Lineage for Protein: automated matches

  1. Root: SCOPe 2.01
  2. 1058004Class f: Membrane and cell surface proteins and peptides [56835] (57 folds)
  3. 1058226Fold f.4: Transmembrane beta-barrels [56924] (6 superfamilies)
    not a true fold, gathers together transmembrane barrels of different (n,S)
  4. 1058287Superfamily f.4.3: Porins [56935] (4 families) (S)
  5. 1058288Family f.4.3.1: Porin [56936] (2 proteins)
    trimer, one subunit folds into (16,20) barrel
  6. 1058331Protein automated matches [190289] (2 species)
    not a true protein

Species:

  1. 1058332Delftia acidovorans [TaxId:80866] [187093] (2 PDB entries)
    1. Domain for 2fgq:
    2. Domain for 2fgr:
  2. 1058335Escherichia coli [TaxId:562] [187889] (6 PDB entries)
    1. Domains for 2j1n:
      1. 1058336Domain d2j1na_: 2j1n A: [165803]
        automated match to d1osma_
        complexed with cl, d12, mg
      2. 1058337Domain d2j1nb_: 2j1n B: [165804]
        automated match to d1osma_
        complexed with cl, d12, mg
      3. 1058338Domain d2j1nc_: 2j1n C: [165805]
        automated match to d1osma_
        complexed with cl, d12, mg
    2. Domains for 2j4u:
      1. 1058351Domain d2j4up_: 2j4u P: [165893]
        automated match to d1osma_
      2. 1058352Domain d2j4uq_: 2j4u Q: [165894]
        automated match to d1osma_
      3. 1058353Domain d2j4ur_: 2j4u R: [165895]
        automated match to d1osma_
      4. 1058354Domain d2j4uu_: 2j4u U: [165896]
        automated match to d1osma_
      5. 1058355Domain d2j4uv_: 2j4u V: [165897]
        automated match to d1osma_
      6. 1058356Domain d2j4uw_: 2j4u W: [165898]
        automated match to d1osma_
    3. Domain for 2xe1:
    4. Domains for 2xe2:
      1. 1058346Domain d2xe2a_: 2xe2 A: [170049]
        automated match to d1osma_
        complexed with oes; mutant
      2. 1058347Domain d2xe2b_: 2xe2 B: [170050]
        automated match to d1osma_
        complexed with oes; mutant
      3. 1058348Domain d2xe2c_: 2xe2 C: [170051]
        automated match to d1osma_
        complexed with oes; mutant
    5. Domains for 2xe3:
      1. 1058349Domain d2xe3a_: 2xe3 A: [170052]
        automated match to d1osma_
        complexed with bog
      2. 1058350Domain d2xe3b_: 2xe3 B: [170053]
        automated match to d1osma_
        complexed with bog
    6. Domains for 2xe5:
      1. 1058340Domain d2xe5a_: 2xe5 A: [170054]
        automated match to d1osma_
        complexed with asz, c8e, d10, d12, hex, hp6, oct, oes, so4; mutant
      2. 1058341Domain d2xe5b_: 2xe5 B: [170055]
        automated match to d1osma_
        complexed with asz, c8e, d10, d12, hex, hp6, oct, oes, so4; mutant
      3. 1058342Domain d2xe5c_: 2xe5 C: [170056]
        automated match to d1osma_
        complexed with asz, c8e, d10, d12, hex, hp6, oct, oes, so4; mutant
      4. 1058343Domain d2xe5d_: 2xe5 D: [170057]
        automated match to d1osma_
        complexed with asz, c8e, d10, d12, hex, hp6, oct, oes, so4; mutant
      5. 1058344Domain d2xe5e_: 2xe5 E: [170058]
        automated match to d1osma_
        complexed with asz, c8e, d10, d12, hex, hp6, oct, oes, so4; mutant
      6. 1058345Domain d2xe5f_: 2xe5 F: [170059]
        automated match to d1osma_
        complexed with asz, c8e, d10, d12, hex, hp6, oct, oes, so4; mutant

More info for Protein automated matches from f.4.3.1: Porin

Timeline for Protein automated matches from f.4.3.1: Porin: