. Domain d3u1ga1: 3u1g A:239-606 [306617] Other proteins in same PDB: d3u1ga2, d3u1gb4, d3u1gb5 automated match to d4eg8b1 protein/RNA complex; complexed with 415, dms, gol, met, so4

       2. Domain d3u1gb3: 3u1g B:237-606 [306619] Other proteins in same PDB: d3u1ga2, d3u1gb4, d3u1gb5 automated match to d4eg8b1 protein/RNA complex; complexed with 415, dms, gol, met, so4

    5. Domains for 3u1z:

       1. Domain d3u1za1: 3u1z A:237-606 [306622] Other proteins in same PDB: d3u1za2, d3u1zb2, d3u1zb3 automated match to d4eg8b1 protein/RNA complex; complexed with 43e, dms, gol, met, so4

       2. Domain d3u1zb1: 3u1z B:237-606 [306624] Other proteins in same PDB: d3u1za2, d3u1zb2, d3u1zb3 automated match to d4eg8b1 protein/RNA complex; complexed with 43e, dms, gol, met, so4

    6. Domains for 3u20:

       1. Domain d3u20a1: 3u20 A:238-606 [306627] Other proteins in same PDB: d3u20a2, d3u20b2, d3u20b3 automated match to d4eg8b1 protein/RNA complex; complexed with 44f, dms, gol, met

       2. Domain d3u20b1: 3u20 B:237-606 [306629] Other proteins in same PDB: d3u20a2, d3u20b2, d3u20b3 automated match to d4eg8b1 protein/RNA complex; complexed with 44f, dms, gol, met

    7. Domains for 4eg1:

       1. Domain d4eg1a1: 4eg1 A:239-606 [262694] Other proteins in same PDB: d4eg1a2, d4eg1b2, d4eg1b3 automated match to d4mvyb2 protein/RNA complex; complexed with gol, met

       2. Domain d4eg1b1: 4eg1 B:237-606 [220470] Other proteins in same PDB: d4eg1a2, d4eg1b2, d4eg1b3 automated match to d1rqga2 protein/RNA complex; complexed with gol, met

    8. Domains for 4eg3:

       1. Domain d4eg3a1: 4eg3 A:239-606 [262696] Other proteins in same PDB: d4eg3a2, d4eg3b2, d4eg3b3 automated match to d4mvyb2 protein/RNA complex; complexed with gol, me8

       2. Domain d4eg3b1: 4eg3 B:237-606 [220488] Other proteins in same PDB: d4eg3a2, d4eg3b2, d4eg3b3 automated match to d1rqga2 protein/RNA complex; complexed with gol, me8

    9. Domains for 4eg4:

       1. Domain d4eg4a1: 4eg4 A:238-606 [266179] Other proteins in same PDB: d4eg4a2, d4eg4b2, d4eg4b3 automated match to d4eg8b1 protein/RNA complex; complexed with 0ot, dms, gol, met, so4

       2. Domain d4eg4b1: 4eg4 B:237-606 [266181] Other proteins in same PDB: d4eg4a2, d4eg4b2, d4eg4b3 automated match to d4eg8b1 protein/RNA complex; complexed with 0ot, dms, gol, met, so4

    10. Domains for 4eg5:

        1. Domain d4eg5a1: 4eg5 A:239-606 [266183] Other proteins in same PDB: d4eg5a2, d4eg5b2, d4eg5b3 automated match to d4eg8b1 protein/RNA complex; complexed with 0ou, dms, gol, met, so4

        2. Domain d4eg5b1: 4eg5 B:237-606 [266185] Other proteins in same PDB: d4eg5a2, d4eg5b2, d4eg5b3 automated match to d4eg8b1 protein/RNA complex; complexed with 0ou, dms, gol, met, so4

    11. Domains for 4eg6:

        1. Domain d4eg6a1: 4eg6 A:239-606 [262698] Other proteins in same PDB: d4eg6a2, d4eg6b2, d4eg6b3 automated match to d4mvyb2 protein/RNA complex; complexed with 0p5, dms, gol, met, so4

        2. Domain d4eg6b1: 4eg6 B:-1-606 [220490] Other proteins in same PDB: d4eg6a2, d4eg6b2, d4eg6b3 automated match to d1rqga2 protein/RNA complex; complexed with 0p5, dms, gol, met, so4

    12. Domains for 4eg7:

        1. Domain d4eg7a1: 4eg7 A:238-606 [266187] Other proteins in same PDB: d4eg7a2, d4eg7b2, d4eg7b3 automated match to d4mvyb2 protein/RNA complex; complexed with 0p4, dms, gol, met

        2. Domain d4eg7b1: 4eg7 B:237-606 [266189] Other proteins in same PDB: d4eg7a2, d4eg7b2, d4eg7b3 automated match to d4mvyb2 protein/RNA complex; complexed with 0p4, dms, gol, met

    13. Domains for 4eg8:

        1. Domain d4eg8a1: 4eg8 A:238-606 [262700] Other proteins in same PDB: d4eg8a2, d4eg8b2, d4eg8b3 automated match to d4mvyb2 protein/RNA complex; complexed with 0p6, dms, gol, met

        2. Domain d4eg8b1: 4eg8 B:237-606 [220492] Other proteins in same PDB: d4eg8a2, d4eg8b2, d4eg8b3 automated match to d1rqga2 protein/RNA complex; complexed with 0p6, dms, gol, met

    14. Domains for 4ega:

        1. Domain d4egaa1: 4ega A:238-606 [220494] Other proteins in same PDB: d4egaa2, d4egab2, d4egab3 automated match to d1rqga2 protein/RNA complex; complexed with 0p8, dms, gol, met, so4

        2. Domain d4egab1: 4ega B:237-606 [220496] Other proteins in same PDB: d4egaa2, d4egab2, d4egab3 automated match to d1rqga2 protein/RNA complex; complexed with 0p8, dms, gol, met, so4

    15. Domain for 4mvw:

        • Domain d4mvwb1: 4mvw B:237-606 [257111] Other proteins in same PDB: d4mvwa2, d4mvwb2, d4mvwb3 automated match to d4eg8b1 protein/RNA complex; complexed with 43e, dms, gol, met, so4

    16. Domains for 4zt2:

        1. Domain d4zt2a1: 4zt2 A:238-606 [317101] Other proteins in same PDB: d4zt2a2, d4zt2b2, d4zt2b3 automated match to d4eg8b1 protein/RNA complex; complexed with 4rp, dms, gol, met, so4

        2. Domain d4zt2b1: 4zt2 B:237-606 [317113] Other proteins in same PDB: d4zt2a2, d4zt2b2, d4zt2b3 automated match to d4eg8b1 protein/RNA complex; complexed with 4rp, dms, gol, met, so4

    17. Domains for 4zt3:

        1. Domain d4zt3a1: 4zt3 A:238-606 [317111] Other proteins in same PDB: d4zt3a2, d4zt3b2, d4zt3b3 automated match to d4eg8b1 protein/RNA complex; complexed with 4rq, dms, gol, met, so4

        2. Domain d4zt3b1: 4zt3 B:-1-606 [317098] Other proteins in same PDB: d4zt3a2, d4zt3b2, d4zt3b3 automated match to d4eg8b1 protein/RNA complex; complexed with 4rq, dms, gol, met, so4

    18. Domains for 4zt4:

        1. Domain d4zt4a1: 4zt4 A:238-606 [317108] Other proteins in same PDB: d4zt4a2, d4zt4b2, d4zt4b3 automated match to d4eg8b1 protein/RNA complex; complexed with 4ro, dms, gol, met, so4

        2. Domain d4zt4b1: 4zt4 B:-1-606 [317169] Other proteins in same PDB: d4zt4a2, d4zt4b2, d4zt4b3 automated match to d4eg8b1 protein/RNA complex; complexed with 4ro, dms, gol, met, so4

    19. Domains for 4zt5:

        1. Domain d4zt5a1: 4zt5 A:238-606 [317063] Other proteins in same PDB: d4zt5a2, d4zt5b2, d4zt5b3 automated match to d4eg8b1 protein/RNA complex; complexed with 4rn, dms, gol, met, so4

        2. Domain d4zt5b1: 4zt5 B:237-606 [317116] Other proteins in same PDB: d4zt5a2, d4zt5b2, d4zt5b3 automated match to d4eg8b1 protein/RNA complex; complexed with 4rn, dms, gol, met, so4

    20. Domains for 4zt6:

        1. Domain d4zt6a1: 4zt6 A:238-606 [317074] Other proteins in same PDB: d4zt6a2, d4zt6b2, d4zt6b3 automated match to d4eg8b1 protein/RNA complex; complexed with 4rd, dms, met

        2. Domain d4zt6b1: 4zt6 B:237-606 [317159] Other proteins in same PDB: d4zt6a2, d4zt6b2, d4zt6b3 automated match to d4eg8b1 protein/RNA complex; complexed with 4rd, dms, met

    21. Domains for 4zt7:

        1. Domain d4zt7a1: 4zt7 A:238-606 [317162] Other proteins in same PDB: d4zt7a2, d4zt7b2, d4zt7b3 automated match to d4eg8b1 protein/RNA complex; complexed with 4rc, dms, gol, met

        2. Domain d4zt7b1: 4zt7 B:-1-606 [317151] Other proteins in same PDB: d4zt7a2, d4zt7b2, d4zt7b3 automated match to d4eg8b1 protein/RNA complex; complexed with 4rc, dms, gol, met

    22. Domains for 5j58:

        1. Domain d5j58a1: 5j58 A:238-606 [328962] Other proteins in same PDB: d5j58a2, d5j58b2, d5j58b3 automated match to d4eg8b1 protein/RNA complex; complexed with dms, gol, met, n56

        2. Domain d5j58b1: 5j58 B:237-606 [328905] Other proteins in same PDB: d5j58a2, d5j58b2, d5j58b3 automated match to d4eg8b1 protein/RNA complex; complexed with dms, gol, met, n56

    23. Domains for 5j59:

        1. Domain d5j59a1: 5j59 A:238-606 [328951] Other proteins in same PDB: d5j59a2, d5j59b2, d5j59b3 automated match to d4eg8b1 protein/RNA complex; complexed with gol, met, n93

        2. Domain d5j59b1: 5j59 B:237-606 [329135] Other proteins in same PDB: d5j59a2, d5j59b2, d5j59b3 automated match to d4eg8b1 protein/RNA complex; complexed with gol, met, n93

    24. Domains for 5j5a:

        1. Domain d5j5aa1: 5j5a A:238-606 [329143] Other proteins in same PDB: d5j5aa2, d5j5ab2, d5j5ab3 automated match to d4eg8b1 protein/RNA complex; complexed with 756, met

        2. Domain d5j5ab1: 5j5a B:237-606 [328927] Other proteins in same PDB: d5j5aa2, d5j5ab2, d5j5ab3 automated match to d4eg8b1 protein/RNA complex; complexed with 756, met

    25. Domains for 5nfh:

        1. Domain d5nfha1: 5nfh A:238-606 [340501] Other proteins in same PDB: d5nfha2, d5nfhb2, d5nfhb3 automated match to d4eg8b1 protein/RNA complex; complexed with 8w2, dms, gol, met

        2. Domain d5nfhb1: 5nfh B:237-606 [340474] Other proteins in same PDB: d5nfha2, d5nfhb2, d5nfhb3 automated match to d4eg8b1 protein/RNA complex; complexed with 8w2, dms, gol, met

    26. Domains for 5tqu:

        1. Domain d5tqua1: 5tqu A:238-606 [333032] Other proteins in same PDB: d5tqua2, d5tqub2, d5tqub3 automated match to d4eg8b1 protein/RNA complex; complexed with gol, i53, met, so4

        2. Domain d5tqub1: 5tqu B:237-606 [333015] Other proteins in same PDB: d5tqua2, d5tqub2, d5tqub3 automated match to d4eg8b1 protein/RNA complex; complexed with gol, i53, met, so4

    27. Domains for 5v49:

        1. Domain d5v49a1: 5v49 A:238-606 [337082] Other proteins in same PDB: d5v49a2, d5v49b2, d5v49b3 automated match to d4eg8b1 protein/RNA complex; complexed with 8wa, gol, met

        2. Domain d5v49b1: 5v49 B:237-606 [337079] Other proteins in same PDB: d5v49a2, d5v49b2, d5v49b3 automated match to d4eg8b1 protein/RNA complex; complexed with 8wa, gol, met

48. Trypanosome (Trypanosoma brucei) [TaxId:5691] [188998] (16 PDB entries)

    1. Domains for 3i05:

       1. Domain d3i05a_: 3i05 A: [177992] automated match to d1ulhb_

       2. Domain d3i05b_: 3i05 B: [177993] automated match to d1ulhb_

    2. Domain for 4mvw:

       • Domain d4mvwa1: 4mvw A:237-606 [263058] Other proteins in same PDB: d4mvwa2, d4mvwb2, d4mvwb3 automated match to d4mvyb2 protein/RNA complex; complexed with 43e, dms, gol, met, so4

    3. Domains for 4mvx:

       1. Domain d4mvxa1: 4mvx A:238-606 [266781] Other proteins in same PDB: d4mvxa2, d4mvxb1, d4mvxb3 automated match to d4mvyb2 protein/RNA complex; complexed with c13, dms, gol, met

       2. Domain d4mvxb2: 4mvx B:237-606 [266784] Other proteins in same PDB: d4mvxa2, d4mvxb1, d4mvxb3 automated match to d1rqga2 protein/RNA complex; complexed with c13, dms, gol, met

    4. Domains for 4mvy:

       1. Domain d4mvya1: 4mvy A:238-606 [266785] Other proteins in same PDB: d4mvya2, d4mvyb1, d4mvyb3 automated match to d4mvyb2 protein/RNA complex; complexed with 387, dms, gol, met

       2. Domain d4mvyb2: 4mvy B:237-606 [266788] Other proteins in same PDB: d4mvya2, d4mvyb1, d4mvyb3 automated match to d1rqga2 protein/RNA complex; complexed with 387, dms, gol, met

    5. Domains for 4mw0:

       1. Domain d4mw0a1: 4mw0 A:238-606 [266789] Other proteins in same PDB: d4mw0a2, d4mw0b1, d4mw0b3 automated match to d4mvyb2 protein/RNA complex; complexed with 392, dms, gol, met

       2. Domain d4mw0b2: 4mw0 B:237-373,B:387-606 [266792] Other proteins in same PDB: d4mw0a2, d4mw0b1, d4mw0b3 automated match to d3tunb1 protein/RNA complex; complexed with 392, dms, gol, met

    6. Domains for 4mw1:

       1. Domain d4mw1a1: 4mw1 A:238-606 [266793] Other proteins in same PDB: d4mw1a2, d4mw1b2, d4mw1b3 automated match to d4mvyb2 protein/RNA complex; complexed with 44f, dms, gol, met

       2. Domain d4mw1b1: 4mw1 B:237-606 [266795] Other proteins in same PDB: d4mw1a2, d4mw1b2, d4mw1b3 automated match to d4mvyb2 protein/RNA complex; complexed with 44f, dms, gol, met

    7. Domains for 4mw2:

       1. Domain d4mw2a1: 4mw2 A:238-606 [266797] Other proteins in same PDB: d4mw2a2, d4mw2b2, d4mw2b3 automated match to d4mvyb2 protein/RNA complex; complexed with 2e9, dms, gol, met, so4

       2. Domain d4mw2b1: 4mw2 B:237-606 [266799] Other proteins in same PDB: d4mw2a2, d4mw2b2, d4mw2b3 automated match to d4mvyb2 protein/RNA complex; complexed with 2e9, dms, gol, met, so4

    8. Domains for 4mw4:

       1. Domain d4mw4a1: 4mw4 A:238-606 [266801] Other proteins in same PDB: d4mw4a2, d4mw4b2, d4mw4b3 automated match to d4mvyb2 protein/RNA complex; complexed with 2eb, dms, gol, met, so4

       2. Domain d4mw4b1: 4mw4 B:237-606 [266803] Other proteins in same PDB: d4mw4a2, d4mw4b2, d4mw4b3 automated match to d4mvyb2 protein/RNA complex; complexed with 2eb, dms, gol, met, so4

    9. Domains for 4mw5:

       1. Domain d4mw5a1: 4mw5 A:239-606 [266805] Other proteins in same PDB: d4mw5a2, d4mw5b1, d4mw5b3 automated match to d4mvyb2 protein/RNA complex; complexed with 415, dms, gol, met, so4

       2. Domain d4mw5b2: 4mw5 B:237-606 [266808] Other proteins in same PDB: d4mw5a2, d4mw5b1, d4mw5b3 automated match to d1rqga2 protein/RNA complex; complexed with 415, dms, gol, met, so4

    10. Domains for 4mw6:

        1. Domain d4mw6a1: 4mw6 A:238-606 [266809] Other proteins in same PDB: d4mw6a2, d4mw6b2, d4mw6b3 automated match to d4mvyb2 protein/RNA complex; complexed with 2ee, dms, gol, met

        2. Domain d4mw6b1: 4mw6 B:237-606 [266811] Other proteins in same PDB: d4mw6a2, d4mw6b2, d4mw6b3 automated match to d4mvyb2 protein/RNA complex; complexed with 2ee, dms, gol, met

    11. Domains for 4mw7:

        1. Domain d4mw7a1: 4mw7 A:239-606 [266813] Other proteins in same PDB: d4mw7a2, d4mw7b2, d4mw7b3 automated match to d4mvyb2 protein/RNA complex; complexed with 2ef, dms, gol, met, so4

        2. Domain d4mw7b1: 4mw7 B:237-606 [266815] Other proteins in same PDB: d4mw7a2, d4mw7b2, d4mw7b3 automated match to d4mvyb2 protein/RNA complex; complexed with 2ef, dms, gol, met, so4

    12. Domains for 4mw9:

        1. Domain d4mw9a1: 4mw9 A:238-606 [266817] Other proteins in same PDB: d4mw9a2, d4mw9b2, d4mw9b3 automated match to d4mvyb2 protein/RNA complex; complexed with 2ej, dms, gol, met, so4

        2. Domain d4mw9b1: 4mw9 B:237-606 [266819] Other proteins in same PDB: d4mw9a2, d4mw9b2, d4mw9b3 automated match to d4mvyb2 protein/RNA complex; complexed with 2ej, dms, gol, met, so4

    13. Domains for 4mwb:

        1. Domain d4mwba1: 4mwb A:238-606 [266821] Other proteins in same PDB: d4mwba2, d4mwbb2, d4mwbb3 automated match to d4mvyb2 protein/RNA complex; complexed with 2ek, dms, gol, met, so4

        2. Domain d4mwbb1: 4mwb B:237-606 [266823] Other proteins in same PDB: d4mwba2, d4mwbb2, d4mwbb3 automated match to d4mvyb2 protein/RNA complex; complexed with 2ek, dms, gol, met, so4

    14. Domains for 4mwc:

        1. Domain d4mwca1: 4mwc A:238-606 [266825] Other proteins in same PDB: d4mwca2, d4mwcb2, d4mwcb3 automated match to d4mvyb2 protein/RNA complex; complexed with 2em, dms, gol, met, so4

        2. Domain d4mwcb1: 4mwc B:237-606 [266827] Other proteins in same PDB: d4mwca2, d4mwcb2, d4mwcb3 automated match to d4mvyb2 protein/RNA complex; complexed with 2em, dms, gol, met, so4

    15. Domains for 4mwd:

        1. Domain d4mwda1: 4mwd A:238-606 [266829] Other proteins in same PDB: d4mwda2, d4mwdb2, d4mwdb3 automated match to d4mvyb2 protein/RNA complex; complexed with 43e, acp, dms, gol, met, so4

        2. Domain d4mwdb1: 4mwd B:237-606 [266831] Other proteins in same PDB: d4mwda2, d4mwdb2, d4mwdb3 automated match to d4mvyb2 protein/RNA complex; complexed with 43e, acp, dms, gol, met, so4

    16. Domains for 4mwe:

        1. Domain d4mwea1: 4mwe A:237-606 [266833] Other proteins in same PDB: d4mwea2, d4mweb2, d4mweb3 automated match to d4mvyb2 protein/RNA complex; complexed with 2en, dms, gol, met, so4

        2. Domain d4mweb1: 4mwe B:237-606 [266835] Other proteins in same PDB: d4mwea2, d4mweb2, d4mweb3 automated match to d4mvyb2 protein/RNA complex; complexed with 2en, dms, gol, met, so4

49. Vibrio parahaemolyticus [TaxId:670] [196584] (1 PDB entry)

    • Domains for 3h05:

      1. Domain d3h05a_: 3h05 A: [199482] automated match to d3h05b_ complexed with cl

      2. Domain d3h05b_: 3h05 B: [196585] automated match to d2h29a_ complexed with cl

50. Xanthomonas oryzae [TaxId:291331] [339991] (1 PDB entry)

    • Domains for 5h4v:

      1. Domain d5h4va1: 5h4v A:2-298 [339992] Other proteins in same PDB: d5h4va2, d5h4vb2, d5h4vc2, d5h4vd2, d5h4ve2, d5h4vf2 automated match to d4g6za1

      2. Domain d5h4vb1: 5h4v B:2-298 [340249] Other proteins in same PDB: d5h4va2, d5h4vb2, d5h4vc2, d5h4vd2, d5h4ve2, d5h4vf2 automated match to d4g6za1

      3. Domain d5h4vc1: 5h4v C:2-298 [339997] Other proteins in same PDB: d5h4va2, d5h4vb2, d5h4vc2, d5h4vd2, d5h4ve2, d5h4vf2 automated match to d4g6za1

      4. Domain d5h4vd1: 5h4v D:2-298 [340001] Other proteins in same PDB: d5h4va2, d5h4vb2, d5h4vc2, d5h4vd2, d5h4ve2, d5h4vf2 automated match to d4g6za1

      5. Domain d5h4ve1: 5h4v E:2-298 [340022] Other proteins in same PDB: d5h4va2, d5h4vb2, d5h4vc2, d5h4vd2, d5h4ve2, d5h4vf2 automated match to d4g6za1

      6. Domain d5h4vf1: 5h4v F:2-298 [340148] Other proteins in same PDB: d5h4va2, d5h4vb2, d5h4vc2, d5h4vd2, d5h4ve2, d5h4vf2 automated match to d4g6za1

More info for Protein automated matches from c.26.1.0: automated matches

Timeline for Protein automated matches from c.26.1.0: automated matches:

• Protein automated matches from c.26.1.0: automated matches first appeared in SCOPe 2.01
  
• Protein automated matches from c.26.1.0: automated matches appears in SCOPe 2.05
  
• Protein automated matches from c.26.1.0: automated matches appears in SCOPe 2.07
  
• Protein automated matches from c.26.1.0: automated matches appears in the current release, SCOPe 2.08