Lineage for Protein: automated matches

  1. Root: SCOPe 2.03
  2. 1287432Class b: All beta proteins [48724] (174 folds)
  3. 1287433Fold b.1: Immunoglobulin-like beta-sandwich [48725] (28 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 1298299Superfamily b.1.6: Cadherin-like [49313] (3 families) (S)
  5. 1298382Family b.1.6.0: automated matches [191376] (1 protein)
    not a true family
  6. 1298383Protein automated matches [190458] (3 species)
    not a true protein

Species:

  1. 1298384African clawed frog (Xenopus laevis) [TaxId:8355] [225845] (1 PDB entry)
  2. 1298386Chicken (Gallus gallus) [TaxId:9031] [196808] (4 PDB entries)
    1. Domains for 1zvn:
      1. 1298388Domain d1zvna_: 1zvn A: [196810]
        automated match to d2a4ca_
      2. 1298389Domain d1zvnb_: 1zvn B: [196809]
        automated match to d2a4ca_
    2. Domains for 3k5s:
      1. 1298394Domain d3k5sa1: 3k5s A:1-100 [212178]
        automated match to d1ncja1
        complexed with ca
      2. 1298395Domain d3k5sa2: 3k5s A:101-217 [212179]
        automated match to d1ncja2
        complexed with ca
      3. 1298396Domain d3k5sb1: 3k5s B:1-100 [212180]
        automated match to d1ncja1
        complexed with ca
      4. 1298397Domain d3k5sb2: 3k5s B:101-217 [212181]
        automated match to d1ncja2
        complexed with ca
    3. Domain for 3k6i:
    4. Domains for 3ppe:
      1. 1298390Domain d3ppea1: 3ppe A:1-97 [233261]
        automated match to d3lndd1
        complexed with ca
      2. 1298391Domain d3ppea2: 3ppe A:98-203 [233262]
        automated match to d3lnda2
        complexed with ca
      3. 1298392Domain d3ppeb1: 3ppe B:1-97 [233263]
        automated match to d3lndd1
        complexed with ca
      4. 1298393Domain d3ppeb2: 3ppe B:98-203 [233264]
        automated match to d3lnda2
        complexed with ca
  3. 1298398Mouse (Mus musculus) [TaxId:10090] [187373] (6 PDB entries)
    1. Domains for 1zxk:
      1. 1298405Domain d1zxka_: 1zxk A: [197710]
        automated match to d1zxkb_
      2. 1298406Domain d1zxkb_: 1zxk B: [193822]
        automated match to d2a4ca_
    2. Domains for 2a4c:
      1. 1298409Domain d2a4ca_: 2a4c A: [162672]
        automated match to d1o6sb_
      2. 1298410Domain d2a4cb_: 2a4c B: [162673]
        automated match to d1o6sb_
    3. Domains for 2qvf:
      1. 1298407Domain d2qvfb1: 2qvf B:1-101 [205892]
        automated match to d1ncja1
        complexed with ca
      2. 1298408Domain d2qvfb2: 2qvf B:102-213 [205893]
        automated match to d1ncja2
        complexed with ca
    4. Domains for 3k5r:
      1. 1298401Domain d3k5ra1: 3k5r A:0-100 [212174]
        automated match to d1ncja1
      2. 1298402Domain d3k5ra2: 3k5r A:101-217 [212175]
        automated match to d1ncja2
      3. 1298403Domain d3k5rb1: 3k5r B:0-100 [212176]
        automated match to d1ncja1
      4. 1298404Domain d3k5rb2: 3k5r B:101-217 [212177]
        automated match to d1ncja2
    5. Domains for 3k6f:
      1. 1298399Domain d3k6fa_: 3k6f A: [212183]
        automated match to d1ncia_
      2. 1298400Domain d3k6fb_: 3k6f B: [212184]
        automated match to d1ncia_
    6. Domains for 3lnd:
      1. 1298411Domain d3lnda1: 3lnd A:5-99 [212950]
        automated match to d1ncja1
        complexed with ca
      2. 1298412Domain d3lnda2: 3lnd A:100-207 [212951]
        automated match to d1ncja2
        complexed with ca
      3. 1298413Domain d3lndb1: 3lnd B:1-99 [212952]
        automated match to d1ncja1
        complexed with ca
      4. 1298414Domain d3lndb2: 3lnd B:100-207 [212953]
        automated match to d1ncja2
        complexed with ca
      5. 1298415Domain d3lndc1: 3lnd C:4-99 [212954]
        automated match to d1ncja1
        complexed with ca
      6. 1298416Domain d3lndc2: 3lnd C:100-207 [212955]
        automated match to d1ncja2
        complexed with ca
      7. 1298417Domain d3lndd1: 3lnd D:1-99 [212956]
        automated match to d1ncja1
        complexed with ca
      8. 1298418Domain d3lndd2: 3lnd D:100-207 [212957]
        automated match to d1ncja2
        complexed with ca

More info for Protein automated matches from b.1.6.0: automated matches

Timeline for Protein automated matches from b.1.6.0: automated matches: