Lineage for Protein: automated matches

  1. Root: SCOPe 2.03
  2. 1287432Class b: All beta proteins [48724] (174 folds)
  3. 1324198Fold b.60: Lipocalins [50813] (1 superfamily)
    barrel, closed or opened; n=8, S=12; meander
  4. 1324199Superfamily b.60.1: Lipocalins [50814] (10 families) (S)
    bind hydrophobic ligands in their interior
  5. 1324658Family b.60.1.2: Fatty acid binding protein-like [50847] (18 proteins)
    ten-stranded meander beta-sheet folded upon itself
    relates to the common fold by opening the barrel and insertion of beta-hairpin
  6. 1324891Protein automated matches [190295] (5 species)
    not a true protein

Species:

  1. 1324892Axolotl (Ambystoma mexicanum) [TaxId:8296] [187103] (1 PDB entry)
  2. 1324894Eel (Anguilla japonica) [TaxId:7937] [197394] (3 PDB entries)
    1. Domains for 4i3b:
      1. 1324895Domain d4i3ba_: 4i3b A: [197395]
        automated match to d1fdqa_
        complexed with bla, peg
      2. 1324896Domain d4i3bb_: 4i3b B: [202525]
        automated match to d4i3ba_
        complexed with bla, peg
      3. 1324897Domain d4i3bc_: 4i3b C: [202526]
        automated match to d4i3ba_
        complexed with bla, peg
      4. 1324898Domain d4i3bd_: 4i3b D: [202527]
        automated match to d4i3ba_
        complexed with bla, peg
      5. 1324899Domain d4i3be_: 4i3b E: [202528]
        automated match to d4i3ba_
        complexed with bla, peg
      6. 1324900Domain d4i3bf_: 4i3b F: [202529]
        automated match to d4i3ba_
        complexed with bla, peg
    2. Domains for 4i3c:
      1. 1324901Domain d4i3ca_: 4i3c A: [197396]
        automated match to d1fdqa_
        complexed with bla; mutant
      2. 1324902Domain d4i3cb_: 4i3c B: [202530]
        automated match to d4i3ca_
        complexed with bla; mutant
    3. Domains for 4i3d:
      1. 1324903Domain d4i3da_: 4i3d A: [197397]
        automated match to d1fdqa_
        complexed with bla; mutant
      2. 1324904Domain d4i3db_: 4i3d B: [202531]
        automated match to d4i3da_
        complexed with bla; mutant
      3. 1324905Domain d4i3dc_: 4i3d C: [202532]
        automated match to d4i3da_
        complexed with bla; mutant
      4. 1324906Domain d4i3dd_: 4i3d D: [202533]
        automated match to d4i3da_
        complexed with bla; mutant
  3. 1324907Human (Homo sapiens) [TaxId:9606] [187133] (21 PDB entries)
    1. Domain for 2rcq:
    2. Domain for 2rct:
    3. Domain for 2wut:
    4. Domains for 3rsw:
      1. 1324943Domain d3rswa_: 3rsw A: [216040]
        automated match to d2hnxa_
      2. 1324944Domain d3rswb_: 3rsw B: [216041]
        automated match to d1hmsa_
    5. Domains for 3wbg:
      1. 1324933Domain d3wbga_: 3wbg A: [228744]
        automated match to d1lida_
        complexed with 2an
      2. 1324934Domain d3wbgb_: 3wbg B: [228742]
        automated match to d1lida_
        complexed with 2an
      3. 1324935Domain d3wbgc_: 3wbg C: [233941]
        automated match to d3wbgb_
        complexed with 2an
      4. 1324936Domain d3wbgd_: 3wbg D: [228743]
        automated match to d1lida_
        complexed with 2an
    6. Domains for 4a1h:
      1. 1324928Domain d4a1ha_: 4a1h A: [201392]
        automated match to d4a1hc_
        complexed with cl, gol, plm; mutant
      2. 1324929Domain d4a1hb_: 4a1h B: [201393]
        automated match to d4a1hc_
        complexed with cl, gol, plm; mutant
      3. 1324930Domain d4a1hc_: 4a1h C: [193511]
        automated match to d2wuta_
        complexed with cl, gol, plm; mutant
    7. Domains for 4a1y:
      1. 1324909Domain d4a1ya_: 4a1y A: [201394]
        automated match to d4a1yc_
        complexed with cl, plm; mutant
      2. 1324910Domain d4a1yb_: 4a1y B: [194583]
        automated match to d2wuta_
        complexed with cl, plm; mutant
      3. 1324911Domain d4a1yc_: 4a1y C: [194582]
        automated match to d2wuta_
        complexed with cl, plm; mutant
      4. 1324912Domain d4a1yd_: 4a1y D: [201395]
        automated match to d4a1yc_
        complexed with cl, plm; mutant
    8. Domain for 4a8z:
    9. Domains for 4azm:
      1. 1324939Domain d4azma_: 4azm A: [219223]
        automated match to d1b56a_
        complexed with gol, t4b
      2. 1324940Domain d4azmb_: 4azm B: [219224]
        automated match to d1b56a_
        complexed with gol, t4b
    10. Domains for 4azr:
      1. 1324941Domain d4azra_: 4azr A: [219230]
        automated match to d1b56a_
        complexed with a9m, cl
      2. 1324942Domain d4azrb_: 4azr B: [219231]
        automated match to d1b56a_
        complexed with a9m, cl
    11. Domain for 4bvm:
    12. Domains for 4ede:
      1. 1324917Domain d4edea_: 4ede A: [194192]
        automated match to d2rcta_
        complexed with act, ret; mutant
      2. 1324918Domain d4edeb_: 4ede B: [194191]
        automated match to d2rcta_
        complexed with act, ret; mutant
    13. Domains for 4eej:
      1. 1324919Domain d4eeja_: 4eej A: [194190]
        automated match to d2rcta_
        complexed with act, ret; mutant
      2. 1324920Domain d4eejb_: 4eej B: [201833]
        automated match to d4eeja_
        complexed with act, ret; mutant
    14. Domains for 4efg:
      1. 1324921Domain d4efga_: 4efg A: [201838]
        automated match to d4efgb_
        complexed with act, ret; mutant
      2. 1324922Domain d4efgb_: 4efg B: [194188]
        automated match to d2rcta_
        complexed with act, ret; mutant
    15. Domains for 4exz:
      1. 1324925Domain d4exza_: 4exz A: [194187]
        automated match to d2rcta_
        complexed with act, ret; mutant
      2. 1324926Domain d4exzb_: 4exz B: [194189]
        automated match to d2rcta_
        complexed with act, ret; mutant
    16. Domains for 4gkc:
      1. 1324915Domain d4gkca_: 4gkc A: [202270]
        automated match to d4gkcb_
        complexed with ret; mutant
      2. 1324916Domain d4gkcb_: 4gkc B: [194185]
        automated match to d2rcta_
        complexed with ret; mutant
    17. Domain for 4i9r:
    18. Domain for 4i9s:
    19. Domain for 4lkp:
    20. Domain for 4m6s:
    21. Domain for 4m7m:
  4. 1324945Mouse (Mus musculus) [TaxId:10090] [226737] (4 PDB entries)
    1. Domains for 4azn:
      1. 1324949Domain d4azna_: 4azn A: [219225]
        automated match to d1b56a_
      2. 1324950Domain d4aznb_: 4azn B: [219226]
        automated match to d1b56a_
    2. Domain for 4azo:
    3. Domain for 4azp:
    4. Domain for 4azq:
  5. 1324951Zebrafish (Danio rerio) [TaxId:7955] [188008] (3 PDB entries)
    1. Domain for 2qo4:
    2. Domain for 2qo5:
    3. Domain for 2qo6:

More info for Protein automated matches from b.60.1.2: Fatty acid binding protein-like

Timeline for Protein automated matches from b.60.1.2: Fatty acid binding protein-like: