SCOPe 2.05: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.05
Class b: All beta proteins [48724] (176 folds)
Fold b.47: Trypsin-like serine proteases [50493] (1 superfamily)
barrel, closed; n=6, S=8; greek-key
duplication: consists of two domains of the same fold
Superfamily b.47.1: Trypsin-like serine proteases [50494] (5 families)
Family b.47.1.1: Prokaryotic proteases [50495] (16 proteins)
Protein automated matches [190306] (4 species)
not a true protein

Species:

Escherichia coli K-12 [TaxId:83333] [225952] (8 PDB entries)
1. Domains for 3lgi:
  1. Domain d3lgia_: 3lgi A: [212874]
    automated match to d2qf3a1
    complexed with po4
  2. Domain d3lgib_: 3lgi B: [212875]
    automated match to d2qf3a1
    complexed with po4
  3. Domain d3lgic_: 3lgi C: [212876]
    automated match to d2qf3a1
    complexed with po4
2. Domain for 3lgt:
  - Domain d3lgta_: 3lgt A: [232835]
    automated match to d3lgib_
    mutant
3. Domain for 3lgu:
  - Domain d3lgua_: 3lgu A: [232836]
    automated match to d3lgib_
    mutant
4. Domains for 3lgv:
  1. Domain d3lgva_: 3lgv A: [232837]
    automated match to d3lgib_
    mutant
  2. Domain d3lgvb_: 3lgv B: [239414]
    automated match to d3lgva_
    mutant
  3. Domain d3lgvc_: 3lgv C: [239415]
    automated match to d3lgva_
    mutant
  4. Domain d3lgvd_: 3lgv D: [239416]
    automated match to d3lgva_
    mutant
  5. Domain d3lgve_: 3lgv E: [239417]
    automated match to d3lgva_
    mutant
  6. Domain d3lgvf_: 3lgv F: [239418]
    automated match to d3lgva_
    mutant
  7. Domain d3lgvg_: 3lgv G: [239419]
    automated match to d3lgva_
    mutant
  8. Domain d3lgvh_: 3lgv H: [239420]
    automated match to d3lgva_
    mutant
  9. Domain d3lgvi_: 3lgv I: [239421]
    automated match to d3lgva_
    mutant
5. Domain for 3lgw:
  - Domain d3lgwa_: 3lgw A: [232838]
    automated match to d3lgib_
    mutant
6. Domain for 3lgy:
  - Domain d3lgya_: 3lgy A: [232839]
    automated match to d3lgib_
    complexed with cl, mg; mutant
7. Domain for 3lh1:
  - Domain d3lh1a_: 3lh1 A: [232840]
    automated match to d3lgib_
    mutant
8. Domains for 3lh3:
  1. Domain d3lh3a_: 3lh3 A: [232841]
    automated match to d3lgib_
  2. Domain d3lh3b_: 3lh3 B: [239422]
    automated match to d3lh3a_
  3. Domain d3lh3c_: 3lh3 C: [239423]
    automated match to d3lh3a_
  4. Domain d3lh3d_: 3lh3 D: [239424]
    automated match to d3lh3a_
  5. Domain d3lh3e_: 3lh3 E: [239425]
    automated match to d3lh3a_
  6. Domain d3lh3f_: 3lh3 F: [239426]
    automated match to d3lh3a_
  7. Domain d3lh3g_: 3lh3 G: [239427]
    automated match to d3lh3a_
  8. Domain d3lh3h_: 3lh3 H: [239428]
    automated match to d3lh3a_
  9. Domain d3lh3i_: 3lh3 I: [239429]
    automated match to d3lh3a_
Lysobacter enzymogenes [TaxId:69] [189631] (4 PDB entries)
1. Domain for 3m7t:
  - Domain d3m7ta_: 3m7t A: [180915]
    automated match to d1boqa_
    complexed with gol, so4; mutant
2. Domain for 3m7u:
  - Domain d3m7ua_: 3m7u A: [180916]
    automated match to d1p01a_
    complexed with so4; mutant
3. Domains for 4nsv:
  1. Domain d4nsva_: 4nsv A: [257188]
    automated match to d1arba_
    complexed with 2oy, cl, so4; mutant
  2. Domain d4nsvb_: 4nsv B: [257995]
    automated match to d1arba_
    complexed with 2oy, cl, so4; mutant
4. Domains for 4nsy:
  1. Domain d4nsya_: 4nsy A: [257189]
    automated match to d1arba_
    complexed with 2oy, ca, cl
  2. Domain d4nsyb_: 4nsy B: [257996]
    automated match to d1arba_
    complexed with 2oy, ca, cl
Staphylococcus epidermidis [TaxId:176280] [227720] (1 PDB entry)
- Domain for 4jcn:
  - Domain d4jcna_: 4jcn A: [227721]
    automated match to d1wcza_
Streptomyces griseus [TaxId:1911] [187119] (8 PDB entries)
1. Domain for 2gkv:
  - Domain d2gkve_: 2gkv E: [135335]
    Other proteins in same PDB: d2gkva_, d2gkvb_
    automated match to d1sgde_
2. Domain for 2nu0:
  - Domain d2nu0e_: 2nu0 E: [138597]
    Other proteins in same PDB: d2nu0i1
    automated match to d1sgde_
3. Domain for 2nu1:
  - Domain d2nu1e_: 2nu1 E: [138598]
    Other proteins in same PDB: d2nu1i1
    automated match to d1sgde_
4. Domain for 2nu2:
  - Domain d2nu2e_: 2nu2 E: [138599]
    Other proteins in same PDB: d2nu2i1
    automated match to d1sgde_
5. Domain for 2nu3:
  - Domain d2nu3e_: 2nu3 E: [138600]
    Other proteins in same PDB: d2nu3i_
    automated match to d1sgde_
6. Domain for 2nu4:
  - Domain d2nu4e_: 2nu4 E: [138602]
    Other proteins in same PDB: d2nu4i_
    automated match to d1sgde_
7. Domain for 2qa9:
  - Domain d2qa9e_: 2qa9 E: [150200]
    automated match to d1sgde_
    complexed with cl, edo, gol, so4
8. Domains for 2qaa:
  1. Domain d2qaaa_: 2qaa A: [150201]
    automated match to d1sgde_
    complexed with acy, cl, edo, epe, gol, so4, tyr
  2. Domain d2qaab_: 2qaa B: [150202]
    automated match to d1sgde_
    complexed with acy, cl, edo, epe, gol, so4, tyr

More info for Protein automated matches from b.47.1.1: Prokaryotic proteases

Timeline for Protein automated matches from b.47.1.1: Prokaryotic proteases:

Protein automated matches from b.47.1.1: Prokaryotic proteases first appeared in SCOPe 2.01
Protein automated matches from b.47.1.1: Prokaryotic proteases appears in SCOPe 2.04
Protein automated matches from b.47.1.1: Prokaryotic proteases appears in SCOPe 2.06
Protein automated matches from b.47.1.1: Prokaryotic proteases appears in the current release, SCOPe 2.08