Species:

1. Castor bean (Ricinus communis) [TaxId:3988] [187330] (3 PDB entries)

   1. Domains for 2j2f:

      1. Domain d2j2fa_: 2j2f A: [165816] automated match to d1oq4a_ complexed with fe; mutant

      2. Domain d2j2fb_: 2j2f B: [165817] automated match to d1oq4a_ complexed with fe; mutant

      3. Domain d2j2fc_: 2j2f C: [165818] automated match to d1oq4a_ complexed with fe; mutant

      4. Domain d2j2fd_: 2j2f D: [165819] automated match to d1oq4a_ complexed with fe; mutant

      5. Domain d2j2fe_: 2j2f E: [165820] automated match to d1oq4a_ complexed with fe; mutant

      6. Domain d2j2ff_: 2j2f F: [165821] automated match to d1oq4a_ complexed with fe; mutant

   2. Domains for 2xz0:

      1. Domain d2xz0a_: 2xz0 A: [244642] Other proteins in same PDB: d2xz0d_ automated match to d2j2fa_ complexed with edo, fe, zn

      2. Domain d2xz0b_: 2xz0 B: [244643] Other proteins in same PDB: d2xz0d_ automated match to d2j2fa_ complexed with edo, fe, zn

      3. Domain d2xz0c_: 2xz0 C: [244644] Other proteins in same PDB: d2xz0d_ automated match to d2j2fa_ complexed with edo, fe, zn

   3. Domains for 4v0j:

      1. Domain d4v0ja_: 4v0j A: [276364] automated match to d2uw1b_ complexed with fe2, gol; mutant

      2. Domain d4v0jb_: 4v0j B: [276365] automated match to d2uw1b_ complexed with fe2, gol; mutant

      3. Domain d4v0jc_: 4v0j C: [276366] automated match to d2uw1b_ complexed with fe2, gol; mutant

      4. Domain d4v0jd_: 4v0j D: [276373] automated match to d2uw1b_ complexed with fe2, gol; mutant

      5. Domain d4v0je_: 4v0j E: [276374] automated match to d2uw1b_ complexed with fe2, gol; mutant

      6. Domain d4v0jf_: 4v0j F: [276367] automated match to d2uw1b_ complexed with fe2, gol; mutant

2. Chlamydia trachomatis [TaxId:813] [225098] (5 PDB entries)

   1. Domain for 2ani:

      • Domain d2ania_: 2ani A: [203477] automated match to d1syya_ complexed with fe, pb; mutant

   2. Domains for 4d8f:

      1. Domain d4d8fa1: 4d8f A:1-320 [251381] Other proteins in same PDB: d4d8fa2, d4d8fb2, d4d8fc2, d4d8fd2 automated match to d2ania_ complexed with acy, fe, mn

      2. Domain d4d8fb1: 4d8f B:1-324 [251382] Other proteins in same PDB: d4d8fa2, d4d8fb2, d4d8fc2, d4d8fd2 automated match to d2ania_ complexed with acy, fe, mn

      3. Domain d4d8fc1: 4d8f C:1-318 [251383] Other proteins in same PDB: d4d8fa2, d4d8fb2, d4d8fc2, d4d8fd2 automated match to d2ania_ complexed with acy, fe, mn

      4. Domain d4d8fd1: 4d8f D:1-328 [251384] Other proteins in same PDB: d4d8fa2, d4d8fb2, d4d8fc2, d4d8fd2 automated match to d2ania_ complexed with acy, fe, mn

   3. Domains for 4d8g:

      1. Domain d4d8ga1: 4d8g A:1-318 [251385] Other proteins in same PDB: d4d8ga2, d4d8gb2, d4d8gc2, d4d8gd2 automated match to d2ania_ complexed with fe, mn

      2. Domain d4d8gb1: 4d8g B:1-324 [251386] Other proteins in same PDB: d4d8ga2, d4d8gb2, d4d8gc2, d4d8gd2 automated match to d2ania_ complexed with fe, mn

      3. Domain d4d8gc1: 4d8g C:1-318 [251387] Other proteins in same PDB: d4d8ga2, d4d8gb2, d4d8gc2, d4d8gd2 automated match to d2ania_ complexed with fe, mn

      4. Domain d4d8gd1: 4d8g D:1-329 [251388] Other proteins in same PDB: d4d8ga2, d4d8gb2, d4d8gc2, d4d8gd2 automated match to d2ania_ complexed with fe, mn

   4. Domains for 4m1h:

      1. Domain d4m1ha1: 4m1h A:1-322 [253727] Other proteins in same PDB: d4m1ha2, d4m1hb2, d4m1hc2, d4m1hd2 automated match to d2ania_

      2. Domain d4m1hb1: 4m1h B:1-328 [253728] Other proteins in same PDB: d4m1ha2, d4m1hb2, d4m1hc2, d4m1hd2 automated match to d2ania_

      3. Domain d4m1hc1: 4m1h C:1-329 [253729] Other proteins in same PDB: d4m1ha2, d4m1hb2, d4m1hc2, d4m1hd2 automated match to d2ania_

      4. Domain d4m1hd1: 4m1h D:1-328 [253730] Other proteins in same PDB: d4m1ha2, d4m1hb2, d4m1hc2, d4m1hd2 automated match to d2ania_

   5. Domains for 4m1i:

      1. Domain d4m1ia1: 4m1i A:1-327 [253731] Other proteins in same PDB: d4m1ia2, d4m1ib2, d4m1ic2, d4m1id2 automated match to d2ania_ complexed with acy, fe, mn, p6g

      2. Domain d4m1ib1: 4m1i B:1-320 [253732] Other proteins in same PDB: d4m1ia2, d4m1ib2, d4m1ic2, d4m1id2 automated match to d2ania_ complexed with acy, fe, mn, p6g

      3. Domain d4m1ic1: 4m1i C:1-327 [253733] Other proteins in same PDB: d4m1ia2, d4m1ib2, d4m1ic2, d4m1id2 automated match to d2ania_ complexed with acy, fe, mn, p6g

      4. Domain d4m1id1: 4m1i D:1-328 [253734] Other proteins in same PDB: d4m1ia2, d4m1ib2, d4m1ic2, d4m1id2 automated match to d2ania_ complexed with acy, fe, mn, p6g

3. Escherichia coli K-12 [TaxId:83333] [255975] (6 PDB entries)

   1. Domain for 3n37:

      • Domain d3n37a_: 3n37 A: [247843] automated match to d1uzrb_ complexed with gol, mn

   2. Domain for 3n38:

      • Domain d3n38a_: 3n38 A: [247844] automated match to d1uzrb_ complexed with fe2

   3. Domains for 3n39:

      1. Domain d3n39a_: 3n39 A: [247845] automated match to d1uzrb_ complexed with fmn, mn

      2. Domain d3n39b_: 3n39 B: [247846] automated match to d1uzrb_ complexed with fmn, mn

   4. Domains for 3n3a:

      1. Domain d3n3aa_: 3n3a A: [247847] automated match to d1uzrb_ complexed with fmn, mn

      2. Domain d3n3ab_: 3n3a B: [247848] automated match to d1uzrb_ complexed with fmn, mn

   5. Domains for 3n3b:

      1. Domain d3n3ba_: 3n3b A: [247849] automated match to d1uzrb_ complexed with fmn, mn, peo

      2. Domain d3n3bb_: 3n3b B: [247850] automated match to d1uzrb_ complexed with fmn, mn, peo

   6. Domain for 4m1f:

      • Domain d4m1fa_: 4m1f A: [253726] automated match to d1uzrb_

4. Escherichia coli [TaxId:511145] [189613] (7 PDB entries)

   1. Domains for 3pvr:

      1. Domain d3pvrb1: 3pvr B:2-236 [184015] Other proteins in same PDB: d3pvrb2, d3pvrc2 automated match to d1otka_ complexed with byc, gol

      2. Domain d3pvrc1: 3pvr C:2-248 [184016] Other proteins in same PDB: d3pvrb2, d3pvrc2 automated match to d1otka_ complexed with byc, gol

   2. Domains for 3pvt:

      1. Domain d3pvtb1: 3pvt B:2-237 [184017] Other proteins in same PDB: d3pvtb2, d3pvtc2 automated match to d1otka_ complexed with 3hc, gol

      2. Domain d3pvtc1: 3pvt C:2-248 [184018] Other proteins in same PDB: d3pvtb2, d3pvtc2 automated match to d1otka_ complexed with 3hc, gol

   3. Domains for 3pvy:

      1. Domain d3pvyb1: 3pvy B:2-238 [184023] Other proteins in same PDB: d3pvyb2, d3pvyc2 automated match to d1otka_ complexed with coa, gol

      2. Domain d3pvyc1: 3pvy C:2-248 [184024] Other proteins in same PDB: d3pvyb2, d3pvyc2 automated match to d1otka_ complexed with coa, gol

   4. Domains for 3pw1:

      1. Domain d3pw1b1: 3pw1 B:2-237 [184025] Other proteins in same PDB: d3pw1b2, d3pw1c2 automated match to d1otka_ complexed with faq, gol

      2. Domain d3pw1c1: 3pw1 C:2-248 [184026] Other proteins in same PDB: d3pw1b2, d3pw1c2 automated match to d1otka_ complexed with faq, gol

   5. Domains for 3pw8:

      1. Domain d3pw8a_: 3pw8 A: [184027] automated match to d1otka_ complexed with aco

      2. Domain d3pw8b_: 3pw8 B: [184028] automated match to d1otka_ complexed with aco

   6. Domains for 3pwq:

      1. Domain d3pwqa1: 3pwq A:2-248 [184043] Other proteins in same PDB: d3pwqa2, d3pwqb2, d3pwqe2, d3pwqg2, d3pwqi2, d3pwqj2, d3pwqr2 automated match to d1otka_

      2. Domain d3pwqb1: 3pwq B:2-248 [184044] Other proteins in same PDB: d3pwqa2, d3pwqb2, d3pwqe2, d3pwqg2, d3pwqi2, d3pwqj2, d3pwqr2 automated match to d1otka_

      3. Domain d3pwqe1: 3pwq E:2-248 [184045] Other proteins in same PDB: d3pwqa2, d3pwqb2, d3pwqe2, d3pwqg2, d3pwqi2, d3pwqj2, d3pwqr2 automated match to d1otka_

      4. Domain d3pwqg1: 3pwq G:2-248 [184046] Other proteins in same PDB: d3pwqa2, d3pwqb2, d3pwqe2, d3pwqg2, d3pwqi2, d3pwqj2, d3pwqr2 automated match to d1otka_

      5. Domain d3pwqi1: 3pwq I:2-238 [184047] Other proteins in same PDB: d3pwqa2, d3pwqb2, d3pwqe2, d3pwqg2, d3pwqi2, d3pwqj2, d3pwqr2 automated match to d1otka_

      6. Domain d3pwqj1: 3pwq J:2-238 [184048] Other proteins in same PDB: d3pwqa2, d3pwqb2, d3pwqe2, d3pwqg2, d3pwqi2, d3pwqj2, d3pwqr2 automated match to d1otka_

      7. Domain d3pwqk_: 3pwq K: [184049] Other proteins in same PDB: d3pwqa2, d3pwqb2, d3pwqe2, d3pwqg2, d3pwqi2, d3pwqj2, d3pwqr2 automated match to d1otka_

      8. Domain d3pwqr1: 3pwq R:2-238 [184050] Other proteins in same PDB: d3pwqa2, d3pwqb2, d3pwqe2, d3pwqg2, d3pwqi2, d3pwqj2, d3pwqr2 automated match to d1otka_

   7. Domains for 4ii4:

      1. Domain d4ii4b1: 4ii4 B:2-239 [259066] Other proteins in same PDB: d4ii4b2, d4ii4c2 automated match to d3pvtc_ complexed with byc; mutant

      2. Domain d4ii4c1: 4ii4 C:2-248 [262722] Other proteins in same PDB: d4ii4b2, d4ii4c2 automated match to d3pvtc_ complexed with byc; mutant

5. Escherichia coli [TaxId:83334] [318744] (2 PDB entries)

   1. Domain for 5ci2:

      • Domain d5ci2a_: 5ci2 A: [318745] automated match to d1jqcb_ complexed with feo, so4

   2. Domain for 5ci3:

      • Domain d5ci3a_: 5ci3 A: [319519] automated match to d1jqcb_ complexed with feo, so4

6. Hedera helix [TaxId:4052] [187347] (1 PDB entry)

   • Domains for 2uw1:

     1. Domain d2uw1a_: 2uw1 A: [168185] automated match to d1afra_ complexed with fe, gvm, na

     2. Domain d2uw1b_: 2uw1 B: [168186] automated match to d1afra_ complexed with fe, gvm, na

7. Human (Homo sapiens) [TaxId:9606] [193902] (7 PDB entries)

   1. Domain for 2iyh:

      • Domain d2iyha_: 2iyh A: [304087] automated match to d1h0oa_ complexed with fe

   2. Domain for 3hf1:

      • Domain d3hf1b_: 3hf1 B: [246493] automated match to d1smsa_ complexed with fe, so4

   3. Domains for 3olj:

      1. Domain d3olja1: 3olj A:66-350 [200095] Other proteins in same PDB: d3olja2, d3oljb2, d3oljc2, d3oljd2 automated match to d3oljd_ complexed with na

      2. Domain d3oljb1: 3olj B:66-350 [200096] Other proteins in same PDB: d3olja2, d3oljb2, d3oljc2, d3oljd2 automated match to d3oljd_ complexed with na

      3. Domain d3oljc1: 3olj C:66-350 [200097] Other proteins in same PDB: d3olja2, d3oljb2, d3oljc2, d3oljd2 automated match to d3oljd_ complexed with na

      4. Domain d3oljd1: 3olj D:66-350 [196199] Other proteins in same PDB: d3olja2, d3oljb2, d3oljc2, d3oljd2 automated match to d2uw2a1 complexed with na

   4. Domains for 3vpm:

      1. Domain d3vpma1: 3vpm A:66-350 [201251] Other proteins in same PDB: d3vpma2, d3vpmb2 automated match to d3vpmb_ complexed with fe, mg; mutant

      2. Domain d3vpmb1: 3vpm B:66-350 [193903] Other proteins in same PDB: d3vpma2, d3vpmb2 automated match to d2uw2a1 complexed with fe, mg; mutant

   5. Domains for 3vpn:

      1. Domain d3vpna1: 3vpn A:66-350 [201252] Other proteins in same PDB: d3vpna2, d3vpnb2 automated match to d3vpnb_ complexed with fe, mg; mutant

      2. Domain d3vpnb1: 3vpn B:66-350 [193905] Other proteins in same PDB: d3vpna2, d3vpnb2 automated match to d2uw2a1 complexed with fe, mg; mutant

   6. Domains for 3vpo:

      1. Domain d3vpoa1: 3vpo A:66-350 [201253] Other proteins in same PDB: d3vpoa2, d3vpob2 automated match to d3vpob_ complexed with fe, mg; mutant

      2. Domain d3vpob1: 3vpo B:66-350 [193904] Other proteins in same PDB: d3vpoa2, d3vpob2 automated match to d2uw2a1 complexed with fe, mg; mutant

   7. Domains for 4djn:

      1. Domain d4djna_: 4djn A: [195471] automated match to d2uw2a1 complexed with edo, so4

      2. Domain d4djnb_: 4djn B: [195470] automated match to d2uw2a1 complexed with edo, so4

8. Methylococcus capsulatus [TaxId:243233] [226584] (1 PDB entry)

   • Domains for 4gam:

     1. Domain d4gama_: 4gam A: [202222] Other proteins in same PDB: d4gamb_, d4gamc_, d4gamd_, d4gamg_, d4gamh_, d4gami_, d4gaml_, d4gamm_, d4gamn_, d4gamq_, d4gamr_, d4gams_ automated match to d1fz1a_ complexed with fe

     2. Domain d4gamf_: 4gam F: [202226] Other proteins in same PDB: d4gamb_, d4gamc_, d4gamd_, d4gamg_, d4gamh_, d4gami_, d4gaml_, d4gamm_, d4gamn_, d4gamq_, d4gamr_, d4gams_ automated match to d1fz1a_ complexed with fe

     3. Domain d4gamk_: 4gam K: [202230] Other proteins in same PDB: d4gamb_, d4gamc_, d4gamd_, d4gamg_, d4gamh_, d4gami_, d4gaml_, d4gamm_, d4gamn_, d4gamq_, d4gamr_, d4gams_ automated match to d1fz1a_ complexed with fe

     4. Domain d4gamp_: 4gam P: [202234] Other proteins in same PDB: d4gamb_, d4gamc_, d4gamd_, d4gamg_, d4gamh_, d4gami_, d4gaml_, d4gamm_, d4gamn_, d4gamq_, d4gamr_, d4gams_ automated match to d1fz1a_ complexed with fe

9. Plasmodium vivax [TaxId:5855] [226817] (1 PDB entry)

   • Domains for 2o1z:

     1. Domain d2o1za_: 2o1z A: [205205] automated match to d4djnb_ complexed with fe, unx

     2. Domain d2o1zb_: 2o1z B: [205206] automated match to d4djnb_ complexed with fe, unx

10. Pseudomonas mendocina [TaxId:300] [188695] (20 PDB entries)

    1. Domains for 3dhg:

       1. Domain d3dhga_: 3dhg A: [173940] Other proteins in same PDB: d3dhgc_, d3dhgf_ automated match to d1t0qa_ complexed with azi, ca, fe

       2. Domain d3dhgd_: 3dhg D: [173942] Other proteins in same PDB: d3dhgc_, d3dhgf_ automated match to d1t0qa_ complexed with azi, ca, fe

    2. Domain for 3dhh:

       • Domain d3dhha_: 3dhh A: [173944] Other proteins in same PDB: d3dhhc_, d3dhhe_ automated match to d1t0qa_ complexed with 1pe, bml, btb, cl, fe

    3. Domain for 3dhi:

       • Domain d3dhia_: 3dhi A: [173947] Other proteins in same PDB: d3dhic_, d3dhie_ automated match to d1t0qa_ complexed with 1pe, act, btb, fe

    4. Domain for 3ge3:

       • Domain d3ge3a_: 3ge3 A: [176552] Other proteins in same PDB: d3ge3c_, d3ge3e_ automated match to d1t0qa_ complexed with act, cl, fe; mutant

    5. Domains for 3ge8:

       1. Domain d3ge8a_: 3ge8 A: [176570] Other proteins in same PDB: d3ge8c_, d3ge8e_, d3ge8g_, d3ge8h_ automated match to d1t0qa_ complexed with act, fe

       2. Domain d3ge8d_: 3ge8 D: [176572] Other proteins in same PDB: d3ge8c_, d3ge8e_, d3ge8g_, d3ge8h_ automated match to d1t0qa_ complexed with act, fe

    6. Domain for 3i5j:

       • Domain d3i5ja_: 3i5j A: [178096] Other proteins in same PDB: d3i5jc_, d3i5je_ automated match to d1t0qa_ complexed with fe

    7. Domain for 3i63:

       • Domain d3i63a_: 3i63 A: [178105] Other proteins in same PDB: d3i63c_, d3i63e_ automated match to d1t0qa_ complexed with fe, peo

    8. Domain for 3q14:

       • Domain d3q14a_: 3q14 A: [184143] Other proteins in same PDB: d3q14c_, d3q14e_ automated match to d1t0qa_ complexed with fe, pcr

    9. Domain for 3q2a:

       • Domain d3q2aa_: 3q2a A: [184167] Other proteins in same PDB: d3q2ac_, d3q2ae_ automated match to d1t0qa_ complexed with ete, fe, p6g, pab

    10. Domains for 3q3m:

        1. Domain d3q3ma_: 3q3m A: [184186] Other proteins in same PDB: d3q3mc_, d3q3me_, d3q3mg_, d3q3mh_ automated match to d1t0qa_ complexed with fe, z82

        2. Domain d3q3md_: 3q3m D: [184188] Other proteins in same PDB: d3q3mc_, d3q3me_, d3q3mg_, d3q3mh_ automated match to d1t0qa_ complexed with fe, z82

    11. Domain for 3q3n:

        • Domain d3q3na_: 3q3n A: [184192] Other proteins in same PDB: d3q3nc_, d3q3ne_ automated match to d1t0qa_ complexed with 1pe, fe, npo

    12. Domain for 3q3o:

        • Domain d3q3oa_: 3q3o A: [184195] Other proteins in same PDB: d3q3oc_, d3q3oe_ automated match to d1t0qa_ complexed with 1pe, fe, iph

    13. Domain for 3ri7:

        • Domain d3ri7a_: 3ri7 A: [196051] Other proteins in same PDB: d3ri7c_, d3ri7e_ automated match to d3dhgd_ complexed with act, fe; mutant

    14. Domains for 3rmk:

        1. Domain d3rmka_: 3rmk A: [196049] Other proteins in same PDB: d3rmkc_, d3rmkf_ automated match to d3dhgd_ complexed with bml, ca, fe, pge

        2. Domain d3rmkd_: 3rmk D: [200499] Other proteins in same PDB: d3rmkc_, d3rmkf_ automated match to d3rmka_ complexed with bml, ca, fe, pge

    15. Domains for 4p1b:

        1. Domain d4p1ba_: 4p1b A: [263408] Other proteins in same PDB: d4p1bc_, d4p1bf_, d4p1bh_, d4p1bi_ automated match to d3ge8d_ complexed with act, fe, fes, na, peg

        2. Domain d4p1bd_: 4p1b D: [263410] Other proteins in same PDB: d4p1bc_, d4p1bf_, d4p1bh_, d4p1bi_ automated match to d3ge8d_ complexed with act, fe, fes, na, peg

    16. Domains for 4p1c:

        1. Domain d4p1ca_: 4p1c A: [260212] Other proteins in same PDB: d4p1cc_, d4p1cf_, d4p1ch_, d4p1ci_ automated match to d3ge8d_ complexed with fe, fes, peg

        2. Domain d4p1cd_: 4p1c D: [259897] Other proteins in same PDB: d4p1cc_, d4p1cf_, d4p1ch_, d4p1ci_ automated match to d3ge8d_ complexed with fe, fes, peg

    17. Domains for 5tds:

        1. Domain d5tdsa_: 5tds A: [332212] Other proteins in same PDB: d5tdsc_, d5tdsf_ automated match to d3dhgd_ complexed with cl, fe, mbn, mg

        2. Domain d5tdsd_: 5tds D: [332094] Other proteins in same PDB: d5tdsc_, d5tdsf_ automated match to d3dhgd_ complexed with cl, fe, mbn, mg

    18. Domains for 5tdt:

        1. Domain d5tdta_: 5tdt A: [332088] Other proteins in same PDB: d5tdtc_, d5tdte_, d5tdtg_, d5tdth_ automated match to d3dhgd_ complexed with fe, mbn, per

        2. Domain d5tdtd_: 5tdt D: [332092] Other proteins in same PDB: d5tdtc_, d5tdte_, d5tdtg_, d5tdth_ automated match to d3dhgd_ complexed with fe, mbn, per

    19. Domain for 5tdu:

        • Domain d5tdua_: 5tdu A: [332171] Other proteins in same PDB: d5tduc_, d5tdue_ automated match to d3dhgd_ complexed with fe, pcr

    20. Domains for 5tdv:

        1. Domain d5tdva_: 5tdv A: [332093] Other proteins in same PDB: d5tdvc_, d5tdve_, d5tdvg_, d5tdvh_ automated match to d3dhia_ complexed with fe, per

        2. Domain d5tdvd_: 5tdv D: [332101] Other proteins in same PDB: d5tdvc_, d5tdve_, d5tdvg_, d5tdvh_ automated match to d3dhia_ complexed with fe, per

More info for Protein automated matches from a.25.1.2: Ribonucleotide reductase-like

Timeline for Protein automated matches from a.25.1.2: Ribonucleotide reductase-like:

• Protein automated matches from a.25.1.2: Ribonucleotide reductase-like first appeared in SCOPe 2.01
  
• Protein automated matches from a.25.1.2: Ribonucleotide reductase-like appears in SCOPe 2.06