Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2316812Fold a.29: Bromodomain-like [47363] (15 superfamilies)
    4 helices; bundle; minor mirror variant of up-and-down topology
  4. 2316813Superfamily a.29.2: Bromodomain [47370] (2 families) (S)
  5. 2316814Family a.29.2.1: Bromodomain [47371] (6 proteins)
  6. 2316891Protein automated matches [190366] (2 species)
    not a true protein

Species:

  1. 2316892Human (Homo sapiens) [TaxId:9606] [187201] (51 PDB entries)
    1. Domain for 1b91:
    2. Domains for 3d7c:
      1. 2316915Domain d3d7ca2: 3d7c A:729-837 [157420]
        Other proteins in same PDB: d3d7ca3
        automated match to d1f68a_
      2. 2316916Domain d3d7cb_: 3d7c B: [157421]
        Other proteins in same PDB: d3d7ca3
        automated match to d1f68a_
    3. Domains for 3i3j:
      1. 2316930Domain d3i3ja_: 3i3j A: [178050]
        automated match to d1jspb_
        complexed with cl, peg, so4
      2. 2316931Domain d3i3jb_: 3i3j B: [178051]
        automated match to d1jspb_
        complexed with cl, peg, so4
      3. 2316932Domain d3i3jc_: 3i3j C: [178052]
        automated match to d1jspb_
        complexed with cl, peg, so4
      4. 2316933Domain d3i3jd_: 3i3j D: [178053]
        automated match to d1jspb_
        complexed with cl, peg, so4
      5. 2316934Domain d3i3je_: 3i3j E: [178054]
        automated match to d1jspb_
        complexed with cl, peg, so4
      6. 2316935Domain d3i3jf_: 3i3j F: [178055]
        automated match to d1jspb_
        complexed with cl, peg, so4
      7. 2316936Domain d3i3jg_: 3i3j G: [178056]
        automated match to d1jspb_
        complexed with cl, peg, so4
      8. 2316937Domain d3i3jh_: 3i3j H: [178057]
        automated match to d1jspb_
        complexed with cl, peg, so4
      9. 2316938Domain d3i3ji_: 3i3j I: [178058]
        automated match to d1jspb_
        complexed with cl, peg, so4
      10. 2316939Domain d3i3jj_: 3i3j J: [178059]
        automated match to d1jspb_
        complexed with cl, peg, so4
      11. 2316940Domain d3i3jk_: 3i3j K: [178060]
        automated match to d1jspb_
        complexed with cl, peg, so4
      12. 2316941Domain d3i3jl_: 3i3j L: [178061]
        automated match to d1jspb_
        complexed with cl, peg, so4
    4. Domains for 3p1c:
      1. 2316901Domain d3p1ca_: 3p1c A: [183445]
        automated match to d1jspb_
        complexed with aly, k, scn
      2. 2316902Domain d3p1cb_: 3p1c B: [183446]
        automated match to d1jspb_
        complexed with aly, k, scn
    5. Domains for 3p1d:
      1. 2316907Domain d3p1da_: 3p1d A: [183447]
        automated match to d1jspb_
        complexed with k, mb3, scn
      2. 2316908Domain d3p1db_: 3p1d B: [183448]
        automated match to d1jspb_
        complexed with k, mb3, scn
    6. Domains for 3p1e:
      1. 2316903Domain d3p1ea_: 3p1e A: [183449]
        automated match to d1jspb_
        complexed with dms, k, scn
      2. 2316904Domain d3p1eb_: 3p1e B: [183450]
        automated match to d1jspb_
        complexed with dms, k, scn
    7. Domains for 3p1f:
      1. 2316897Domain d3p1fa1: 3p1f A:1081-1197 [183451]
        Other proteins in same PDB: d3p1fa2
        automated match to d1jspb_
        complexed with 3pf, edo, k
      2. 2316898Domain d3p1fb_: 3p1f B: [183452]
        Other proteins in same PDB: d3p1fa2
        automated match to d1jspb_
        complexed with 3pf, edo, k
    8. Domains for 3svh:
      1. 2316905Domain d3svha_: 3svh A: [200702]
        automated match to d3p1fa_
        complexed with edo, krg
      2. 2316906Domain d3svhb_: 3svh B: [192084]
        automated match to d3p1fa_
        complexed with edo, krg
    9. Domain for 3uv5:
    10. Domains for 4a9k:
      1. 2316899Domain d4a9ka_: 4a9k A: [186740]
        automated match to d1jspb_
        complexed with edo, k, scn, tyl
      2. 2316900Domain d4a9kb_: 4a9k B: [186741]
        automated match to d1jspb_
        complexed with edo, k, scn, tyl
    11. Domains for 4nr4:
      1. 2316909Domain d4nr4a_: 4nr4 A: [229960]
        automated match to d3p1fa_
        complexed with 2lk, edo, mg
      2. 2316910Domain d4nr4b_: 4nr4 B: [229961]
        automated match to d3p1fa_
        complexed with 2lk, edo, mg
    12. Domain for 4nr5:
    13. Domain for 4nr6:
    14. Domain for 4nr7:
    15. Domains for 4nyv:
      1. 2316922Domain d4nyva_: 4nyv A: [236475]
        automated match to d3p1fa_
        complexed with 15e
      2. 2316923Domain d4nyvb_: 4nyv B: [236477]
        automated match to d3p1fa_
        complexed with 15e
      3. 2316924Domain d4nyvc_: 4nyv C: [236478]
        automated match to d3p1ea_
        complexed with 15e
      4. 2316925Domain d4nyvd_: 4nyv D: [236479]
        automated match to d3p1ea_
        complexed with 15e
    16. Domain for 4nyw:
    17. Domain for 4nyx:
    18. Domain for 5bt3:
    19. Domains for 5fdz:
      1. 2316971Domain d5fdza_: 5fdz A: [280409]
        automated match to d1wuma_
        complexed with 5x0, edo
      2. 2316972Domain d5fdzb_: 5fdz B: [280408]
        automated match to d1wuma_
        complexed with 5x0, edo
    20. Domains for 5fe0:
      1. 2316967Domain d5fe0a_: 5fe0 A: [280414]
        automated match to d1wuma_
        complexed with aly
      2. 2316968Domain d5fe0b_: 5fe0 B: [280417]
        automated match to d1wuma_
        complexed with aly
    21. Domains for 5fe1:
      1. 2316963Domain d5fe1a_: 5fe1 A: [280418]
        automated match to d1wuma_
        complexed with 12q, edo
      2. 2316964Domain d5fe1b_: 5fe1 B: [280421]
        automated match to d1wuma_
        complexed with 12q, edo
    22. Domains for 5fe2:
      1. 2316965Domain d5fe2a_: 5fe2 A: [280425]
        automated match to d1wuma_
        complexed with 5wv, edo
      2. 2316966Domain d5fe2b_: 5fe2 B: [280419]
        automated match to d1wuma_
        complexed with 5wv, edo
    23. Domains for 5fe3:
      1. 2316950Domain d5fe3a_: 5fe3 A: [280420]
        automated match to d1wuma_
        complexed with 5wx, edo
      2. 2316951Domain d5fe3b_: 5fe3 B: [280426]
        automated match to d1wuma_
        complexed with 5wx, edo
    24. Domains for 5fe4:
      1. 2316961Domain d5fe4a_: 5fe4 A: [280413]
        automated match to d1wuma_
        complexed with 5wy, edo
      2. 2316962Domain d5fe4b_: 5fe4 B: [280410]
        automated match to d1wuma_
        complexed with 5wy, edo
    25. Domains for 5fe5:
      1. 2316952Domain d5fe5a_: 5fe5 A: [280411]
        automated match to d1wuma_
        complexed with 2qc, dms, edo
      2. 2316953Domain d5fe5b_: 5fe5 B: [280412]
        automated match to d1wuma_
        complexed with 2qc, dms, edo
    26. Domains for 5fe6:
      1. 2316926Domain d5fe6a_: 5fe6 A: [280432]
        automated match to d1wuma_
        complexed with 5wz, dms, edo
      2. 2316927Domain d5fe6b_: 5fe6 B: [280431]
        automated match to d1wuma_
        complexed with 5wz, dms, edo
    27. Domains for 5fe7:
      1. 2316946Domain d5fe7a_: 5fe7 A: [280415]
        automated match to d1wuma_
        complexed with 5wu, dms, edo
      2. 2316947Domain d5fe7b_: 5fe7 B: [280416]
        automated match to d1wuma_
        complexed with 5wu, dms, edo
    28. Domains for 5fe8:
      1. 2316948Domain d5fe8a_: 5fe8 A: [280424]
        automated match to d1wuma_
        complexed with 5wt, dms, edo
      2. 2316949Domain d5fe8b_: 5fe8 B: [280422]
        automated match to d1wuma_
        complexed with 5wt, dms, edo
    29. Domains for 5fe9:
      1. 2316969Domain d5fe9a_: 5fe9 A: [280423]
        automated match to d1wuma_
        complexed with 5ws, edo
      2. 2316970Domain d5fe9b_: 5fe9 B: [280430]
        automated match to d1wuma_
        complexed with 5ws, edo
    30. Domains for 5lpk:
      1. 2316954Domain d5lpka_: 5lpk A: [337857]
        automated match to d4nyxa_
        complexed with edo, pg4, so4, xdm
      2. 2316955Domain d5lpkb_: 5lpk B: [338115]
        automated match to d4nyxa_
        complexed with edo, pg4, so4, xdm
      3. 2316956Domain d5lpkc_: 5lpk C: [337861]
        automated match to d4nyxa_
        complexed with edo, pg4, so4, xdm
      4. 2316957Domain d5lpkd_: 5lpk D: [337884]
        automated match to d4nyxa_
        complexed with edo, pg4, so4, xdm
      5. 2316958Domain d5lpke_: 5lpk E: [337902]
        automated match to d4nyxa_
        complexed with edo, pg4, so4, xdm
      6. 2316959Domain d5lpkf_: 5lpk F: [337899]
        automated match to d4nyxa_
        complexed with edo, pg4, so4, xdm
      7. 2316960Domain d5lpkg_: 5lpk G: [338088]
        automated match to d4nyxa_
        complexed with edo, pg4, so4, xdm
    31. Domains for 5lpm:
      1. 2316912Domain d5lpma1: 5lpm A:1048-1161 [337891]
        Other proteins in same PDB: d5lpma2, d5lpmb2
        automated match to d3i3je_
        complexed with 71y, act
      2. 2316913Domain d5lpmb1: 5lpm B:1048-1161 [337862]
        Other proteins in same PDB: d5lpma2, d5lpmb2
        automated match to d3i3je_
        complexed with 71y, act
    32. Domains for 5lvq:
      1. 2316944Domain d5lvqa_: 5lvq A: [324532]
        automated match to d1b91a_
        complexed with 2lx, dms, edo
      2. 2316945Domain d5lvqb_: 5lvq B: [324548]
        automated match to d1b91a_
        complexed with 2lx, dms, edo
    33. Domains for 5lvr:
      1. 2316942Domain d5lvra_: 5lvr A: [324576]
        automated match to d1b91a_
        complexed with 78y, dms, edo
      2. 2316943Domain d5lvrb_: 5lvr B: [324533]
        automated match to d1b91a_
        complexed with 78y, dms, edo
    34. Domains for 5mkx:
      1. 2316920Domain d5mkxa_: 5mkx A: [343163]
        automated match to d1b91a_
        complexed with 82i, bu1, epe, so4
      2. 2316921Domain d5mkxb_: 5mkx B: [343142]
        automated match to d1b91a_
        complexed with 82i, bu1, epe, so4
    35. Domains for 5mlj:
      1. 2316928Domain d5mlja_: 5mlj A: [343181]
        automated match to d1b91a_
        complexed with 9st, edo
      2. 2316929Domain d5mljb_: 5mlj B: [343131]
        automated match to d1b91a_
        complexed with 9st, edo
    36. Domains for 5mpk:
      1. 3046473Domain d5mpkb_: 5mpk B: [346535]
        automated match to d4nyxa_
        complexed with 0bc
      2. 3046545Domain d5mpka_: 5mpk A: [346607]
        automated match to d4nyxa_
        complexed with 0bc
    37. Domain for 5mpn:
    38. Domain for 5nlk:
    39. Domains for 5nu5:
      1. 2316918Domain d5nu5a1: 5nu5 A:1048-1161 [337894]
        Other proteins in same PDB: d5nu5a2, d5nu5b2
        automated match to d3i3je_
        complexed with 99e, edo
      2. 2316919Domain d5nu5b1: 5nu5 B:1048-1161 [337879]
        Other proteins in same PDB: d5nu5a2, d5nu5b2
        automated match to d3i3je_
        complexed with 99e, edo
    40. Domain for 5owk:
    41. Domain for 5w0e:
    42. Domain for 5w0f:
    43. Domains for 5w0l:
      1. 3048294Domain d5w0la_: 5w0l A: [348356]
        automated match to d4nyxa_
        complexed with 9ud
      2. 3048348Domain d5w0lb_: 5w0l B: [348410]
        automated match to d4nyxa_
        complexed with 9ud
    44. Domain for 5w0q:
    45. Domain for 5xxh:
    46. Domains for 6ay3:
      1. 3049251Domain d6ay3a_: 6ay3 A: [349313]
        automated match to d4nyxa_
        complexed with c3j, edo, na
      2. 3049486Domain d6ay3b_: 6ay3 B: [349548]
        automated match to d4nyxa_
        complexed with c3j, edo, na
    47. Domain for 6ay5:
    48. Domains for 6fqo:
      1. 3056739Domain d6fqob1: 6fqo B:1081-1197 [356801]
        Other proteins in same PDB: d6fqob2
        automated match to d4nyxa_
        complexed with e2t, edo
      2. 3056785Domain d6fqoa_: 6fqo A: [356847]
        Other proteins in same PDB: d6fqob2
        automated match to d4nyxa_
        complexed with e2t, edo
    49. Domain for 6fqu:
    50. Domains for 6fr0:
      1. 3056752Domain d6fr0b1: 6fr0 B:1081-1197 [356814]
        Other proteins in same PDB: d6fr0b2
        automated match to d4nyxa_
        complexed with e3h
      2. 3056807Domain d6fr0a_: 6fr0 A: [356869]
        Other proteins in same PDB: d6fr0b2
        automated match to d4nyxa_
        complexed with e3h
    51. Domains for 6frf:
      1. 3056690Domain d6frfd_: 6frf D: [356752]
        Other proteins in same PDB: d6frfa2
        automated match to d4nyxa_
        complexed with e3t
      2. 3056703Domain d6frfa1: 6frf A:1081-1197 [356765]
        Other proteins in same PDB: d6frfa2
        automated match to d4nyxa_
        complexed with e3t
      3. 3056712Domain d6frfb_: 6frf B: [356774]
        Other proteins in same PDB: d6frfa2
        automated match to d4nyxa_
        complexed with e3t
      4. 3056789Domain d6frfc_: 6frf C: [356851]
        Other proteins in same PDB: d6frfa2
        automated match to d4nyxa_
        complexed with e3t
  2. 2316974Mouse (Mus musculus) [TaxId:10090] [343120] (2 PDB entries)
    1. Domain for 5ml0:
    2. Domain for 5w0i:

More info for Protein automated matches from a.29.2.1: Bromodomain

Timeline for Protein automated matches from a.29.2.1: Bromodomain: