Class a: All alpha proteins [46456] (286 folds) |
Fold a.3: Cytochrome c [46625] (1 superfamily) core: 3 helices; folded leaf, opened |
Superfamily a.3.1: Cytochrome c [46626] (9 families) covalently-bound heme completes the core |
Family a.3.1.0: automated matches [191374] (1 protein) not a true family |
Protein automated matches [190453] (18 species) not a true protein |
Achromobacter xylosoxidans [TaxId:85698] [188921] (1 PDB entry) |
Aquifex aeolicus [TaxId:224324] [268117] (1 PDB entry) |
Domain d3x15a_: 3x15 A: [268119] automated match to d2zxya_ complexed with hec |
Domain d3x15d_: 3x15 D: [268121] automated match to d2zxya_ complexed with hec |
Domain d3x15g_: 3x15 G: [268123] automated match to d2zxya_ complexed with hec |
Domain d3x15j_: 3x15 J: [268122] automated match to d2zxya_ complexed with hec |
Aquifex aeolicus [TaxId:63363] [189042] (1 PDB entry) |
Domain d2zxya_: 2zxy A: [171602] automated match to d1cora_ complexed with hec |
Chlorobium tepidum [TaxId:194439] [228039] (1 PDB entry) |
Domain d4j20a_: 4j20 A: [228040] automated match to d2v08a_ complexed with heb, ipa, na, so4 |
Domain d4j20b_: 4j20 B: [228041] automated match to d2v08a_ complexed with heb, ipa, na, so4 |
Geobacter sulfurreducens [TaxId:243231] [226497] (4 PDB entries) |
Domain d4aala1: 4aal A:23-188 [218750] automated match to d1nmla1 complexed with act, ca, eoh, hec, po4 |
Domain d4aala2: 4aal A:189-346 [218751] automated match to d1nmla2 complexed with act, ca, eoh, hec, po4 |
Domain d4aalb1: 4aal B:23-188 [218752] automated match to d1nmla1 complexed with act, ca, eoh, hec, po4 |
Domain d4aalb2: 4aal B:189-346 [218753] automated match to d1nmla2 complexed with act, ca, eoh, hec, po4 |
Domain d4aama1: 4aam A:23-188 [218754] automated match to d1nmla1 complexed with ca, hec, so4 |
Domain d4aama2: 4aam A:189-346 [218755] automated match to d1nmla2 complexed with ca, hec, so4 |
Domain d4aana1: 4aan A:24-188 [218756] automated match to d1nmla1 complexed with bu3, ca, hec |
Domain d4aana2: 4aan A:189-346 [218757] automated match to d1nmla2 complexed with bu3, ca, hec |
Domain d4aaoa1: 4aao A:23-188 [218758] automated match to d1nmla1 complexed with ca, hec, so4 |
Domain d4aaoa2: 4aao A:189-346 [218759] automated match to d1nmla2 complexed with ca, hec, so4 |
Domain d4aaob1: 4aao B:23-188 [218760] automated match to d1nmla1 complexed with ca, hec, so4 |
Domain d4aaob2: 4aao B:189-345 [218761] automated match to d1nmla2 complexed with ca, hec, so4 |
Geobacter sulfurreducens [TaxId:35554] [188580] (6 PDB entries) |
Domain d3cu4a_: 3cu4 A: [173463] automated match to d1gdva_ complexed with hem |
Domain d3dp5a_: 3dp5 A: [174142] automated match to d1gdva_ complexed with hem, so4 |
Domain d3hq6a1: 3hq6 A:22-188 [211210] automated match to d1nmla1 complexed with ca, hem |
Domain d3hq6a2: 3hq6 A:189-345 [211211] automated match to d1nmla2 complexed with ca, hem |
Domain d3hq6b1: 3hq6 B:22-188 [211212] automated match to d1nmla1 complexed with ca, hem |
Domain d3hq6b2: 3hq6 B:189-345 [211213] automated match to d1nmla2 complexed with ca, hem |
Domain d3hq7a1: 3hq7 A:20-188 [211214] automated match to d1nmla1 complexed with ca, hem |
Domain d3hq7a2: 3hq7 A:189-345 [211215] automated match to d1nmla2 complexed with ca, hem |
Domain d3hq8a1: 3hq8 A:22-188 [211216] automated match to d1nmla1 complexed with ca, hem, imd |
Domain d3hq8a2: 3hq8 A:189-345 [211217] automated match to d1nmla2 complexed with ca, hem, imd |
Domain d3hq8b1: 3hq8 B:22-188 [211218] automated match to d1nmla1 complexed with ca, hem, imd |
Domain d3hq8b2: 3hq8 B:189-345 [211219] automated match to d1nmla2 complexed with ca, hem, imd |
Domain d3hq9a1: 3hq9 A:22-188 [211220] automated match to d1nmla1 complexed with bu3, ca, hem, imd, oxl |
Domain d3hq9a2: 3hq9 A:189-345 [211221] automated match to d1nmla2 complexed with bu3, ca, hem, imd, oxl |
Domain d3hq9b1: 3hq9 B:21-188 [211222] automated match to d1nmla1 complexed with bu3, ca, hem, imd, oxl |
Domain d3hq9b2: 3hq9 B:189-345 [211223] automated match to d1nmla2 complexed with bu3, ca, hem, imd, oxl |
Hydrogenophilus thermoluteolus [TaxId:297] [187588] (1 PDB entry) |
Domain d2d0sa_: 2d0s A: [163536] automated match to d1dvva_ complexed with hec |
Hyphomicrobium denitrificans [TaxId:53399] [187593] (1 PDB entry) |
Domain d2d0wa_: 2d0w A: [163543] automated match to d2c8sa1 complexed with hem, zn |
Domain d2d0wb_: 2d0w B: [163544] automated match to d2c8sa1 complexed with hem, zn |
Nitrosomonas europaea [TaxId:915] [224844] (2 PDB entries) |
Domain d3zoxa_: 3zox A: [218383] automated match to d1ynrb_ complexed with hec; mutant |
Domain d3zoxb_: 3zox B: [218384] automated match to d1ynrb_ complexed with hec; mutant |
Domain d3zoxc_: 3zox C: [218385] automated match to d1ynrb_ complexed with hec; mutant |
Domain d3zoxd_: 3zox D: [218386] automated match to d1ynrb_ complexed with hec; mutant |
Domain d3zoya_: 3zoy A: [218387] automated match to d1ynrb_ complexed with hec; mutant |
Domain d3zoyb_: 3zoy B: [218388] automated match to d1ynrb_ complexed with hec; mutant |
Domain d3zoyc_: 3zoy C: [218389] automated match to d1ynrb_ complexed with hec; mutant |
Domain d3zoyd_: 3zoy D: [218390] automated match to d1ynrb_ complexed with hec; mutant |
Paracoccus denitrificans [TaxId:266] [225029] (1 PDB entry) |
Domain d2c1da1: 2c1d A:27-179 [197825] automated match to d1h32a1 complexed with hec, zn |
Domain d2c1da2: 2c1d A:180-290 [197826] automated match to d1h32a2 complexed with hec, zn |
Domain d2c1dc1: 2c1d C:27-179 [197827] automated match to d1h32a1 complexed with hec, zn |
Domain d2c1dc2: 2c1d C:180-290 [197828] automated match to d1h32a2 complexed with hec, zn |
Domain d2c1de1: 2c1d E:27-179 [197829] automated match to d1h32a1 complexed with hec, zn |
Domain d2c1de2: 2c1d E:180-290 [197830] automated match to d1h32a2 complexed with hec, zn |
Domain d2c1dg1: 2c1d G:27-179 [197831] automated match to d1h32a1 complexed with hec, zn |
Domain d2c1dg2: 2c1d G:180-290 [197832] automated match to d1h32a2 complexed with hec, zn |
Paracoccus pantotrophus [TaxId:82367] [187503] (3 PDB entries) |
Domain d2c1db_: 2c1d B: [163223] automated match to d1h31b_ complexed with hec, zn |
Domain d2c1dd_: 2c1d D: [163224] automated match to d1h31b_ complexed with hec, zn |
Domain d2c1df_: 2c1d F: [163225] automated match to d1h31b_ complexed with hec, zn |
Domain d2c1dh_: 2c1d H: [163226] automated match to d1h31b_ complexed with hec, zn |
Domain d2c1ua1: 2c1u A:4-180 [203691] automated match to d1nmla1 complexed with ca, hec |
Domain d2c1ua2: 2c1u A:181-338 [203692] automated match to d1nmla2 complexed with ca, hec |
Domain d2c1ub1: 2c1u B:4-180 [203693] automated match to d1nmla1 complexed with ca, hec |
Domain d2c1ub2: 2c1u B:181-338 [203694] automated match to d1nmla2 complexed with ca, hec |
Domain d2c1uc1: 2c1u C:4-180 [203695] automated match to d1nmla1 complexed with ca, hec |
Domain d2c1uc2: 2c1u C:181-338 [203696] automated match to d1nmla2 complexed with ca, hec |
Domain d2c1ud1: 2c1u D:4-180 [203697] automated match to d1nmla1 complexed with ca, hec |
Domain d2c1ud2: 2c1u D:181-338 [203698] automated match to d1nmla2 complexed with ca, hec |
Domain d2c1va1: 2c1v A:4-180 [203699] automated match to d1nmla1 complexed with ca, edo, hec |
Domain d2c1va2: 2c1v A:181-338 [203700] automated match to d1nmla2 complexed with ca, edo, hec |
Domain d2c1vb1: 2c1v B:4-180 [203701] automated match to d1nmla1 complexed with ca, edo, hec |
Domain d2c1vb2: 2c1v B:181-338 [203702] automated match to d1nmla2 complexed with ca, edo, hec |
Rhodobacter capsulatus [TaxId:1061] [225039] (1 PDB entry) |
Domain d1zzha1: 1zzh A:4-169 [203372] automated match to d1nmla1 complexed with ca, hec, zn |
Domain d1zzha2: 1zzh A:170-326 [203373] automated match to d1nmla2 complexed with ca, hec, zn |
Domain d1zzhb1: 1zzh B:4-169 [203374] automated match to d1nmla1 complexed with ca, hec, zn |
Domain d1zzhb2: 1zzh B:170-326 [203375] automated match to d1nmla2 complexed with ca, hec, zn |
Domain d1zzhc1: 1zzh C:4-169 [203376] automated match to d1nmla1 complexed with ca, hec, zn |
Domain d1zzhc2: 1zzh C:170-326 [203377] automated match to d1nmla2 complexed with ca, hec, zn |
Domain d1zzhd1: 1zzh D:4-169 [203378] automated match to d1nmla1 complexed with ca, hec, zn |
Domain d1zzhd2: 1zzh D:170-326 [203379] automated match to d1nmla2 complexed with ca, hec, zn |
Rhodothermus marinus [TaxId:29549] [193856] (1 PDB entry) |
Domain d1w2la_: 1w2l A: [193857] automated match to d1cora_ complexed with act, hem, trs |
Shewanella oneidensis [TaxId:70863] [226180] (1 PDB entry) |
Domain d3o5ca1: 3o5c A:24-171 [214172] automated match to d1iqca1 complexed with bu3, ca, hem |
Domain d3o5ca2: 3o5c A:172-331 [214173] automated match to d1iqca2 complexed with bu3, ca, hem |
Domain d3o5cb1: 3o5c B:24-171 [214174] automated match to d1iqca1 complexed with bu3, ca, hem |
Domain d3o5cb2: 3o5c B:172-330 [214175] automated match to d1iqca2 complexed with bu3, ca, hem |
Domain d3o5cc1: 3o5c C:24-171 [214176] automated match to d1iqca1 complexed with bu3, ca, hem |
Domain d3o5cc2: 3o5c C:172-328 [214177] automated match to d1iqca2 complexed with bu3, ca, hem |
Domain d3o5cd1: 3o5c D:24-171 [214178] automated match to d1iqca1 complexed with bu3, ca, hem |
Domain d3o5cd2: 3o5c D:172-330 [214179] automated match to d1iqca2 complexed with bu3, ca, hem |
Sideroxydans lithotrophicus [TaxId:580332] [271583] (1 PDB entry) |
Domain d4xxla_: 4xxl A: [271584] automated match to d4jcga_ complexed with hem |
Synechococcus sp. [TaxId:32049] [196764] (2 PDB entries) |
Domain d4eiea_: 4eie A: [196766] automated match to d3ph2b_ complexed with cl, hem, na |
Domain d4eifa_: 4eif A: [196765] automated match to d2v08a_ complexed with cl, hem, na; mutant |
Synechococcus sp. [TaxId:84588] [237969] (1 PDB entry) |
Domain d4kmga_: 4kmg A: [237970] automated match to d1ls9a_ complexed with hem, na |
Thale cress (Arabidopsis thaliana) [TaxId:3702] [187367] (4 PDB entries) |
Domain d2ce0a_: 2ce0 A: [163376] automated match to d1c6sa_ complexed with hec |
Domain d2ce1a_: 2ce1 A: [163377] automated match to d1c6sa_ complexed with hec |
Domain d2dgea_: 2dge A: [163627] automated match to d1c6sa_ complexed with hem, zn |
Domain d2dgeb_: 2dge B: [163628] automated match to d1c6sa_ complexed with hem, zn |
Domain d2dgec_: 2dge C: [163629] automated match to d1c6sa_ complexed with hem, zn |
Domain d2dged_: 2dge D: [163630] automated match to d1c6sa_ complexed with hem, zn |
Domain d2v07a_: 2v07 A: [168270] automated match to d1c6sa_ complexed with hem |
Timeline for Protein automated matches from a.3.1.0: automated matches: