Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2974297Fold d.126: Pentein, beta/alpha-propeller [55908] (1 superfamily)
    duplication: composed of 5 alpha-beta(2)-alpha-beta units arranged around pseudo fivefold axis
  4. 2974298Superfamily d.126.1: Pentein [55909] (8 families) (S)
  5. 2974383Family d.126.1.6: Porphyromonas-type peptidylarginine deiminase [111155] (3 proteins)
    Pfam PF04371; functionally related to the amidinotransferase, similar active site
  6. 2974407Protein automated matches [190353] (3 species)
    not a true protein

Species:

  1. 2974408Enterococcus faecalis [311217] (1 PDB entry)
  2. 2974417Medicago truncatula [TaxId:3880] [366571] (2 PDB entries)
    1. Domain for 6nib:
    2. Domains for 6nic:
      1. 2974419Domain d6nica_: 6nic A: [366573]
        automated match to d1vkpb_
        complexed with edo, kqy, na, peg, pge
      2. 2974420Domain d6nicb_: 6nic B: [366572]
        automated match to d1vkpb_
        complexed with edo, kqy, na, peg, pge
      3. 2974421Domain d6nicc_: 6nic C: [366603]
        automated match to d1vkpb_
        complexed with edo, kqy, na, peg, pge
      4. 2974422Domain d6nicd_: 6nic D: [366589]
        automated match to d1vkpb_
        complexed with edo, kqy, na, peg, pge
  3. 2974423Thale cress (Arabidopsis thaliana) [TaxId:3702] [187181] (3 PDB entries)
    1. Domains for 2q3u:
      1. 2974424Domain d2q3ua_: 2q3u A: [139809]
        automated match to d1vkpa_
        complexed with edo, mg, mpo
      2. 2974425Domain d2q3ub_: 2q3u B: [139810]
        automated match to d1vkpa_
        complexed with edo, mg, mpo
    2. Domain for 3h7c:
    3. Domain for 3h7k:

More info for Protein automated matches from d.126.1.6: Porphyromonas-type peptidylarginine deiminase

Timeline for Protein automated matches from d.126.1.6: Porphyromonas-type peptidylarginine deiminase: