Lineage for Protein: automated matches

  1. Root: SCOPe 2.01
  2. 901761Class a: All alpha proteins [46456] (284 folds)
  3. 910725Fold a.25: Ferritin-like [47239] (6 superfamilies)
    core: 4 helices; bundle, closed, left-handed twist; 1 crossover connection
  4. 910726Superfamily a.25.1: Ferritin-like [47240] (10 families) (S)
    contains bimetal-ion centre in the middle of the bundle
  5. 911704Family a.25.1.2: Ribonucleotide reductase-like [47253] (9 proteins)
  6. 911990Protein automated matches [190435] (4 species)
    not a true protein

Species:

  1. 911991Castor bean (Ricinus communis) [TaxId:3988] [187330] (1 PDB entry)
  2. 911998Escherichia coli [TaxId:511145] [189613] (6 PDB entries)
    1. Domains for 3pvr:
      1. 912001Domain d3pvrb_: 3pvr B: [184015]
        automated match to d1otka_
        complexed with byc, gol
      2. 912002Domain d3pvrc_: 3pvr C: [184016]
        automated match to d1otka_
        complexed with byc, gol
    2. Domains for 3pvt:
      1. 911999Domain d3pvtb_: 3pvt B: [184017]
        automated match to d1otka_
        complexed with 3hc, gol
      2. 912000Domain d3pvtc_: 3pvt C: [184018]
        automated match to d1otka_
        complexed with 3hc, gol
    3. Domains for 3pvy:
      1. 912003Domain d3pvyb_: 3pvy B: [184023]
        automated match to d1otka_
        complexed with coa, gol
      2. 912004Domain d3pvyc_: 3pvy C: [184024]
        automated match to d1otka_
        complexed with coa, gol
    4. Domains for 3pw1:
      1. 912005Domain d3pw1b_: 3pw1 B: [184025]
        automated match to d1otka_
        complexed with faq, gol
      2. 912006Domain d3pw1c_: 3pw1 C: [184026]
        automated match to d1otka_
        complexed with faq, gol
    5. Domains for 3pw8:
      1. 912015Domain d3pw8a_: 3pw8 A: [184027]
        automated match to d1otka_
        complexed with aco
      2. 912016Domain d3pw8b_: 3pw8 B: [184028]
        automated match to d1otka_
        complexed with aco
    6. Domains for 3pwq:
      1. 912007Domain d3pwqa_: 3pwq A: [184043]
        automated match to d1otka_
      2. 912008Domain d3pwqb_: 3pwq B: [184044]
        automated match to d1otka_
      3. 912009Domain d3pwqe_: 3pwq E: [184045]
        automated match to d1otka_
      4. 912010Domain d3pwqg_: 3pwq G: [184046]
        automated match to d1otka_
      5. 912011Domain d3pwqi_: 3pwq I: [184047]
        automated match to d1otka_
      6. 912012Domain d3pwqj_: 3pwq J: [184048]
        automated match to d1otka_
      7. 912013Domain d3pwqk_: 3pwq K: [184049]
        automated match to d1otka_
      8. 912014Domain d3pwqr_: 3pwq R: [184050]
        automated match to d1otka_
  3. 912017Hedera helix [TaxId:4052] [187347] (1 PDB entry)
  4. 912020Pseudomonas mendocina [TaxId:300] [188695] (12 PDB entries)
    1. Domains for 3dhg:
      1. 912026Domain d3dhga_: 3dhg A: [173940]
        Other proteins in same PDB: d3dhgc_, d3dhgf_
        automated match to d1t0qa_
        complexed with azi, ca, fe
      2. 912027Domain d3dhgd_: 3dhg D: [173942]
        Other proteins in same PDB: d3dhgc_, d3dhgf_
        automated match to d1t0qa_
        complexed with azi, ca, fe
    2. Domain for 3dhh:
    3. Domain for 3dhi:
    4. Domain for 3ge3:
    5. Domains for 3ge8:
      1. 912032Domain d3ge8a_: 3ge8 A: [176570]
        Other proteins in same PDB: d3ge8c_, d3ge8e_, d3ge8g_, d3ge8h_
        automated match to d1t0qa_
        complexed with act, fe
      2. 912033Domain d3ge8d_: 3ge8 D: [176572]
        Other proteins in same PDB: d3ge8c_, d3ge8e_, d3ge8g_, d3ge8h_
        automated match to d1t0qa_
        complexed with act, fe
    6. Domain for 3i5j:
    7. Domain for 3i63:
    8. Domain for 3q14:
    9. Domain for 3q2a:
    10. Domains for 3q3m:
      1. 912023Domain d3q3ma_: 3q3m A: [184186]
        Other proteins in same PDB: d3q3mc_, d3q3me_, d3q3mg_, d3q3mh_
        automated match to d1t0qa_
        complexed with fe, z82
      2. 912024Domain d3q3md_: 3q3m D: [184188]
        Other proteins in same PDB: d3q3mc_, d3q3me_, d3q3mg_, d3q3mh_
        automated match to d1t0qa_
        complexed with fe, z82
    11. Domain for 3q3n:
    12. Domain for 3q3o:

More info for Protein automated matches from a.25.1.2: Ribonucleotide reductase-like

Timeline for Protein automated matches from a.25.1.2: Ribonucleotide reductase-like: