SCOPe 2.05: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.05
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.101: Undecaprenyl diphosphate synthase [64004] (1 superfamily)
3 layers: a/b/a; parallel beta-sheet of 6 strands, order 342156
Superfamily c.101.1: Undecaprenyl diphosphate synthase [64005] (2 families)
the sheet topology is similar to those of the N-terminal domain of phosphoglycerate kinase and carbamate kinase
Family c.101.1.0: automated matches [191361] (1 protein)
not a true family
Protein automated matches [190431] (4 species)
not a true protein

Species:

Campylobacter jejuni [TaxId:197] [189831] (1 PDB entry)
- Domains for 3ugs:
  1. Domain d3ugsa_: 3ugs A: [186256]
    automated match to d1uehb_
    complexed with fft
  2. Domain d3ugsb_: 3ugs B: [186257]
    automated match to d1uehb_
    complexed with fft
Helicobacter pylori [TaxId:210] [187325] (2 PDB entries)
1. Domains for 2d2r:
  1. Domain d2d2ra_: 2d2r A: [163563]
    automated match to d1uehb_
  2. Domain d2d2rb_: 2d2r B: [163564]
    automated match to d1uehb_
2. Domains for 2dtn:
  1. Domain d2dtna_: 2dtn A: [163691]
    automated match to d1uehb_
    complexed with dpo
  2. Domain d2dtnb_: 2dtn B: [163692]
    automated match to d1uehb_
    complexed with dpo
Mycobacterium tuberculosis [TaxId:1773] [188255] (3 PDB entries)
1. Domains for 2vfw:
  1. Domain d2vfwa_: 2vfw A: [168522]
    automated match to d1f75a_
    complexed with so4
  2. Domain d2vfwb_: 2vfw B: [168523]
    automated match to d1f75a_
    complexed with so4
2. Domains for 2vg0:
  1. Domain d2vg0a_: 2vg0 A: [168536]
    automated match to d1f75a_
    complexed with gol, gpp
  2. Domain d2vg0b_: 2vg0 B: [168537]
    automated match to d1f75a_
    complexed with gol, gpp
3. Domains for 2vg1:
  1. Domain d2vg1a_: 2vg1 A: [168538]
    automated match to d1f75a_
    complexed with fpp, gol, po4
  2. Domain d2vg1b_: 2vg1 B: [168539]
    automated match to d1f75a_
    complexed with fpp, gol, po4
Streptococcus pneumoniae [TaxId:171101] [260378] (2 PDB entries)
1. Domains for 4q9m:
  1. Domain d4q9ma_: 4q9m A: [267278]
    automated match to d4q9oa_
    complexed with 2zw, cd, fpp
  2. Domain d4q9mb_: 4q9m B: [267279]
    automated match to d4q9oa_
    complexed with 2zw, cd, fpp
2. Domains for 4q9o:
  1. Domain d4q9oa_: 4q9o A: [260379]
    automated match to d4h8ea_
    complexed with 2zw, so4
  2. Domain d4q9ob_: 4q9o B: [263660]
    automated match to d4q9oa_
    complexed with 2zw, so4

More info for Protein automated matches from c.101.1.0: automated matches

Timeline for Protein automated matches from c.101.1.0: automated matches:

Protein automated matches from c.101.1.0: automated matches first appeared in SCOPe 2.01
Protein automated matches from c.101.1.0: automated matches appears in SCOPe 2.04
Protein automated matches from c.101.1.0: automated matches appears in SCOPe 2.06
Protein automated matches from c.101.1.0: automated matches appears in the current release, SCOPe 2.08