Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2142620Fold c.88: Glutaminase/Asparaginase [53773] (1 superfamily)
    consists of two non-similar alpha/beta domains, 3 layers (a/b/a) each
    Domain 1 has mixed beta-sheet of 6 strands, order 213456, strand 6 is antiparallel to the rest; left-handed crossover connection between strands 4 and 5
    Domain 2 has parallel beta-sheet of 4 strands, order 1234
  4. 2142621Superfamily c.88.1: Glutaminase/Asparaginase [53774] (2 families) (S)
  5. 2142622Family c.88.1.1: Glutaminase/Asparaginase [53775] (4 protein domains)
    automatically mapped to Pfam PF00710
  6. 2142708Protein automated matches [190446] (8 species)
    not a true protein

Species:

  1. 2142709Escherichia coli [TaxId:562] [225264] (4 PDB entries)
    1. Domains for 2him:
      1. 2142714Domain d2hima_: 2him A: [204560]
        Other proteins in same PDB: d2himb2, d2himd2
        automated match to d3ntxa_
        complexed with asn, asp, edo
      2. 2142715Domain d2himb1: 2him B:1-337 [204561]
        Other proteins in same PDB: d2himb2, d2himd2
        automated match to d3ntxa_
        complexed with asn, asp, edo
      3. 2142716Domain d2himc_: 2him C: [204562]
        Other proteins in same PDB: d2himb2, d2himd2
        automated match to d3ntxa_
        complexed with asn, asp, edo
      4. 2142717Domain d2himd1: 2him D:1-337 [204563]
        Other proteins in same PDB: d2himb2, d2himd2
        automated match to d3ntxa_
        complexed with asn, asp, edo
    2. Domains for 2p2d:
      1. 2142710Domain d2p2da_: 2p2d A: [205415]
        automated match to d3ntxa_
        complexed with gol
      2. 2142711Domain d2p2db_: 2p2d B: [205416]
        automated match to d3ntxa_
        complexed with gol
      3. 2142712Domain d2p2dc_: 2p2d C: [205417]
        automated match to d3ntxa_
        complexed with gol
      4. 2142713Domain d2p2dd_: 2p2d D: [205418]
        automated match to d3ntxa_
        complexed with gol
    3. Domains for 2p2n:
      1. 2142718Domain d2p2na_: 2p2n A: [205431]
        Other proteins in same PDB: d2p2nb2, d2p2nd2
        automated match to d3ntxa_
        complexed with asn, asp, cl, edo
      2. 2142719Domain d2p2nb1: 2p2n B:1-337 [205432]
        Other proteins in same PDB: d2p2nb2, d2p2nd2
        automated match to d3ntxa_
        complexed with asn, asp, cl, edo
      3. 2142720Domain d2p2nc_: 2p2n C: [205433]
        Other proteins in same PDB: d2p2nb2, d2p2nd2
        automated match to d3ntxa_
        complexed with asn, asp, cl, edo
      4. 2142721Domain d2p2nd1: 2p2n D:1-337 [205434]
        Other proteins in same PDB: d2p2nb2, d2p2nd2
        automated match to d3ntxa_
        complexed with asn, asp, cl, edo
    4. Domains for 5mq5:
      1. 2298227Domain d5mq5b_: 5mq5 B: [341528]
        Other proteins in same PDB: d5mq5a2
        automated match to d1nnsa_
        complexed with asp; mutant
      2. 2298229Domain d5mq5d_: 5mq5 D: [341530]
        Other proteins in same PDB: d5mq5a2
        automated match to d1nnsa_
        complexed with asp; mutant
      3. 2298239Domain d5mq5c_: 5mq5 C: [341540]
        Other proteins in same PDB: d5mq5a2
        automated match to d1nnsa_
        complexed with asp; mutant
      4. 2298249Domain d5mq5a1: 5mq5 A:1-326 [341550]
        Other proteins in same PDB: d5mq5a2
        automated match to d1nnsa_
        complexed with asp; mutant
  2. Methanothermobacter thermautotrophicus [TaxId:145262] [255110] (1 PDB entry)
  3. 2142724Pectobacterium atrosepticum [TaxId:218491] [255007] (1 PDB entry)
  4. 2142733Pectobacterium atrosepticum [TaxId:29471] [187353] (2 PDB entries)
    1. Domains for 2gvn:
      1. 2142734Domain d2gvna_: 2gvn A: [164854]
        automated match to d1hg0a_
        complexed with asp
      2. 2142735Domain d2gvnb_: 2gvn B: [164855]
        automated match to d1hg0a_
        complexed with asp
      3. 2142736Domain d2gvnc_: 2gvn C: [164856]
        automated match to d1hg0a_
        complexed with asp
      4. 2142737Domain d2gvnd_: 2gvn D: [164857]
        automated match to d1hg0a_
        complexed with asp
      5. 2142738Domain d2gvne_: 2gvn E: [164858]
        automated match to d1hg0a_
        complexed with asp
      6. 2142739Domain d2gvnf_: 2gvn F: [164859]
        automated match to d1hg0a_
        complexed with asp
      7. 2142740Domain d2gvng_: 2gvn G: [164860]
        automated match to d1hg0a_
        complexed with asp
      8. 2142741Domain d2gvnh_: 2gvn H: [164861]
        automated match to d1hg0a_
        complexed with asp
    2. Domains for 2hln:
      1. 2142742Domain d2hlna_: 2hln A: [165139]
        automated match to d1hg0a_
        complexed with glu, peg
      2. 2142743Domain d2hlnb_: 2hln B: [165140]
        automated match to d1hg0a_
        complexed with glu, peg
      3. 2142744Domain d2hlnc_: 2hln C: [165141]
        automated match to d1hg0a_
        complexed with glu, peg
      4. 2142745Domain d2hlnd_: 2hln D: [165142]
        automated match to d1hg0a_
        complexed with glu, peg
      5. 2142746Domain d2hlne_: 2hln E: [165143]
        automated match to d1hg0a_
        complexed with glu, peg
      6. 2142747Domain d2hlnf_: 2hln F: [165144]
        automated match to d1hg0a_
        complexed with glu, peg
      7. 2142748Domain d2hlng_: 2hln G: [165145]
        automated match to d1hg0a_
        complexed with glu, peg
      8. 2142749Domain d2hlnh_: 2hln H: [165146]
        automated match to d1hg0a_
        complexed with glu, peg
      9. 2142750Domain d2hlni_: 2hln I: [165147]
        automated match to d1hg0a_
        complexed with glu, peg
      10. 2142751Domain d2hlnj_: 2hln J: [165148]
        automated match to d1hg0a_
        complexed with glu, peg
      11. 2142752Domain d2hlnk_: 2hln K: [165149]
        automated match to d1hg0a_
        complexed with glu, peg
      12. 2142753Domain d2hlnl_: 2hln L: [165150]
        automated match to d1hg0a_
        complexed with glu, peg
  5. 2142754Pectobacterium carotovorum [TaxId:554] [188521] (1 PDB entry)
  6. 2142763Yersinia pestis [TaxId:214092] [189425] (1 PDB entry)
  7. 2270579Dickeya chrysanthemi [TaxId:556] [313884] (5 PDB entries)
    1. Domains for 5f52:
      1. 2270580Domain d5f52a_: 5f52 A: [313885]
        automated match to d1hg0a_
        complexed with asp, peg
      2. 2270597Domain d5f52c_: 5f52 C: [313902]
        automated match to d1hg0a_
        complexed with asp, peg
      3. 2270646Domain d5f52b_: 5f52 B: [313951]
        automated match to d1hg0a_
        complexed with asp, peg
      4. 2270651Domain d5f52d_: 5f52 D: [313956]
        automated match to d1hg0a_
        complexed with asp, peg
    2. Domains for 5hw0:
      1. 2271499Domain d5hw0b_: 5hw0 B: [314800]
        automated match to d1hg0a_
        complexed with glu
      2. 2271500Domain d5hw0d_: 5hw0 D: [314801]
        automated match to d1hg0a_
        complexed with glu
      3. 2271626Domain d5hw0c_: 5hw0 C: [314927]
        automated match to d1hg0a_
        complexed with glu
      4. 2271692Domain d5hw0a_: 5hw0 A: [314993]
        automated match to d1hg0a_
        complexed with glu
    3. Domains for 5i3z:
      1. 2275981Domain d5i3zb_: 5i3z B: [319282]
        automated match to d1hg0a_
        complexed with asp; mutant
      2. 2276000Domain d5i3zd_: 5i3z D: [319301]
        automated match to d1hg0a_
        complexed with asp; mutant
      3. 2276017Domain d5i3za_: 5i3z A: [319318]
        automated match to d1hg0a_
        complexed with asp; mutant
      4. 2276018Domain d5i3zc_: 5i3z C: [319319]
        automated match to d1hg0a_
        complexed with asp; mutant
    4. Domains for 5i48:
      1. 2276006Domain d5i48b_: 5i48 B: [319307]
        automated match to d1hg0a_
        complexed with asp; mutant
      2. 2276011Domain d5i48d_: 5i48 D: [319312]
        automated match to d1hg0a_
        complexed with asp; mutant
      3. 2276024Domain d5i48a_: 5i48 A: [319325]
        automated match to d1hg0a_
        complexed with asp; mutant
      4. 2276036Domain d5i48c_: 5i48 C: [319337]
        automated match to d1hg0a_
        complexed with asp; mutant
    5. Domains for 5i4b:
      1. 2276016Domain d5i4bb_: 5i4b B: [319317]
        automated match to d1hg0a_
        complexed with asp; mutant
      2. 2276026Domain d5i4ba_: 5i4b A: [319327]
        automated match to d1hg0a_
        complexed with asp; mutant
      3. 2276048Domain d5i4bc_: 5i4b C: [319349]
        automated match to d1hg0a_
        complexed with asp; mutant
  8. 2289049Wolinella succinogenes [TaxId:273121] [332350] (1 PDB entry)

More info for Protein automated matches from c.88.1.1: Glutaminase/Asparaginase

Timeline for Protein automated matches from c.88.1.1: Glutaminase/Asparaginase: