SCOPe 2.06: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.06
Class b: All beta proteins [48724] (177 folds)
Fold b.3: Prealbumin-like [49451] (7 superfamilies)
sandwich; 7 strands in 2 sheets, greek-key
variations: some members have additional 1-2 strands to common fold
Superfamily b.3.4: Transthyretin (synonym: prealbumin) [49472] (2 families)
Family b.3.4.1: Transthyretin (synonym: prealbumin) [49473] (2 proteins)
automatically mapped to Pfam PF00576
Protein automated matches [190376] (1 species)
not a true protein

Species:

Human (Homo sapiens) [TaxId:9606] [187223] (17 PDB entries)
1. Domains for 3did:
  1. Domain d3dida_: 3did A: [157745]
    automated match to d1eta1_
    complexed with act, gol, zn; mutant
  2. Domain d3didb_: 3did B: [157746]
    automated match to d1eta1_
    complexed with act, gol, zn; mutant
  3. Domain d3didc_: 3did C: [157747]
    automated match to d1eta1_
    complexed with act, gol, zn; mutant
  4. Domain d3didd_: 3did D: [157748]
    automated match to d1eta1_
    complexed with act, gol, zn; mutant
2. Domains for 3i9p:
  1. Domain d3i9pa_: 3i9p A: [178186]
    automated match to d1bzda_
  2. Domain d3i9pb_: 3i9p B: [178187]
    automated match to d1bzda_
3. Domains for 4ac2:
  1. Domain d4ac2a_: 4ac2 A: [194654]
    automated match to d1ttaa_
    complexed with 43f
  2. Domain d4ac2b_: 4ac2 B: [194653]
    automated match to d1ttaa_
    complexed with 43f
4. Domains for 4ank:
  1. Domain d4anka_: 4ank A: [219079]
    automated match to d1tlma_
  2. Domain d4ankb_: 4ank B: [219080]
    automated match to d1tlma_
5. Domains for 4pme:
  1. Domain d4pmea_: 4pme A: [260221]
    automated match to d2roya_
    complexed with cur, edo, fer, na
  2. Domain d4pmeb_: 4pme B: [260738]
    automated match to d2roya_
    complexed with cur, edo, fer, na
6. Domain for 5a6i:
  - Domain d5a6ia_: 5a6i A: [313087]
    automated match to d1ttaa_
    complexed with tcw
7. Domains for 5dej:
  1. Domain d5deja_: 5dej A: [321893]
    automated match to d5ezpe_
    complexed with ca; mutant
  2. Domain d5dejb_: 5dej B: [321877]
    automated match to d5ezpe_
    complexed with ca; mutant
8. Domains for 5e4a:
  1. Domain d5e4aa_: 5e4a A: [313538]
    automated match to d1ttaa_
    complexed with 5jw
  2. Domain d5e4ab_: 5e4a B: [313561]
    automated match to d1ttaa_
    complexed with 5jw
9. Domains for 5e4o:
  1. Domain d5e4oa_: 5e4o A: [313525]
    automated match to d2roya_
    complexed with l57
  2. Domain d5e4ob_: 5e4o B: [313526]
    automated match to d2roya_
    complexed with l57
10. Domains for 5ezp:
  1. Domain d5ezpa_: 5ezp A: [313858]
    automated match to d1ttaa_
    complexed with edo, ipj
  2. Domain d5ezpb_: 5ezp B: [313960]
    automated match to d1ttaa_
    complexed with edo, ipj
  3. Domain d5ezpc_: 5ezp C: [313866]
    automated match to d1ttaa_
    complexed with edo, ipj
  4. Domain d5ezpd_: 5ezp D: [313836]
    automated match to d1ttaa_
    complexed with edo, ipj
  5. Domain d5ezpe_: 5ezp E: [313828]
    automated match to d1ttaa_
    complexed with edo, ipj
  6. Domain d5ezpf_: 5ezp F: [313830]
    automated match to d1ttaa_
    complexed with edo, ipj
  7. Domain d5ezpg_: 5ezp G: [313881]
    automated match to d1ttaa_
    complexed with edo, ipj
  8. Domain d5ezph_: 5ezp H: [313875]
    automated match to d1ttaa_
    complexed with edo, ipj
11. Domains for 5h0v:
  1. Domain d5h0va1: 5h0v A:11-124 [335338]
    Other proteins in same PDB: d5h0va2, d5h0vb2, d5h0vc2, d5h0vd2
    automated match to d5ezpe_
    complexed with mg, mpd
  2. Domain d5h0vb1: 5h0v B:11-124 [335337]
    Other proteins in same PDB: d5h0va2, d5h0vb2, d5h0vc2, d5h0vd2
    automated match to d5ezpe_
    complexed with mg, mpd
  3. Domain d5h0vc1: 5h0v C:11-124 [335342]
    Other proteins in same PDB: d5h0va2, d5h0vb2, d5h0vc2, d5h0vd2
    automated match to d5ezpe_
    complexed with mg, mpd
  4. Domain d5h0vd1: 5h0v D:11-125 [335344]
    Other proteins in same PDB: d5h0va2, d5h0vb2, d5h0vc2, d5h0vd2
    automated match to d5ezpe_
    complexed with mg, mpd
12. Domain for 5h0w:
  - Domain d5h0wa1: 5h0w A:11-124 [335343]
    Other proteins in same PDB: d5h0wa2
    automated match to d5ezpe_
    complexed with so4
13. Domains for 5h0x:
  1. Domain d5h0xa1: 5h0x A:11-124 [335421]
    Other proteins in same PDB: d5h0xa2, d5h0xb2
    automated match to d5ezpe_
  2. Domain d5h0xb1: 5h0x B:11-124 [335410]
    Other proteins in same PDB: d5h0xa2, d5h0xb2
    automated match to d5ezpe_
14. Domain for 5h0y:
  - Domain d5h0ya1: 5h0y A:11-124 [335404]
    Other proteins in same PDB: d5h0ya2
    automated match to d5ezpe_
    complexed with cl, so4
15. Domain for 5h0z:
  - Domain d5h0za1: 5h0z A:11-124 [335543]
    Other proteins in same PDB: d5h0za2
    automated match to d5ezpe_
    complexed with cl, so4
16. Domains for 5k1j:
  1. Domain d5k1ja_: 5k1j A: [319856]
    automated match to d5ezpe_
    complexed with act, dms, edo, imd, re
  2. Domain d5k1jb_: 5k1j B: [319791]
    automated match to d5ezpe_
    complexed with act, dms, edo, imd, re
17. Domains for 5k1n:
  1. Domain d5k1na_: 5k1n A: [319805]
    automated match to d5ezpe_
    complexed with act, dms, edo, imd, peg, re
  2. Domain d5k1nb_: 5k1n B: [319800]
    automated match to d5ezpe_
    complexed with act, dms, edo, imd, peg, re

More info for Protein automated matches from b.3.4.1: Transthyretin (synonym: prealbumin)

Timeline for Protein automated matches from b.3.4.1: Transthyretin (synonym: prealbumin):

Protein automated matches from b.3.4.1: Transthyretin (synonym: prealbumin) first appeared in SCOPe 2.01
Protein automated matches from b.3.4.1: Transthyretin (synonym: prealbumin) appears in SCOPe 2.05
Protein automated matches from b.3.4.1: Transthyretin (synonym: prealbumin) appears in SCOPe 2.07
Protein automated matches from b.3.4.1: Transthyretin (synonym: prealbumin) appears in the current release, SCOPe 2.08