SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2068816Fold b.76: open-sided beta-meander [51086] (2 superfamilies)
    single sheet formed by beta-hairpin repeats; exposed on both sides in the middle
  4. 2068817Superfamily b.76.1: Outer surface protein [51087] (1 family) (S)
    21 stranded sheet partly folded upon itself at the ends
  5. 2068818Family b.76.1.1: Outer surface protein [51088] (3 protein domains)
  6. 2068830Protein automated matches [190440] (2 species)
    not a true protein

Species:

  1. 2068831Lyme disease spirochete (Borrelia burgdorferi) [TaxId:139] [188450] (15 PDB entries)
    1. Domain for 2g8c:
    2. Domain for 2i5v:
    3. Domain for 2i5z:
    4. Domain for 2ol6:
    5. Domains for 2ol7:
      1. 2068837Domain d2ol7a1: 2ol7 A:27-273 [166760]
        Other proteins in same PDB: d2ol7a2
        automated match to d1fj1e_
        mutant
      2. 2068838Domain d2ol7b_: 2ol7 B: [166761]
        Other proteins in same PDB: d2ol7a2
        automated match to d1fj1e_
        mutant
    6. Domain for 2ol8:
    7. Domain for 2oy1:
    8. Domain for 2oy5:
    9. Domain for 2oyb:
    10. Domain for 2pi3:
    11. Domain for 3aum:
    12. Domain for 3ckf:
    13. Domain for 3ckg:
    14. Domain for 5b2a:
    15. Domain for 5b3m:
  2. 2283076Borrelia burgdorferi [TaxId:224326] [326377] (2 PDB entries)
    1. Domain for 5b10:
    2. Domain for 5b11:

More info for Protein automated matches from b.76.1.1: Outer surface protein

Timeline for Protein automated matches from b.76.1.1: Outer surface protein: