Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2384842Fold b.42: beta-Trefoil [50352] (8 superfamilies)
    barrel, closed; n=6, S=12; and a hairpin triplet; meander
    duplication: has internal pseudo threefold symmetry
  4. 2385622Superfamily b.42.4: STI-like [50386] (3 families) (S)
  5. 2385751Family b.42.4.0: automated matches [191368] (1 protein)
    not a true family
  6. 2385752Protein automated matches [190445] (8 species)
    not a true protein

Species:

  1. 2385753Bauhinia bauhinioides [TaxId:166014] [187352] (3 PDB entries)
    1. Domain for 2go2:
    2. Domains for 2gzb:
      1. 2385756Domain d2gzba1: 2gzb A:1-162 [164881]
        Other proteins in same PDB: d2gzba2, d2gzbb2
        automated match to d1tiea_
        complexed with iod
      2. 2385757Domain d2gzbb1: 2gzb B:1-162 [164882]
        Other proteins in same PDB: d2gzba2, d2gzbb2
        automated match to d1tiea_
        complexed with iod
    3. Domain for 4zot:
  2. 2385758Clostridium botulinum [TaxId:1491] [225676] (22 PDB entries)
    1. Domain for 2vxr:
    2. Domains for 3azv:
      1. 2385795Domain d3azva2: 3azv A:1077-1284 [245304]
        Other proteins in same PDB: d3azva1, d3azvb1
        automated match to d3r4sa2
        complexed with so4
      2. 2385796Domain d3azvb2: 3azv B:1077-1284 [245306]
        Other proteins in same PDB: d3azva1, d3azvb1
        automated match to d3r4sa2
        complexed with so4
    3. Domains for 3azw:
      1. 2385793Domain d3azwa2: 3azw A:1077-1284 [245308]
        Other proteins in same PDB: d3azwa1, d3azwb1
        automated match to d3r4sa2
        complexed with so4
      2. 2385794Domain d3azwb2: 3azw B:1077-1284 [245310]
        Other proteins in same PDB: d3azwa1, d3azwb1
        automated match to d3r4sa2
        complexed with so4
    4. Domain for 3fuq:
    5. Domain for 3mpp:
    6. Domain for 3n7j:
    7. Domains for 3n7k:
      1. 2385787Domain d3n7ka2: 3n7k A:1094-1290 [232992]
        Other proteins in same PDB: d3n7ka1, d3n7kb1
        automated match to d3btaa2
      2. 2385788Domain d3n7kb2: 3n7k B:1094-1290 [232991]
        Other proteins in same PDB: d3n7ka1, d3n7kb1
        automated match to d3btaa2
    8. Domain for 3n7l:
    9. Domain for 3n7m:
    10. Domain for 3obr:
    11. Domain for 3obt:
    12. Domain for 3ogg:
    13. Domain for 3pme:
    14. Domains for 3r4s:
      1. 2385765Domain d3r4sa2: 3r4s A:1094-1291 [233392]
        Other proteins in same PDB: d3r4sa1, d3r4sa3, d3r4sb1, d3r4sb3
        automated match to d3btaa2
        complexed with sia, slb
      2. 2385766Domain d3r4sb2: 3r4s B:1094-1291 [233390]
        Other proteins in same PDB: d3r4sa1, d3r4sa3, d3r4sb1, d3r4sb3
        automated match to d3btaa2
        complexed with sia, slb
    15. Domains for 3r4u:
      1. 2385767Domain d3r4ua2: 3r4u A:1094-1291 [233394]
        Other proteins in same PDB: d3r4ua1, d3r4ua3, d3r4ub1, d3r4ub3
        automated match to d3btaa2
      2. 2385768Domain d3r4ub2: 3r4u B:1094-1291 [239682]
        Other proteins in same PDB: d3r4ua1, d3r4ua3, d3r4ub1, d3r4ub3
        automated match to d3r4sb2
    16. Domains for 3rmx:
      1. 2385789Domain d3rmxa2: 3rmx A:1068-1276 [249173]
        Other proteins in same PDB: d3rmxa1, d3rmxb1, d3rmxc1, d3rmxd1
        automated match to d3pmea2
        mutant
      2. 2385790Domain d3rmxb2: 3rmx B:1068-1276 [249175]
        Other proteins in same PDB: d3rmxa1, d3rmxb1, d3rmxc1, d3rmxd1
        automated match to d3pmea2
        mutant
      3. 2385791Domain d3rmxc2: 3rmx C:1068-1276 [249177]
        Other proteins in same PDB: d3rmxa1, d3rmxb1, d3rmxc1, d3rmxd1
        automated match to d3pmea2
        mutant
      4. 2385792Domain d3rmxd2: 3rmx D:1068-1276 [249179]
        Other proteins in same PDB: d3rmxa1, d3rmxb1, d3rmxc1, d3rmxd1
        automated match to d3pmea2
        mutant
    17. Domains for 3rmy:
      1. 2385776Domain d3rmya2: 3rmy A:1068-1276 [249181]
        Other proteins in same PDB: d3rmya1, d3rmyb1, d3rmyc1, d3rmyd1
        automated match to d3pmea2
        complexed with gol; mutant
      2. 2385777Domain d3rmyb2: 3rmy B:1068-1276 [249183]
        Other proteins in same PDB: d3rmya1, d3rmyb1, d3rmyc1, d3rmyd1
        automated match to d3pmea2
        complexed with gol; mutant
      3. 2385778Domain d3rmyc2: 3rmy C:1068-1276 [249185]
        Other proteins in same PDB: d3rmya1, d3rmyb1, d3rmyc1, d3rmyd1
        automated match to d3pmea2
        complexed with gol; mutant
      4. 2385779Domain d3rmyd2: 3rmy D:1068-1276 [249187]
        Other proteins in same PDB: d3rmya1, d3rmyb1, d3rmyc1, d3rmyd1
        automated match to d3pmea2
        complexed with gol; mutant
    18. Domains for 3rsj:
      1. 2385769Domain d3rsja2: 3rsj A:1086-1278 [233496]
        Other proteins in same PDB: d3rsja1, d3rsjb1, d3rsjc1, d3rsjd1
        automated match to d3btaa2
      2. 2385770Domain d3rsjb2: 3rsj B:1086-1278 [239698]
        Other proteins in same PDB: d3rsja1, d3rsjb1, d3rsjc1, d3rsjd1
      3. 2385771Domain d3rsjc2: 3rsj C:1086-1278 [239700]
        Other proteins in same PDB: d3rsja1, d3rsjb1, d3rsjc1, d3rsjd1
        automated match to d3rsja2
      4. 2385772Domain d3rsjd2: 3rsj D:1086-1278 [239702]
        Other proteins in same PDB: d3rsja1, d3rsjb1, d3rsjc1, d3rsjd1
        automated match to d3rsja2
    19. Domain for 4f83:
    20. Domains for 4fvv:
      1. 2385782Domain d4fvva2: 4fvv A:1077-1283 [252086]
        Other proteins in same PDB: d4fvva1, d4fvvb1
        automated match to d3r4sa2
        complexed with gol, sia, so4
      2. 2385783Domain d4fvvb2: 4fvv B:1077-1283 [252088]
        Other proteins in same PDB: d4fvva1, d4fvvb1
        automated match to d3r4sa2
        complexed with gol, sia, so4
    21. Domain for 4iqp:
    22. Domains for 5lr0:
      1. 2385785Domain d5lr0a2: 5lr0 A:1077-1284 [338531]
        Other proteins in same PDB: d5lr0a1, d5lr0b1
        automated match to d3n7ma2
        complexed with gal, nga, sia
      2. 2385786Domain d5lr0b2: 5lr0 B:1077-1284 [338527]
        Other proteins in same PDB: d5lr0a1, d5lr0b1
        automated match to d3n7ma2
        complexed with gal, nga, sia
  3. 2385797Enterolobium contortisiliquum [TaxId:55671] [197031] (2 PDB entries)
    1. Domains for 4j2k:
      1. 2385798Domain d4j2ka_: 4j2k A: [197032]
        automated match to d1tiea_
        complexed with gol, imd
      2. 2385799Domain d4j2kb_: 4j2k B: [202686]
        automated match to d4j2ka_
        complexed with gol, imd
    2. Domain for 4j2y:
  4. 2385801Mucuna pruriens [TaxId:157652] [313698] (1 PDB entry)
  5. 2385803Murraya koenigii [TaxId:311449] [189153] (3 PDB entries)
    1. Domains for 3iir:
      1. 2385806Domain d3iira_: 3iir A: [178337]
        automated match to d1r8na_
      2. 2385807Domain d3iirb_: 3iir B: [178338]
        automated match to d1r8na_
    2. Domain for 3zc8:
    3. Domain for 3zc9:
  6. 2385808Potato (Solanum tuberosum) [TaxId:4113] [226410] (9 PDB entries)
    1. Domains for 3tc2:
      1. 2385809Domain d3tc2a_: 3tc2 A: [216730]
        automated match to d1ba7a_
      2. 2385810Domain d3tc2b_: 3tc2 B: [216731]
        automated match to d1ba7a_
      3. 2385811Domain d3tc2c_: 3tc2 C: [216732]
        automated match to d1ba7a_
    2. Domain for 5dvh:
    3. Domains for 5dzu:
      1. 2385813Domain d5dzua_: 5dzu A: [278359]
        automated match to d3tc2c_
        complexed with edo, gol, nag
      2. 2385814Domain d5dzub_: 5dzu B: [278358]
        automated match to d3tc2c_
        complexed with edo, gol, nag
    4. Domain for 5fnw:
    5. Domain for 5fnx:
    6. Domain for 5fzu:
    7. Domains for 5fzy:
      1. 2385817Domain d5fzya_: 5fzy A: [319288]
        automated match to d5dzua_
      2. 2385818Domain d5fzyb_: 5fzy B: [319295]
        automated match to d5dzua_
    8. Domain for 5fzz:
    9. Domain for 5g00:
  7. 3053484Alocasia macrorrhizos [TaxId:4456] [353546] (2 PDB entries)
    1. Domains for 5wvx:
      1. 3053485Domain d5wvxa_: 5wvx A: [353547]
        automated match to d5dvha_
        complexed with cit, nga
      2. 3053556Domain d5wvxb_: 5wvx B: [353618]
        automated match to d5dvha_
        complexed with cit, nga
    2. Domains for 5ycz:
      1. 3053513Domain d5yczb_: 5ycz B: [353575]
        automated match to d5dvha_
      2. 3053520Domain d5ycza_: 5ycz A: [353582]
        automated match to d5dvha_
  8. 3058315Vitis vinifera [TaxId:29760] [358377] (1 PDB entry)

More info for Protein automated matches from b.42.4.0: automated matches

Timeline for Protein automated matches from b.42.4.0: automated matches: