SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2148571Fold c.108: HAD-like [56783] (1 superfamily)
    3 layers: a/b/a; parallel beta-sheet of 6 strands, order 321456
  4. 2148572Superfamily c.108.1: HAD-like [56784] (26 families) (S)
    usually contains an insertion (sub)domain after strand 1
  5. 2149297Family c.108.1.0: automated matches [191369] (1 protein)
    not a true family
  6. 2149298Protein automated matches [190447] (51 species)
    not a true protein

Species:

  1. 2149299Aquifex aeolicus [TaxId:224324] [188261] (2 PDB entries)
    1. Domains for 2p9j:
      1. 2149300Domain d2p9ja_: 2p9j A: [231138]
        automated match to d4hgnb_
      2. 2149301Domain d2p9jb_: 2p9j B: [231141]
        automated match to d4hgnb_
      3. 2149302Domain d2p9jc_: 2p9j C: [231140]
        automated match to d4hgnb_
      4. 2149303Domain d2p9jd_: 2p9j D: [231139]
        automated match to d4hgnb_
      5. 2149304Domain d2p9je_: 2p9j E: [231142]
        automated match to d4hgnb_
      6. 2149305Domain d2p9jf_: 2p9j F: [231143]
        automated match to d4hgnb_
      7. 2149306Domain d2p9jg_: 2p9j G: [238794]
        automated match to d2p9ja_
      8. 2149307Domain d2p9jh_: 2p9j H: [238795]
        automated match to d2p9ja_
    2. Domains for 2yy6:
      1. 2149308Domain d2yy6a_: 2yy6 A: [170927]
        automated match to d2hsza1
        complexed with so4
      2. 2149309Domain d2yy6b_: 2yy6 B: [170928]
        automated match to d2hsza1
        complexed with so4
  2. 2149310Aquifex aeolicus [TaxId:63363] [187934] (1 PDB entry)
  3. 2149312Archaeoglobus fulgidus [TaxId:2234] [189636] (2 PDB entries)
    1. Domains for 3qgm:
      1. 2149315Domain d3qgma_: 3qgm A: [184379]
        automated match to d1vjra_
        complexed with ca, edo
      2. 2149316Domain d3qgmb_: 3qgm B: [184380]
        automated match to d1vjra_
        complexed with ca, edo
      3. 2149317Domain d3qgmc_: 3qgm C: [184381]
        automated match to d1vjra_
        complexed with ca, edo
      4. 2149318Domain d3qgmd_: 3qgm D: [184382]
        automated match to d1vjra_
        complexed with ca, edo
    2. Domains for 4jdp:
      1. 2149313Domain d4jdpa_: 4jdp A: [223752]
        Other proteins in same PDB: d4jdpb2
        automated match to d3qgmc_
        complexed with cl, mg
      2. 2149314Domain d4jdpb1: 4jdp B:1-263 [223753]
        Other proteins in same PDB: d4jdpb2
        automated match to d3qgmc_
        complexed with cl, mg
  4. 2149319Bacillus subtilis [TaxId:1423] [188499] (5 PDB entries)
    1. Domain for 3dnp:
    2. Domain for 3ed5:
    3. Domains for 3i76:
      1. 2149323Domain d3i76a_: 3i76 A: [178123]
        automated match to d2gfha1
        complexed with cl, gol, mg
      2. 2149324Domain d3i76b_: 3i76 B: [178124]
        automated match to d2gfha1
        complexed with cl, gol, mg
      3. 2149325Domain d3i76c_: 3i76 C: [178125]
        automated match to d2gfha1
        complexed with cl, gol, mg
    4. Domains for 3nas:
      1. 2149326Domain d3nasa1: 3nas A:2-223 [247871]
        Other proteins in same PDB: d3nasa2
        automated match to d1o08a_
      2. 2149327Domain d3nasb_: 3nas B: [247872]
        Other proteins in same PDB: d3nasa2
        automated match to d1o08a_
    5. Domain for 3pdw:
  5. 2149328Bacteroides thetaiotaomicron [TaxId:226186] [224914] (4 PDB entries)
    1. Domains for 4hgn:
      1. 2149329Domain d4hgna_: 4hgn A: [222574]
        automated match to d3nrjl_
        complexed with fmt, mg
      2. 2149330Domain d4hgnb_: 4hgn B: [222575]
        automated match to d3nrjl_
        complexed with fmt, mg
      3. 2149331Domain d4hgnc_: 4hgn C: [222576]
        automated match to d3nrjl_
        complexed with fmt, mg
      4. 2149332Domain d4hgnd_: 4hgn D: [222577]
        automated match to d3nrjl_
        complexed with fmt, mg
    2. Domains for 4hgo:
      1. 2149341Domain d4hgoa_: 4hgo A: [222578]
        automated match to d3nrjl_
        complexed with kdn, mg, vn4
      2. 2149342Domain d4hgob_: 4hgo B: [222579]
        automated match to d3nrjl_
        complexed with kdn, mg, vn4
      3. 2149343Domain d4hgoc_: 4hgo C: [222580]
        automated match to d3nrjl_
        complexed with kdn, mg, vn4
      4. 2149344Domain d4hgod_: 4hgo D: [222581]
        automated match to d3nrjl_
        complexed with kdn, mg, vn4
    3. Domains for 4hgq:
      1. 2149345Domain d4hgqa_: 4hgq A: [222582]
        automated match to d3nrjl_
        complexed with mg; mutant
      2. 2149346Domain d4hgqb_: 4hgq B: [222583]
        automated match to d3nrjl_
        complexed with mg; mutant
      3. 2149347Domain d4hgqc_: 4hgq C: [222584]
        automated match to d3nrjl_
        complexed with mg; mutant
      4. 2149348Domain d4hgqd_: 4hgq D: [222585]
        automated match to d3nrjl_
        complexed with mg; mutant
      5. 2149349Domain d4hgqe_: 4hgq E: [222586]
        automated match to d3nrjl_
        complexed with mg; mutant
      6. 2149350Domain d4hgqf_: 4hgq F: [222587]
        automated match to d3nrjl_
        complexed with mg; mutant
      7. 2149351Domain d4hgqg_: 4hgq G: [222588]
        automated match to d3nrjl_
        complexed with mg; mutant
      8. 2149352Domain d4hgqh_: 4hgq H: [222589]
        automated match to d3nrjl_
        complexed with mg; mutant
    4. Domains for 4hgr:
      1. 2149333Domain d4hgra_: 4hgr A: [222590]
        automated match to d3nrjl_
        complexed with mg; mutant
      2. 2149334Domain d4hgrb_: 4hgr B: [222591]
        automated match to d3nrjl_
        complexed with mg; mutant
      3. 2149335Domain d4hgrc_: 4hgr C: [222592]
        automated match to d3nrjl_
        complexed with mg; mutant
      4. 2149336Domain d4hgrd_: 4hgr D: [222593]
        automated match to d3nrjl_
        complexed with mg; mutant
      5. 2149337Domain d4hgre_: 4hgr E: [222594]
        automated match to d3nrjl_
        complexed with mg; mutant
      6. 2149338Domain d4hgrf_: 4hgr F: [222595]
        automated match to d3nrjl_
        complexed with mg; mutant
      7. 2149339Domain d4hgrg_: 4hgr G: [222596]
        automated match to d3nrjl_
        complexed with mg; mutant
      8. 2149340Domain d4hgrh_: 4hgr H: [222597]
        automated match to d3nrjl_
        complexed with mg; mutant
  6. 2149353Bacteroides thetaiotaomicron [TaxId:818] [189385] (21 PDB entries)
    1. Domains for 3e81:
      1. 2149365Domain d3e81a_: 3e81 A: [209411]
        automated match to d3nrjl_
        complexed with edo, mg, peg, slb, vn4
      2. 2149366Domain d3e81b_: 3e81 B: [209412]
        automated match to d3nrjl_
        complexed with edo, mg, peg, slb, vn4
      3. 2149367Domain d3e81c_: 3e81 C: [209413]
        automated match to d3nrjl_
        complexed with edo, mg, peg, slb, vn4
      4. 2149368Domain d3e81d_: 3e81 D: [209414]
        automated match to d3nrjl_
        complexed with edo, mg, peg, slb, vn4
    2. Domains for 3e84:
      1. 2149374Domain d3e84a_: 3e84 A: [209415]
        automated match to d3nrjl_
        complexed with edo, mg, peg, wo4
      2. 2149375Domain d3e84b_: 3e84 B: [209416]
        automated match to d3nrjl_
        complexed with edo, mg, peg, wo4
      3. 2149376Domain d3e84c_: 3e84 C: [209417]
        automated match to d3nrjl_
        complexed with edo, mg, peg, wo4
      4. 2149377Domain d3e84d_: 3e84 D: [209418]
        automated match to d3nrjl_
        complexed with edo, mg, peg, wo4
    3. Domains for 3e8m:
      1. 2149354Domain d3e8ma_: 3e8m A: [209419]
        automated match to d3nrjl_
        complexed with acy, cl, edo, mg, peg, pg4, pge
      2. 2149355Domain d3e8mb_: 3e8m B: [209420]
        automated match to d3nrjl_
        complexed with acy, cl, edo, mg, peg, pg4, pge
      3. 2149356Domain d3e8mc_: 3e8m C: [209421]
        automated match to d3nrjl_
        complexed with acy, cl, edo, mg, peg, pg4, pge
      4. 2149357Domain d3e8md_: 3e8m D: [209422]
        automated match to d3nrjl_
        complexed with acy, cl, edo, mg, peg, pg4, pge
    4. Domain for 3niw:
    5. Domain for 3qnm:
    6. Domains for 3qu2:
      1. 2149385Domain d3qu2a_: 3qu2 A: [215419]
        automated match to d2hi0b_
        complexed with cit, cl, gol, mg
      2. 2149386Domain d3qu2b_: 3qu2 B: [215420]
        automated match to d2hi0b_
        complexed with cit, cl, gol, mg
      3. 2149387Domain d3qu2c_: 3qu2 C: [215421]
        automated match to d2hi0b_
        complexed with cit, cl, gol, mg
      4. 2149388Domain d3qu2d_: 3qu2 D: [215422]
        automated match to d2hi0b_
        complexed with cit, cl, gol, mg
    7. Domains for 3qu4:
      1. 2149390Domain d3qu4a_: 3qu4 A: [233351]
        Other proteins in same PDB: d3qu4d2, d3qu4e2
        automated match to d3qypb_
        complexed with act, cl, mg; mutant
      2. 2149391Domain d3qu4b_: 3qu4 B: [233350]
        Other proteins in same PDB: d3qu4d2, d3qu4e2
        automated match to d3qypb_
        complexed with act, cl, mg; mutant
      3. 2149392Domain d3qu4c_: 3qu4 C: [239651]
        Other proteins in same PDB: d3qu4d2, d3qu4e2
        automated match to d3qu4a_
        complexed with act, cl, mg; mutant
      4. 2149393Domain d3qu4d1: 3qu4 D:1-224 [239652]
        Other proteins in same PDB: d3qu4d2, d3qu4e2
        automated match to d3qu4a_
        complexed with act, cl, mg; mutant
      5. 2149394Domain d3qu4e1: 3qu4 E:1-224 [239653]
        Other proteins in same PDB: d3qu4d2, d3qu4e2
        automated match to d3qu4a_
        complexed with act, cl, mg; mutant
      6. 2149395Domain d3qu4f_: 3qu4 F: [239654]
        Other proteins in same PDB: d3qu4d2, d3qu4e2
        automated match to d3qu4b_
        complexed with act, cl, mg; mutant
      7. 2149396Domain d3qu4g_: 3qu4 G: [239655]
        Other proteins in same PDB: d3qu4d2, d3qu4e2
        automated match to d3qu4a_
        complexed with act, cl, mg; mutant
      8. 2149397Domain d3qu4h_: 3qu4 H: [239656]
        Other proteins in same PDB: d3qu4d2, d3qu4e2
        automated match to d3qu4a_
        complexed with act, cl, mg; mutant
    8. Domains for 3qu5:
      1. 2149358Domain d3qu5a_: 3qu5 A: [233352]
        Other proteins in same PDB: d3qu5b2
        automated match to d3qypb_
        complexed with cl; mutant
      2. 2149359Domain d3qu5b1: 3qu5 B:1-224 [233353]
        Other proteins in same PDB: d3qu5b2
        automated match to d3qypb_
        complexed with cl; mutant
    9. Domains for 3qu7:
      1. 2149380Domain d3qu7a_: 3qu7 A: [233354]
        automated match to d3qypb_
        complexed with act, ca, po4; mutant
      2. 2149381Domain d3qu7b_: 3qu7 B: [233355]
        automated match to d3qypb_
        complexed with act, ca, po4; mutant
    10. Domain for 3qu9:
    11. Domain for 3qub:
    12. Domain for 3quc:
    13. Domain for 3quq:
    14. Domain for 3qut:
    15. Domain for 3qx7:
    16. Domains for 3qxg:
      1. 2149360Domain d3qxga_: 3qxg A: [215485]
        automated match to d2hi0b_
        complexed with act, ca, mg, po4, tla
      2. 2149361Domain d3qxgb_: 3qxg B: [215486]
        automated match to d2hi0b_
        complexed with act, ca, mg, po4, tla
    17. Domains for 3qyp:
      1. 2149370Domain d3qypa_: 3qyp A: [215492]
        Other proteins in same PDB: d3qypb2
        automated match to d2hi0b_
        complexed with ca, cl, gol, po4, unl; mutant
      2. 2149371Domain d3qypb1: 3qyp B:1-224 [215493]
        Other proteins in same PDB: d3qypb2
        automated match to d2hi0b_
        complexed with ca, cl, gol, po4, unl; mutant
    18. Domain for 3r4c:
    19. Domain for 3r9k:
    20. Domain for 4dw8:
    21. Domain for 4dwo:
  7. 2149398Bacteroides vulgatus [TaxId:435590] [232039] (1 PDB entry)
  8. 2149400Burkholderia cepacia [TaxId:292] [225309] (2 PDB entries)
    1. Domains for 2no4:
      1. 2149401Domain d2no4a1: 2no4 A:2-225 [205120]
        Other proteins in same PDB: d2no4a2, d2no4b2
        automated match to d1juda_
        complexed with cl, so4
      2. 2149402Domain d2no4b1: 2no4 B:2-226 [205121]
        Other proteins in same PDB: d2no4a2, d2no4b2
        automated match to d1juda_
        complexed with cl, so4
    2. Domains for 2no5:
      1. 2149403Domain d2no5a1: 2no5 A:2-225 [205122]
        Other proteins in same PDB: d2no5a2, d2no5b2
        automated match to d1juda_
        complexed with cl, cnr, so4
      2. 2149404Domain d2no5b1: 2no5 B:2-226 [205123]
        Other proteins in same PDB: d2no5a2, d2no5b2
        automated match to d1juda_
        complexed with cl, cnr, so4
  9. 2149405Clostridium acetobutylicum [TaxId:1488] [189302] (1 PDB entry)
  10. 2149408Clostridium difficile [TaxId:272563] [188776] (2 PDB entries)
    1. Domains for 3fzq:
      1. 2149410Domain d3fzqa_: 3fzq A: [176217]
        automated match to d1nf2a_
        complexed with edo, na, po4
      2. 2149411Domain d3fzqb_: 3fzq B: [176218]
        automated match to d1nf2a_
        complexed with edo, na, po4
    2. Domain for 3sd7:
  11. 2149412Cytophaga hutchinsonii [TaxId:985] [187831] (1 PDB entry)
  12. 2149417Escherichia coli K-12 [TaxId:83333] [226440] (1 PDB entry)
  13. 2149419Escherichia coli [TaxId:217992] [225533] (2 PDB entries)
    1. Domains for 2r8e:
      1. 2149420Domain d2r8ea_: 2r8e A: [205982]
        automated match to d3n07d_
        complexed with cl, mg
      2. 2149421Domain d2r8eb_: 2r8e B: [205983]
        automated match to d3n07d_
        complexed with cl, mg
      3. 2149422Domain d2r8ec_: 2r8e C: [205984]
        automated match to d3n07d_
        complexed with cl, mg
      4. 2149423Domain d2r8ed_: 2r8e D: [205985]
        automated match to d3n07d_
        complexed with cl, mg
      5. 2149424Domain d2r8ee_: 2r8e E: [205986]
        automated match to d3n07d_
        complexed with cl, mg
      6. 2149425Domain d2r8ef_: 2r8e F: [205987]
        automated match to d3n07d_
        complexed with cl, mg
      7. 2149426Domain d2r8eg_: 2r8e G: [205988]
        automated match to d3n07d_
        complexed with cl, mg
      8. 2149427Domain d2r8eh_: 2r8e H: [205989]
        automated match to d3n07d_
        complexed with cl, mg
    2. Domains for 2r8z:
      1. 2149428Domain d2r8za_: 2r8z A: [206022]
        automated match to d3n07d_
        complexed with ca, po4
      2. 2149429Domain d2r8zb_: 2r8z B: [206023]
        automated match to d3n07d_
        complexed with ca, po4
      3. 2149430Domain d2r8zc_: 2r8z C: [206024]
        automated match to d3n07d_
        complexed with ca, po4
      4. 2149431Domain d2r8zd_: 2r8z D: [206025]
        automated match to d3n07d_
        complexed with ca, po4
      5. 2149432Domain d2r8ze_: 2r8z E: [206026]
        automated match to d3n07d_
        complexed with ca, po4
      6. 2149433Domain d2r8zf_: 2r8z F: [206027]
        automated match to d3n07d_
        complexed with ca, po4
      7. 2149434Domain d2r8zg_: 2r8z G: [206028]
        automated match to d3n07d_
        complexed with ca, po4
      8. 2149435Domain d2r8zh_: 2r8z H: [206029]
        automated match to d3n07d_
        complexed with ca, po4
      9. 2149436Domain d2r8zi_: 2r8z I: [206030]
        automated match to d3n07d_
        complexed with ca, po4
      10. 2149437Domain d2r8zj_: 2r8z J: [206031]
        automated match to d3n07d_
        complexed with ca, po4
      11. 2149438Domain d2r8zk_: 2r8z K: [206032]
        automated match to d3n07d_
        complexed with ca, po4
      12. 2149439Domain d2r8zl_: 2r8z L: [206033]
        automated match to d3n07d_
        complexed with ca, po4
      13. 2149440Domain d2r8zm_: 2r8z M: [206034]
        automated match to d3n07d_
        complexed with ca, po4
      14. 2149441Domain d2r8zn_: 2r8z N: [206035]
        automated match to d3n07d_
        complexed with ca, po4
      15. 2149442Domain d2r8zo_: 2r8z O: [206036]
        automated match to d3n07d_
        complexed with ca, po4
      16. 2149443Domain d2r8zp_: 2r8z P: [206037]
        automated match to d3n07d_
        complexed with ca, po4
  14. 2149444Escherichia coli [TaxId:37762] [232551] (1 PDB entry)
  15. 2149446Escherichia coli [TaxId:562] [225534] (4 PDB entries)
    1. Domains for 2r8x:
      1. 2149466Domain d2r8xa_: 2r8x A: [205990]
        automated match to d3n07d_
        complexed with cl
      2. 2149467Domain d2r8xb_: 2r8x B: [205991]
        automated match to d3n07d_
        complexed with cl
      3. 2149468Domain d2r8xc_: 2r8x C: [205992]
        automated match to d3n07d_
        complexed with cl
      4. 2149469Domain d2r8xd_: 2r8x D: [205993]
        automated match to d3n07d_
        complexed with cl
      5. 2149470Domain d2r8xe_: 2r8x E: [205994]
        automated match to d3n07d_
        complexed with cl
      6. 2149471Domain d2r8xf_: 2r8x F: [205995]
        automated match to d3n07d_
        complexed with cl
      7. 2149472Domain d2r8xg_: 2r8x G: [205996]
        automated match to d3n07d_
        complexed with cl
      8. 2149473Domain d2r8xh_: 2r8x H: [205997]
        automated match to d3n07d_
        complexed with cl
      9. 2149474Domain d2r8xi_: 2r8x I: [205998]
        automated match to d3n07d_
        complexed with cl
      10. 2149475Domain d2r8xj_: 2r8x J: [205999]
        automated match to d3n07d_
        complexed with cl
      11. 2149476Domain d2r8xk_: 2r8x K: [206000]
        automated match to d3n07d_
        complexed with cl
      12. 2149477Domain d2r8xl_: 2r8x L: [206001]
        automated match to d3n07d_
        complexed with cl
      13. 2149478Domain d2r8xm_: 2r8x M: [206002]
        automated match to d3n07d_
        complexed with cl
      14. 2149479Domain d2r8xn_: 2r8x N: [206003]
        automated match to d3n07d_
        complexed with cl
      15. 2149480Domain d2r8xo_: 2r8x O: [206004]
        automated match to d3n07d_
        complexed with cl
      16. 2149481Domain d2r8xp_: 2r8x P: [206005]
        automated match to d3n07d_
        complexed with cl
    2. Domains for 2r8y:
      1. 2149447Domain d2r8ya_: 2r8y A: [206006]
        automated match to d3n07d_
        complexed with ca, cl
      2. 2149448Domain d2r8yb_: 2r8y B: [206007]
        automated match to d3n07d_
        complexed with ca, cl
      3. 2149449Domain d2r8yc_: 2r8y C: [206008]
        automated match to d3n07d_
        complexed with ca, cl
      4. 2149450Domain d2r8yd_: 2r8y D: [206009]
        automated match to d3n07d_
        complexed with ca, cl
      5. 2149451Domain d2r8ye_: 2r8y E: [206010]
        automated match to d3n07d_
        complexed with ca, cl
      6. 2149452Domain d2r8yf_: 2r8y F: [206011]
        automated match to d3n07d_
        complexed with ca, cl
      7. 2149453Domain d2r8yg_: 2r8y G: [206012]
        automated match to d3n07d_
        complexed with ca, cl
      8. 2149454Domain d2r8yh_: 2r8y H: [206013]
        automated match to d3n07d_
        complexed with ca, cl
      9. 2149455Domain d2r8yi_: 2r8y I: [206014]
        automated match to d3n07d_
        complexed with ca, cl
      10. 2149456Domain d2r8yj_: 2r8y J: [206015]
        automated match to d3n07d_
        complexed with ca, cl
      11. 2149457Domain d2r8yk_: 2r8y K: [206016]
        automated match to d3n07d_
        complexed with ca, cl
      12. 2149458Domain d2r8yl_: 2r8y L: [206017]
        automated match to d3n07d_
        complexed with ca, cl
      13. 2149459Domain d2r8ym_: 2r8y M: [206018]
        automated match to d3n07d_
        complexed with ca, cl
      14. 2149460Domain d2r8yn_: 2r8y N: [206019]
        automated match to d3n07d_
        complexed with ca, cl
      15. 2149461Domain d2r8yo_: 2r8y O: [206020]
        automated match to d3n07d_
        complexed with ca, cl
      16. 2149462Domain d2r8yp_: 2r8y P: [206021]
        automated match to d3n07d_
        complexed with ca, cl
    3. Domains for 3hyc:
      1. 2149482Domain d3hyca_: 3hyc A: [246606]
        automated match to d2r8xh_
        complexed with cl, mg
      2. 2149483Domain d3hycb_: 3hyc B: [246607]
        automated match to d2r8xh_
        complexed with cl, mg
      3. 2149484Domain d3hycc_: 3hyc C: [246608]
        automated match to d2r8xh_
        complexed with cl, mg
      4. 2149485Domain d3hycd_: 3hyc D: [246609]
        automated match to d2r8xh_
        complexed with cl, mg
      5. 2149486Domain d3hyce_: 3hyc E: [246610]
        automated match to d2r8xh_
        complexed with cl, mg
      6. 2149487Domain d3hycf_: 3hyc F: [246611]
        automated match to d2r8xh_
        complexed with cl, mg
      7. 2149488Domain d3hycg_: 3hyc G: [246612]
        automated match to d2r8xh_
        complexed with cl, mg
      8. 2149489Domain d3hych_: 3hyc H: [246613]
        automated match to d2r8xh_
        complexed with cl, mg
    4. Domains for 3i6b:
      1. 2149463Domain d3i6bb_: 3i6b B: [232553]
        automated match to d2r8xh_
        complexed with kdo, mg, po4
      2. 2149464Domain d3i6bc_: 3i6b C: [239351]
        automated match to d3i6bb_
        complexed with kdo, mg, po4
      3. 2149465Domain d3i6bd_: 3i6b D: [239352]
        automated match to d3i6bb_
        complexed with kdo, mg, po4
  16. 2149490Eubacterium rectale [225485] (1 PDB entry)
  17. 2149493Fruit fly (Drosophila melanogaster) [TaxId:7227] [237855] (2 PDB entries)
    1. Domains for 4nv0:
      1. 2149494Domain d4nv0a_: 4nv0 A: [237856]
        automated match to d2g09a_
        complexed with mg, mg7, mgf, pge
      2. 2149495Domain d4nv0b_: 4nv0 B: [240660]
        automated match to d4nv0a_
        complexed with mg, mg7, mgf, pge
    2. Domains for 4nwi:
      1. 2149496Domain d4nwia_: 4nwi A: [254027]
        automated match to d4nv0a_
        complexed with cl, ctn, mg
      2. 2149497Domain d4nwib_: 4nwi B: [254028]
        automated match to d4nv0a_
        complexed with cl, ctn, mg
  18. 2149498Geobacillus kaustophilus [TaxId:1462] [188567] (1 PDB entry)
  19. 2149503Geobacillus kaustophilus [TaxId:235909] [188431] (1 PDB entry)
  20. 2149506Geobacillus stearothermophilus [TaxId:1422] [229821] (4 PDB entries)
    1. Domains for 4ift:
      1. 2149511Domain d4ifta_: 4ift A: [229822]
        automated match to d3pdwa_
        mutant
      2. 2149512Domain d4iftb_: 4ift B: [234846]
        automated match to d4ifta_
        mutant
    2. Domains for 4ig4:
      1. 2149513Domain d4ig4a_: 4ig4 A: [229825]
        automated match to d3pdwa_
        mutant
      2. 2149514Domain d4ig4b_: 4ig4 B: [229826]
        automated match to d3pdwa_
        mutant
    3. Domains for 4kn8:
      1. 2149507Domain d4kn8a_: 4kn8 A: [240425]
        automated match to d4kn8b_
      2. 2149508Domain d4kn8b_: 4kn8 B: [238404]
        automated match to d1pw5a_
    4. Domains for 4o8c:
      1. 2149509Domain d4o8ca_: 4o8c A: [257236]
        automated match to d4kn8b_
        complexed with mg, so4; mutant
      2. 2149510Domain d4o8cb_: 4o8c B: [263257]
        automated match to d4o8ca_
        complexed with mg, so4; mutant
  21. 2149515Helicobacter pylori [TaxId:210] [189290] (1 PDB entry)
  22. 2149520Human (Homo sapiens) [TaxId:9606] [188990] (12 PDB entries)
    1. Domain for 2cfr:
    2. Domain for 2cfs:
    3. Domain for 2cft:
    4. Domain for 2oyc:
    5. Domain for 2p27:
    6. Domain for 2p69:
    7. Domains for 2x4d:
      1. 2149526Domain d2x4da_: 2x4d A: [169851]
        automated match to d1pw5a_
        complexed with epe, gol, mg, pop
      2. 2149527Domain d2x4db_: 2x4d B: [169852]
        automated match to d1pw5a_
        complexed with epe, gol, mg, pop
    8. Domains for 3hlt:
      1. 2149529Domain d3hlta1: 3hlt A:5-259 [177680]
        Other proteins in same PDB: d3hlta2
        automated match to d1yv9a1
        complexed with cl, na, so4
      2. 2149530Domain d3hltc_: 3hlt C: [177681]
        Other proteins in same PDB: d3hlta2
        automated match to d1yv9a1
        complexed with cl, na, so4
    9. Domain for 3k1z:
    10. Domain for 3l5k:
    11. Domains for 5cqz:
      1. 2149533Domain d5cqza_: 5cqz A: [280291]
        automated match to d4ohfa_
        complexed with 53o, gol, mg, so4
      2. 2149534Domain d5cqzb_: 5cqz B: [280292]
        automated match to d4ohfa_
        complexed with 53o, gol, mg, so4
    12. Domains for 5cr7:
      1. 2149535Domain d5cr7a_: 5cr7 A: [280293]
        automated match to d4ohfa_
        complexed with 5wo, act, gol, mg, po4
      2. 2149536Domain d5cr7b_: 5cr7 B: [280294]
        automated match to d4ohfa_
        complexed with 5wo, act, gol, mg, po4
  23. 2149537Klebsiella pneumoniae [TaxId:272620] [226041] (1 PDB entry)
  24. 2149542Lactobacillus brevis [TaxId:387344] [189330] (1 PDB entry)
  25. 2149547Lactobacillus delbrueckii [TaxId:1584] [187809] (1 PDB entry)
  26. 2149550Lactococcus lactis [TaxId:416870] [228017] (1 PDB entry)
  27. 2149553Legionella pneumophila [TaxId:272624] [189400] (1 PDB entry)
  28. 2149555Moraxella catarrhalis [TaxId:857574] [269413] (5 PDB entries)
    1. Domains for 4um5:
      1. 2149562Domain d4um5a_: 4um5 A: [269414]
        automated match to d3n1ua_
        complexed with edo, mg, po4
      2. 2149563Domain d4um5b_: 4um5 B: [269417]
        automated match to d3n1ua_
        complexed with edo, mg, po4
      3. 2149564Domain d4um5c_: 4um5 C: [269416]
        automated match to d3n1ua_
        complexed with edo, mg, po4
      4. 2149565Domain d4um5d_: 4um5 D: [269415]
        automated match to d3n1ua_
        complexed with edo, mg, po4
    2. Domains for 4um7:
      1. 2149556Domain d4um7a1: 4um7 A:1-173 [269418]
        Other proteins in same PDB: d4um7a2, d4um7c2, d4um7d2
        automated match to d3n1ua_
        complexed with edo, mg
      2. 2149557Domain d4um7b_: 4um7 B: [269419]
        Other proteins in same PDB: d4um7a2, d4um7c2, d4um7d2
        automated match to d3n1ua_
        complexed with edo, mg
      3. 2149558Domain d4um7c1: 4um7 C:1-173 [269421]
        Other proteins in same PDB: d4um7a2, d4um7c2, d4um7d2
        automated match to d3n1ua_
        complexed with edo, mg
      4. 2149559Domain d4um7d1: 4um7 D:1-173 [269423]
        Other proteins in same PDB: d4um7a2, d4um7c2, d4um7d2
        automated match to d3n1ua_
        complexed with edo, mg
    3. Domain for 4umd:
    4. Domain for 4ume:
    5. Domains for 4umf:
      1. 2149566Domain d4umfa_: 4umf A: [269425]
        Other proteins in same PDB: d4umfc2
        automated match to d3n1ua_
        complexed with kdo, mg, po4
      2. 2149567Domain d4umfb_: 4umf B: [269427]
        Other proteins in same PDB: d4umfc2
        automated match to d3n1ua_
        complexed with kdo, mg, po4
      3. 2149568Domain d4umfc1: 4umf C:1-173 [269424]
        Other proteins in same PDB: d4umfc2
        automated match to d3n1ua_
        complexed with kdo, mg, po4
      4. 2149569Domain d4umfd_: 4umf D: [269422]
        Other proteins in same PDB: d4umfc2
        automated match to d3n1ua_
        complexed with kdo, mg, po4
  29. 2149570Mouse (Mus musculus) [TaxId:10090] [193863] (7 PDB entries)
    1. Domains for 2ho4:
      1. 2149578Domain d2ho4a_: 2ho4 A: [198025]
        automated match to d2ho4b_
        complexed with mg, po4
      2. 2149579Domain d2ho4b_: 2ho4 B: [193864]
        automated match to d3hlta_
        complexed with mg, po4
    2. Domains for 3ewi:
      1. 2149571Domain d3ewia_: 3ewi A: [232121]
        automated match to d4hgnb_
      2. 2149572Domain d3ewib_: 3ewi B: [232122]
        automated match to d4hgnb_
    3. Domains for 4bkm:
      1. 2149580Domain d4bkma_: 4bkm A: [234194]
        automated match to d4bx3b_
        complexed with mg, no3
      2. 2149581Domain d4bkmb_: 4bkm B: [234195]
        automated match to d4bx3b_
        complexed with mg, no3
      3. 2149582Domain d4bkmc_: 4bkm C: [234196]
        automated match to d4bx3b_
        complexed with mg, no3
      4. 2149583Domain d4bkmd_: 4bkm D: [236957]
        automated match to d4bkmb_
        complexed with mg, no3
    4. Domain for 4bx0:
    5. Domains for 4bx2:
      1. 2149574Domain d4bx2a1: 4bx2 A:1-291 [234280]
        Other proteins in same PDB: d4bx2a2
        automated match to d4bx3b_
        complexed with bef, gol, mg
      2. 2149575Domain d4bx2b_: 4bx2 B: [229999]
        Other proteins in same PDB: d4bx2a2
        automated match to d2hx1a_
        complexed with bef, gol, mg
    6. Domains for 4bx3:
      1. 2149576Domain d4bx3a1: 4bx3 A:1-290 [234281]
        Other proteins in same PDB: d4bx3a2
        automated match to d4bx3b_
        complexed with gol, mg
      2. 2149577Domain d4bx3b_: 4bx3 B: [229997]
        Other proteins in same PDB: d4bx3a2
        automated match to d2hx1a_
        complexed with gol, mg
    7. Domains for 5aes:
      1. 2149584Domain d5aesa1: 5aes A:1-290 [270936]
        Other proteins in same PDB: d5aesa2
        automated match to d4bx2a_
        complexed with 5b0, gol, mg
      2. 2149585Domain d5aesb_: 5aes B: [270937]
        Other proteins in same PDB: d5aesa2
        automated match to d4bx2a_
        complexed with 5b0, gol, mg
  30. 2149586Oleispira antarctica [TaxId:188908] [189026] (1 PDB entry)
  31. 2149589Plasmodium falciparum [TaxId:36329] [258369] (4 PDB entries)
    1. Domain for 4qjb:
    2. Domain for 4zev:
    3. Domain for 4zew:
    4. Domain for 4zex:
  32. 2149594Pseudomonas aeruginosa [TaxId:287] [256122] (1 PDB entry)
  33. 2149599Pseudomonas syringae [TaxId:223283] [226550] (1 PDB entry)
  34. 2149602Pseudomonas syringae [TaxId:264730] [196431] (2 PDB entries)
    1. Domains for 3mn1:
      1. 2149615Domain d3mn1a1: 3mn1 A:2-179 [213464]
        Other proteins in same PDB: d3mn1a2, d3mn1a3, d3mn1b2, d3mn1c2, d3mn1d2, d3mn1e2, d3mn1f2, d3mn1g2, d3mn1h2, d3mn1i2, d3mn1j2, d3mn1k2, d3mn1l2
        automated match to d3nrjl_
        complexed with cl
      2. 2149616Domain d3mn1b1: 3mn1 B:7-179 [213465]
        Other proteins in same PDB: d3mn1a2, d3mn1a3, d3mn1b2, d3mn1c2, d3mn1d2, d3mn1e2, d3mn1f2, d3mn1g2, d3mn1h2, d3mn1i2, d3mn1j2, d3mn1k2, d3mn1l2
        automated match to d3nrjl_
        complexed with cl
      3. 2149617Domain d3mn1c1: 3mn1 C:7-179 [213466]
        Other proteins in same PDB: d3mn1a2, d3mn1a3, d3mn1b2, d3mn1c2, d3mn1d2, d3mn1e2, d3mn1f2, d3mn1g2, d3mn1h2, d3mn1i2, d3mn1j2, d3mn1k2, d3mn1l2
        automated match to d3nrjl_
        complexed with cl
      4. 2149618Domain d3mn1d1: 3mn1 D:7-179 [213467]
        Other proteins in same PDB: d3mn1a2, d3mn1a3, d3mn1b2, d3mn1c2, d3mn1d2, d3mn1e2, d3mn1f2, d3mn1g2, d3mn1h2, d3mn1i2, d3mn1j2, d3mn1k2, d3mn1l2
        automated match to d3nrjl_
        complexed with cl
      5. 2149619Domain d3mn1e1: 3mn1 E:7-179 [213468]
        Other proteins in same PDB: d3mn1a2, d3mn1a3, d3mn1b2, d3mn1c2, d3mn1d2, d3mn1e2, d3mn1f2, d3mn1g2, d3mn1h2, d3mn1i2, d3mn1j2, d3mn1k2, d3mn1l2
        automated match to d3nrjl_
        complexed with cl
      6. 2149620Domain d3mn1f1: 3mn1 F:7-179 [213469]
        Other proteins in same PDB: d3mn1a2, d3mn1a3, d3mn1b2, d3mn1c2, d3mn1d2, d3mn1e2, d3mn1f2, d3mn1g2, d3mn1h2, d3mn1i2, d3mn1j2, d3mn1k2, d3mn1l2
        automated match to d3nrjl_
        complexed with cl
      7. 2149621Domain d3mn1g1: 3mn1 G:8-179 [213470]
        Other proteins in same PDB: d3mn1a2, d3mn1a3, d3mn1b2, d3mn1c2, d3mn1d2, d3mn1e2, d3mn1f2, d3mn1g2, d3mn1h2, d3mn1i2, d3mn1j2, d3mn1k2, d3mn1l2
        automated match to d3nrjl_
        complexed with cl
      8. 2149622Domain d3mn1h1: 3mn1 H:8-179 [213471]
        Other proteins in same PDB: d3mn1a2, d3mn1a3, d3mn1b2, d3mn1c2, d3mn1d2, d3mn1e2, d3mn1f2, d3mn1g2, d3mn1h2, d3mn1i2, d3mn1j2, d3mn1k2, d3mn1l2
        automated match to d3nrjl_
        complexed with cl
      9. 2149623Domain d3mn1i1: 3mn1 I:7-179 [213472]
        Other proteins in same PDB: d3mn1a2, d3mn1a3, d3mn1b2, d3mn1c2, d3mn1d2, d3mn1e2, d3mn1f2, d3mn1g2, d3mn1h2, d3mn1i2, d3mn1j2, d3mn1k2, d3mn1l2
        automated match to d3nrjl_
        complexed with cl
      10. 2149624Domain d3mn1j1: 3mn1 J:8-179 [213473]
        Other proteins in same PDB: d3mn1a2, d3mn1a3, d3mn1b2, d3mn1c2, d3mn1d2, d3mn1e2, d3mn1f2, d3mn1g2, d3mn1h2, d3mn1i2, d3mn1j2, d3mn1k2, d3mn1l2
        automated match to d3nrjl_
        complexed with cl
      11. 2149625Domain d3mn1k1: 3mn1 K:7-179 [213474]
        Other proteins in same PDB: d3mn1a2, d3mn1a3, d3mn1b2, d3mn1c2, d3mn1d2, d3mn1e2, d3mn1f2, d3mn1g2, d3mn1h2, d3mn1i2, d3mn1j2, d3mn1k2, d3mn1l2
        automated match to d3nrjl_
        complexed with cl
      12. 2149626Domain d3mn1l1: 3mn1 L:8-179 [213475]
        Other proteins in same PDB: d3mn1a2, d3mn1a3, d3mn1b2, d3mn1c2, d3mn1d2, d3mn1e2, d3mn1f2, d3mn1g2, d3mn1h2, d3mn1i2, d3mn1j2, d3mn1k2, d3mn1l2
        automated match to d3nrjl_
        complexed with cl
    2. Domains for 3nrj:
      1. 2149603Domain d3nrja1: 3nrj A:7-179 [199961]
        Other proteins in same PDB: d3nrja2, d3nrjc2, d3nrjd2, d3nrje2, d3nrjf2, d3nrjg2, d3nrjh2, d3nrji2
        automated match to d3nrjl_
        complexed with cl, mg, po4, unl
      2. 2149604Domain d3nrjb_: 3nrj B: [199962]
        Other proteins in same PDB: d3nrja2, d3nrjc2, d3nrjd2, d3nrje2, d3nrjf2, d3nrjg2, d3nrjh2, d3nrji2
        automated match to d3nrjl_
        complexed with cl, mg, po4, unl
      3. 2149605Domain d3nrjc1: 3nrj C:8-179 [199963]
        Other proteins in same PDB: d3nrja2, d3nrjc2, d3nrjd2, d3nrje2, d3nrjf2, d3nrjg2, d3nrjh2, d3nrji2
        automated match to d3nrjl_
        complexed with cl, mg, po4, unl
      4. 2149606Domain d3nrjd1: 3nrj D:9-179 [199964]
        Other proteins in same PDB: d3nrja2, d3nrjc2, d3nrjd2, d3nrje2, d3nrjf2, d3nrjg2, d3nrjh2, d3nrji2
        automated match to d3nrjl_
        complexed with cl, mg, po4, unl
      5. 2149607Domain d3nrje1: 3nrj E:6-179 [199965]
        Other proteins in same PDB: d3nrja2, d3nrjc2, d3nrjd2, d3nrje2, d3nrjf2, d3nrjg2, d3nrjh2, d3nrji2
        automated match to d3nrjl_
        complexed with cl, mg, po4, unl
      6. 2149608Domain d3nrjf1: 3nrj F:9-179 [199966]
        Other proteins in same PDB: d3nrja2, d3nrjc2, d3nrjd2, d3nrje2, d3nrjf2, d3nrjg2, d3nrjh2, d3nrji2
        automated match to d3nrjl_
        complexed with cl, mg, po4, unl
      7. 2149609Domain d3nrjg1: 3nrj G:8-179 [199967]
        Other proteins in same PDB: d3nrja2, d3nrjc2, d3nrjd2, d3nrje2, d3nrjf2, d3nrjg2, d3nrjh2, d3nrji2
        automated match to d3nrjl_
        complexed with cl, mg, po4, unl
      8. 2149610Domain d3nrjh1: 3nrj H:9-179 [199968]
        Other proteins in same PDB: d3nrja2, d3nrjc2, d3nrjd2, d3nrje2, d3nrjf2, d3nrjg2, d3nrjh2, d3nrji2
        automated match to d3nrjl_
        complexed with cl, mg, po4, unl
      9. 2149611Domain d3nrji1: 3nrj I:4-179 [199969]
        Other proteins in same PDB: d3nrja2, d3nrjc2, d3nrjd2, d3nrje2, d3nrjf2, d3nrjg2, d3nrjh2, d3nrji2
        automated match to d3nrjl_
        complexed with cl, mg, po4, unl
      10. 2149612Domain d3nrjj_: 3nrj J: [199970]
        Other proteins in same PDB: d3nrja2, d3nrjc2, d3nrjd2, d3nrje2, d3nrjf2, d3nrjg2, d3nrjh2, d3nrji2
        automated match to d3nrjl_
        complexed with cl, mg, po4, unl
      11. 2149613Domain d3nrjk_: 3nrj K: [199971]
        Other proteins in same PDB: d3nrja2, d3nrjc2, d3nrjd2, d3nrje2, d3nrjf2, d3nrjg2, d3nrjh2, d3nrji2
        automated match to d3nrjl_
        complexed with cl, mg, po4, unl
      12. 2149614Domain d3nrjl_: 3nrj L: [196432]
        Other proteins in same PDB: d3nrja2, d3nrjc2, d3nrjd2, d3nrje2, d3nrjf2, d3nrjg2, d3nrjh2, d3nrji2
        automated match to d3n1ua_
        complexed with cl, mg, po4, unl
  35. 2149627Pseudomonas syringae [TaxId:323] [189694] (1 PDB entry)
  36. 2149634Pyrococcus horikoshii OT3 [TaxId:70601] [187354] (3 PDB entries)
    1. Domains for 1zjj:
      1. 2149636Domain d1zjja_: 1zjj A: [162492]
        automated match to d1vjra_
        complexed with mg
      2. 2149637Domain d1zjjb_: 1zjj B: [162493]
        automated match to d1vjra_
        complexed with mg
    2. Domain for 2hoq:
    3. Domains for 2om6:
      1. 2149638Domain d2om6a_: 2om6 A: [205292]
        automated match to d1zrna_
        complexed with cl, mg, so4
      2. 2149639Domain d2om6b_: 2om6 B: [205293]
        automated match to d1zrna_
        complexed with cl, mg, so4
  37. 2149640Ralstonia solanacearum [TaxId:305] [194318] (1 PDB entry)
  38. 2149642Rhodobacter sphaeroides [TaxId:1063] [268925] (4 PDB entries)
    1. Domain for 4uar:
    2. Domains for 4uas:
      1. 2149643Domain d4uasa_: 4uas A: [268928]
        automated match to d1te2a_
        complexed with cl, mes, mg, po4
      2. 2149644Domain d4uasb_: 4uas B: [268926]
        automated match to d1te2a_
        complexed with cl, mes, mg, po4
    3. Domains for 4uat:
      1. 2149645Domain d4uata_: 4uat A: [268934]
        automated match to d1te2a_
        complexed with mes, mg, xbp; mutant
      2. 2149646Domain d4uatb_: 4uat B: [268929]
        automated match to d1te2a_
        complexed with mes, mg, xbp; mutant
    4. Domains for 4uau:
      1. 2149647Domain d4uaua_: 4uau A: [268931]
        automated match to d1te2a_
        complexed with mes, mg, xbp; mutant
      2. 2149648Domain d4uaub_: 4uau B: [268939]
        automated match to d1te2a_
        complexed with mes, mg, xbp; mutant
  39. 2149650Rhodococcus jostii [TaxId:101510] [267896] (1 PDB entry)
  40. 2149659Staphylococcus epidermidis [TaxId:176280] [193618] (1 PDB entry)
  41. 2149662Streptococcus mutans [TaxId:210007] [255921] (1 PDB entry)
  42. 2149664Streptococcus thermophilus [TaxId:264199] [311279] (1 PDB entry)
  43. 2149666Streptomyces avermitilis [TaxId:227882] [232929] (1 PDB entry)
  44. 2149671Sulfolobus tokodaii [TaxId:111955] [188720] (2 PDB entries)
    1. Domains for 2w11:
      1. 2149674Domain d2w11a1: 2w11 A:1-201 [168994]
        Other proteins in same PDB: d2w11a2, d2w11b2
        automated match to d1juda_
        complexed with 2op
      2. 2149675Domain d2w11b1: 2w11 B:1-201 [168995]
        Other proteins in same PDB: d2w11a2, d2w11b2
        automated match to d1juda_
        complexed with 2op
    2. Domains for 2w43:
      1. 2149672Domain d2w43a_: 2w43 A: [169049]
        automated match to d1juda_
        complexed with mes, po4
      2. 2149673Domain d2w43b_: 2w43 B: [169050]
        automated match to d1juda_
        complexed with mes, po4
  45. 2149676Thermococcus onnurineus [TaxId:523850] [271818] (3 PDB entries)
    1. Domain for 4ygq:
    2. Domain for 4ygr:
    3. Domain for 4ygs:
  46. 2149680Thermotoga maritima [TaxId:243274] [225784] (2 PDB entries)
    1. Domains for 2pib:
      1. 2149681Domain d2piba_: 2pib A: [304346]
        automated match to d3kbba_
        complexed with gol, na, so4
      2. 2149682Domain d2pibb_: 2pib B: [304347]
        automated match to d3kbba_
        complexed with gol, na, so4
    2. Domain for 3kbb:
  47. 2149684Trypanosome (Trypanosoma brucei) [TaxId:5691] [188800] (1 PDB entry)
  48. 2149687Vibrio cholerae [TaxId:666] [193720] (1 PDB entry)
  49. 2149692Xanthomonas campestris [TaxId:190485] [228883] (1 PDB entry)
  50. 2149697Yersinia pestis [TaxId:214092] [232594] (1 PDB entry)
  51. 2286047Candida albicans [TaxId:237561] [329348] (1 PDB entry)

More info for Protein automated matches from c.108.1.0: automated matches

Timeline for Protein automated matches from c.108.1.0: automated matches: