Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2568173Class e: Multi-domain proteins (alpha and beta) [56572] (71 folds)
  3. 2571153Fold e.8: DNA/RNA polymerases [56671] (1 superfamily)
    divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members
  4. 2571154Superfamily e.8.1: DNA/RNA polymerases [56672] (8 families) (S)
    "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain
  5. 2572036Family e.8.1.4: RNA-dependent RNA-polymerase [56694] (3 protein domains)
  6. 2572350Protein automated matches [190260] (24 species)
    not a true protein

Species:

  1. 2572351Bovine viral diarrhea virus [TaxId:11099] [255087] (1 PDB entry)
  2. 2572353Coxsackievirus b3 [TaxId:103903] [188493] (5 PDB entries)
    1. Domain for 3cdu:
    2. Domain for 3cdw:
    3. Domain for 4wfx:
    4. Domain for 4wfy:
    5. Domain for 4wfz:
  3. 2572359Coxsackievirus b3 [TaxId:12072] [271111] (10 PDB entries)
    1. Domain for 4y2a:
    2. Domain for 4y34:
    3. Domain for 4zp6:
    4. Domain for 4zp7:
    5. Domain for 4zp8:
    6. Domain for 4zp9:
    7. Domain for 4zpa:
    8. Domain for 4zpb:
    9. Domain for 4zpc:
    10. Domain for 4zpd:
  4. 2572370Enterovirus d68 [TaxId:42789] [336371] (1 PDB entry)
  5. 2572372Foot-and-mouth disease virus [TaxId:12120] [272422] (2 PDB entries)
    1. Domain for 4wyl:
    2. Domain for 4wyw:
  6. 2572375Hepatitis B virus [TaxId:10407] [259720] (1 PDB entry)
  7. 2572377Hepatitis C virus (isolate 1) [TaxId:11104] [261697] (1 PDB entry)
  8. 2572379Hepatitis C virus genotype 1b (isolate bk) [TaxId:11105] [188687] (15 PDB entries)
    1. Domain for 2wcx:
    2. Domains for 3bsa:
      1. 2572399Domain d3bsaa_: 3bsa A: [172807]
        automated match to d1nb4a_
        protein/RNA complex; complexed with 1pd
      2. 2572400Domain d3bsab_: 3bsa B: [172808]
        automated match to d1nb4a_
        protein/RNA complex; complexed with 1pd
    3. Domains for 3bsc:
      1. 2572403Domain d3bsca_: 3bsc A: [172809]
        automated match to d1nb4a_
        protein/RNA complex; complexed with 2pd
      2. 2572404Domain d3bscb_: 3bsc B: [172810]
        automated match to d1nb4a_
        protein/RNA complex; complexed with 2pd
    4. Domains for 3co9:
      1. 2572387Domain d3co9a_: 3co9 A: [173368]
        automated match to d1nb4a_
        protein/RNA complex; complexed with 3ms
      2. 2572388Domain d3co9b_: 3co9 B: [173369]
        automated match to d1nb4a_
        protein/RNA complex; complexed with 3ms
    5. Domains for 3cvk:
      1. 2572397Domain d3cvka_: 3cvk A: [173501]
        automated match to d1nb4a_
        protein/RNA complex; complexed with n34
      2. 2572398Domain d3cvkb_: 3cvk B: [173502]
        automated match to d1nb4a_
        protein/RNA complex; complexed with n34
    6. Domains for 3d28:
      1. 2572401Domain d3d28a_: 3d28 A: [173632]
        automated match to d1nb4a_
        protein/RNA complex; complexed with b34
      2. 2572402Domain d3d28b_: 3d28 B: [173633]
        automated match to d1nb4a_
        protein/RNA complex; complexed with b34
    7. Domains for 3d5m:
      1. 2572395Domain d3d5ma_: 3d5m A: [173699]
        automated match to d1nb4a_
        protein/RNA complex; complexed with 4ms
      2. 2572396Domain d3d5mb_: 3d5m B: [173700]
        automated match to d1nb4a_
        protein/RNA complex; complexed with 4ms
    8. Domains for 3e51:
      1. 2572385Domain d3e51a_: 3e51 A: [174667]
        automated match to d1nb4a_
        protein/RNA complex; complexed with n35
      2. 2572386Domain d3e51b_: 3e51 B: [174668]
        automated match to d1nb4a_
        protein/RNA complex; complexed with n35
    9. Domains for 3fqk:
      1. 2572391Domain d3fqka1: 3fqk A:2-562 [175979]
        Other proteins in same PDB: d3fqka2, d3fqkb2
        automated match to d1nb4a_
        complexed with 79z
      2. 2572392Domain d3fqkb1: 3fqk B:2-562 [175980]
        Other proteins in same PDB: d3fqka2, d3fqkb2
        automated match to d1nb4a_
        complexed with 79z
    10. Domains for 3g86:
      1. 2572389Domain d3g86a1: 3g86 A:2-562 [176414]
        Other proteins in same PDB: d3g86a2, d3g86b2
        automated match to d1nb4a_
        complexed with ni, t18
      2. 2572390Domain d3g86b1: 3g86 B:2-562 [176415]
        Other proteins in same PDB: d3g86a2, d3g86b2
        automated match to d1nb4a_
        complexed with ni, t18
    11. Domains for 3gyn:
      1. 2572393Domain d3gyna_: 3gyn A: [177096]
        automated match to d1nb4a_
        protein/RNA complex; complexed with b42
      2. 2572394Domain d3gynb_: 3gyn B: [177097]
        automated match to d1nb4a_
        protein/RNA complex; complexed with b42
    12. Domains for 3h2l:
      1. 2572383Domain d3h2la_: 3h2l A: [177153]
        automated match to d1nb4a_
        protein/RNA complex; complexed with yak
      2. 2572384Domain d3h2lb_: 3h2l B: [177154]
        automated match to d1nb4a_
        protein/RNA complex; complexed with yak
    13. Domains for 3h98:
      1. 2572381Domain d3h98a1: 3h98 A:2-562 [177329]
        Other proteins in same PDB: d3h98a2, d3h98b2
        automated match to d1nb4a_
        complexed with b5p, gol
      2. 2572382Domain d3h98b1: 3h98 B:2-563 [177330]
        Other proteins in same PDB: d3h98a2, d3h98b2
        automated match to d1nb4a_
        complexed with b5p, gol
    14. Domains for 3igv:
      1. 2572405Domain d3igva_: 3igv A: [178317]
        automated match to d1nb4a_
        protein/RNA complex; complexed with b80
      2. 2572406Domain d3igvb_: 3igv B: [178318]
        automated match to d1nb4a_
        protein/RNA complex; complexed with b80
    15. Domains for 5w2e:
      1. 2572407Domain d5w2ea1: 5w2e A:3-564 [337993]
        Other proteins in same PDB: d5w2ea2, d5w2eb2
        automated match to d3q0za_
        protein/RNA complex; complexed with 9vy
      2. 2572408Domain d5w2eb1: 5w2e B:3-564 [337980]
        Other proteins in same PDB: d5w2ea2, d5w2eb2
        automated match to d3q0za_
        protein/RNA complex; complexed with 9vy
  9. 2572409Hepatitis C virus genotype 1b (isolate con1) [TaxId:333284] [188792] (8 PDB entries)
    1. Domain for 3fql:
    2. Domains for 5pzk:
      1. 2572413Domain d5pzka_: 5pzk A: [334263]
        automated match to d3q0za_
        protein/RNA complex; complexed with 23e, 2n5, gol, pg4, so4
      2. 2572414Domain d5pzkb_: 5pzk B: [334242]
        automated match to d3q0za_
        protein/RNA complex; complexed with 23e, 2n5, gol, pg4, so4
    3. Domains for 5pzl:
      1. 2572411Domain d5pzla_: 5pzl A: [334248]
        automated match to d3q0za_
        protein/RNA complex; complexed with 23e, 8xv, so4
      2. 2572412Domain d5pzlb_: 5pzl B: [334292]
        automated match to d3q0za_
        protein/RNA complex; complexed with 23e, 8xv, so4
    4. Domains for 5pzm:
      1. 2572417Domain d5pzma_: 5pzm A: [334251]
        automated match to d3q0za_
        protein/RNA complex; complexed with 23e, 8xs, gol, so4
      2. 2572418Domain d5pzmb_: 5pzm B: [334265]
        automated match to d3q0za_
        protein/RNA complex; complexed with 23e, 8xs, gol, so4
    5. Domains for 5pzn:
      1. 2572415Domain d5pzna_: 5pzn A: [334238]
        automated match to d3q0za_
        protein/RNA complex; complexed with 23e, 8xp, gol, so4
      2. 2572416Domain d5pznb_: 5pzn B: [334245]
        automated match to d3q0za_
        protein/RNA complex; complexed with 23e, 8xp, gol, so4
    6. Domains for 5pzo:
      1. 2572419Domain d5pzoa_: 5pzo A: [334240]
        automated match to d3q0za_
        protein/RNA complex; complexed with 23e, 8xm, gol, so4
      2. 2572420Domain d5pzob_: 5pzo B: [334257]
        automated match to d3q0za_
        protein/RNA complex; complexed with 23e, 8xm, gol, so4
    7. Domains for 5pzp:
      1. 2572421Domain d5pzpa_: 5pzp A: [334324]
        automated match to d3q0za_
        protein/RNA complex; complexed with 23e, 8xj, gol, so4
      2. 2572422Domain d5pzpb_: 5pzp B: [334237]
        automated match to d3q0za_
        protein/RNA complex; complexed with 23e, 8xj, gol, so4
    8. Domains for 5twn:
      1. 2572423Domain d5twna_: 5twn A: [331358]
        automated match to d3q0za_
        protein/RNA complex; complexed with 23e, 7ng, so4
      2. 2572424Domain d5twnb_: 5twn B: [331389]
        automated match to d3q0za_
        protein/RNA complex; complexed with 23e, 7ng, so4
  10. 2572425Hepatitis C virus genotype 2a (isolate jfh-1) [TaxId:356411] [189047] (4 PDB entries)
    1. Domain for 2xym:
    2. Domains for 3i5k:
      1. 2572427Domain d3i5ka1: 3i5k A:1-565 [178099]
        Other proteins in same PDB: d3i5ka2, d3i5kb2, d3i5kc2, d3i5kd2
        automated match to d1nb4a_
        complexed with po4
      2. 2572428Domain d3i5kb1: 3i5k B:1-565 [178100]
        Other proteins in same PDB: d3i5ka2, d3i5kb2, d3i5kc2, d3i5kd2
        automated match to d1nb4a_
        complexed with po4
      3. 2572429Domain d3i5kc1: 3i5k C:1-565 [178101]
        Other proteins in same PDB: d3i5ka2, d3i5kb2, d3i5kc2, d3i5kd2
        automated match to d1nb4a_
        complexed with po4
      4. 2572430Domain d3i5kd1: 3i5k D:1-565 [178102]
        Other proteins in same PDB: d3i5ka2, d3i5kb2, d3i5kc2, d3i5kd2
        automated match to d1nb4a_
        complexed with po4
    3. Domain for 4obc:
    4. Domain for 4wt9:
  11. 2572433Hepatitis C virus isolate hc-j6 [TaxId:11113] [189608] (1 PDB entry)
  12. 2572435Hepatitis C virus isolate hc-j8 [TaxId:11115] [188981] (2 PDB entries)
    1. Domains for 3gsz:
      1. 2572436Domain d3gsza_: 3gsz A: [176976]
        automated match to d1nb4a_
      2. 2572437Domain d3gszb_: 3gsz B: [176977]
        automated match to d1nb4a_
    2. Domains for 3hvo:
      1. 2572438Domain d3hvoa_: 3hvo A: [177875]
        automated match to d1nb4a_
        complexed with vgi
      2. 2572439Domain d3hvob_: 3hvo B: [177876]
        automated match to d1nb4a_
        complexed with vgi
  13. 2572440Hepatitis C virus subtype 1a [TaxId:31646] [189338] (1 PDB entry)
  14. 2572444Hepatitis C virus subtype 1b [TaxId:31647] [187148] (4 PDB entries)
    1. Domains for 2ijn:
      1. 2572447Domain d2ijna2: 2ijn A:3-564 [137478]
        Other proteins in same PDB: d2ijna3, d2ijnb3
        automated match to d1c2pb_
        complexed with 221
      2. 2572448Domain d2ijnb2: 2ijn B:3-566 [137479]
        Other proteins in same PDB: d2ijna3, d2ijnb3
        automated match to d1c2pb_
        complexed with 221
    2. Domains for 3hhk:
      1. 2572445Domain d3hhka_: 3hhk A: [177578]
        automated match to d1nb4a_
        protein/RNA complex; complexed with 77z
      2. 2572446Domain d3hhkb_: 3hhk B: [177579]
        automated match to d1nb4a_
        protein/RNA complex; complexed with 77z
    3. Domains for 3udl:
      1. 2572449Domain d3udla_: 3udl A: [186234]
        automated match to d1nb4a_
        complexed with kli
      2. 2572450Domain d3udlb_: 3udl B: [186235]
        automated match to d1nb4a_
        complexed with kli
      3. 2572451Domain d3udlc_: 3udl C: [186236]
        automated match to d1nb4a_
        complexed with kli
      4. 2572452Domain d3udld_: 3udl D: [186237]
        automated match to d1nb4a_
        complexed with kli
    4. Domains for 5czb:
      1. 2572453Domain d5czba1: 5czb A:1-562 [318391]
        Other proteins in same PDB: d5czba2
        automated match to d2ax0a_
        complexed with 55w, gol, mes, peg, so4
      2. 2572454Domain d5czbb_: 5czb B: [318557]
        Other proteins in same PDB: d5czba2
        automated match to d2ax0a_
        complexed with 55w, gol, mes, peg, so4
  15. 2572455Hepatitis C virus [TaxId:11103] [187048] (44 PDB entries)
    1. Domain for 1yuy:
    2. Domain for 1yv2:
    3. Domain for 1yvf:
      • 2572522Domain d1yvfa_: 1yvf A: [162311]
        automated match to d1nb4a_
        protein/RNA complex; complexed with cl, gol, ph7, po4
    4. Domain for 1yvx:
    5. Domain for 1yvz:
    6. Domain for 1z4u:
      • 2572539Domain d1z4ua_: 1z4u A: [162385]
        automated match to d1nb4a_
        protein/RNA complex; complexed with cl, gol, ph9, po4
    7. Domains for 2awz:
      1. 2572486Domain d2awza_: 2awz A: [162937]
        automated match to d1nb4a_
        protein/RNA complex; complexed with 5h, so4
      2. 2572487Domain d2awzb_: 2awz B: [162938]
        automated match to d1nb4a_
        protein/RNA complex; complexed with 5h, so4
    8. Domains for 2ax0:
      1. 2572475Domain d2ax0a_: 2ax0 A: [162939]
        automated match to d1nb4a_
        protein/RNA complex; complexed with 5x, so4
      2. 2572476Domain d2ax0b_: 2ax0 B: [162940]
        automated match to d1nb4a_
        protein/RNA complex; complexed with 5x, so4
    9. Domains for 2ax1:
      1. 2572480Domain d2ax1a_: 2ax1 A: [162941]
        automated match to d1nb4a_
        protein/RNA complex; complexed with 5ee, so4
      2. 2572481Domain d2ax1b_: 2ax1 B: [162942]
        automated match to d1nb4a_
        protein/RNA complex; complexed with 5ee, so4
    10. Domains for 2d3u:
      1. 2572512Domain d2d3ua_: 2d3u A: [131232]
        automated match to d1nb4a_
        protein/RNA complex; complexed with cct
      2. 2572513Domain d2d3ub_: 2d3u B: [131233]
        automated match to d1nb4a_
        protein/RNA complex; complexed with cct
    11. Domains for 2d3z:
      1. 2572464Domain d2d3za_: 2d3z A: [131234]
        automated match to d1nb4a_
        protein/RNA complex; complexed with fih
      2. 2572465Domain d2d3zb_: 2d3z B: [131235]
        automated match to d1nb4a_
        protein/RNA complex; complexed with fih
    12. Domains for 2d41:
      1. 2572484Domain d2d41a_: 2d41 A: [131236]
        automated match to d1nb4a_
        protein/RNA complex; complexed with snh
      2. 2572485Domain d2d41b_: 2d41 B: [131237]
        automated match to d1nb4a_
        protein/RNA complex; complexed with snh
    13. Domains for 2dxs:
      1. 2572496Domain d2dxsa_: 2dxs A: [204047]
        automated match to d3vqsd_
        protein/RNA complex; complexed with jtp
      2. 2572497Domain d2dxsb_: 2dxs B: [204048]
        automated match to d3vqsd_
        protein/RNA complex; complexed with jtp
    14. Domains for 2gc8:
      1. 2572494Domain d2gc8a_: 2gc8 A: [134970]
        automated match to d1nb4a_
        complexed with 885
      2. 2572495Domain d2gc8b_: 2gc8 B: [134971]
        automated match to d1nb4a_
        complexed with 885
    15. Domains for 2hwh:
      1. 2572508Domain d2hwha2: 2hwh A:3-564 [136822]
        Other proteins in same PDB: d2hwha3, d2hwhb3
        automated match to d1c2pb_
        protein/RNA complex; complexed with rna
      2. 2572509Domain d2hwhb2: 2hwh B:3-566 [136823]
        Other proteins in same PDB: d2hwha3, d2hwhb3
        automated match to d1c2pb_
        protein/RNA complex; complexed with rna
    16. Domains for 2hwi:
      1. 2572482Domain d2hwia2: 2hwi A:3-564 [136824]
        Other proteins in same PDB: d2hwia3, d2hwib3
        automated match to d1c2pb_
        protein/RNA complex; complexed with vrx
      2. 2572483Domain d2hwib2: 2hwi B:3-566 [136825]
        Other proteins in same PDB: d2hwia3, d2hwib3
        automated match to d1c2pb_
        protein/RNA complex; complexed with vrx
    17. Domains for 2i1r:
      1. 2572506Domain d2i1ra2: 2i1r A:3-564 [136986]
        Other proteins in same PDB: d2i1ra3, d2i1rb3
        automated match to d1c2pb_
        protein/RNA complex; complexed with vxr
      2. 2572507Domain d2i1rb2: 2i1r B:3-566 [136987]
        Other proteins in same PDB: d2i1ra3, d2i1rb3
        automated match to d1c2pb_
        protein/RNA complex; complexed with vxr
    18. Domains for 2jc0:
      1. 2572488Domain d2jc0a_: 2jc0 A: [165991]
        automated match to d1nb4a_
        complexed with 699
      2. 2572489Domain d2jc0b_: 2jc0 B: [165992]
        automated match to d1nb4a_
        complexed with 699
    19. Domains for 2jc1:
      1. 2572473Domain d2jc1a_: 2jc1 A: [165993]
        automated match to d1nb4a_
        complexed with 698
      2. 2572474Domain d2jc1b_: 2jc1 B: [165994]
        automated match to d1nb4a_
        complexed with 698
    20. Domains for 2o5d:
      1. 2572492Domain d2o5da2: 2o5d A:3-564 [138918]
        Other proteins in same PDB: d2o5da3, d2o5db3
        automated match to d1c2pb_
        protein/RNA complex; complexed with vr1
      2. 2572493Domain d2o5db2: 2o5d B:3-566 [138919]
        Other proteins in same PDB: d2o5da3, d2o5db3
        automated match to d1c2pb_
        protein/RNA complex; complexed with vr1
    21. Domains for 2xhu:
      1. 2572490Domain d2xhua_: 2xhu A: [170098]
        automated match to d1nb4a_
        complexed with so4
      2. 2572491Domain d2xhub_: 2xhu B: [170099]
        automated match to d1nb4a_
        complexed with so4
    22. Domains for 2xhv:
      1. 2572466Domain d2xhva_: 2xhv A: [170100]
        automated match to d1nb4a_
        complexed with mg, so4; mutant
      2. 2572467Domain d2xhvb_: 2xhv B: [170101]
        automated match to d1nb4a_
        complexed with mg, so4; mutant
    23. Domain for 2xhw:
    24. Domains for 2xi2:
      1. 2572458Domain d2xi2a_: 2xi2 A: [170103]
        automated match to d1nb4a_
        complexed with so4
      2. 2572459Domain d2xi2b_: 2xi2 B: [170104]
        automated match to d1nb4a_
        complexed with so4
      3. 2572460Domain d2xi2c_: 2xi2 C: [170105]
        automated match to d1nb4a_
        complexed with so4
    25. Domains for 2xi3:
      1. 2572456Domain d2xi3a_: 2xi3 A: [170106]
        automated match to d1nb4a_
        complexed with gtp, mg
      2. 2572457Domain d2xi3b_: 2xi3 B: [170107]
        automated match to d1nb4a_
        complexed with gtp, mg
    26. Domain for 2xwy:
    27. Domain for 2xxd:
    28. Domains for 3br9:
      1. 2572498Domain d3br9a_: 3br9 A: [172796]
        automated match to d1nb4a_
        protein/RNA complex; complexed with dey
      2. 2572499Domain d3br9b_: 3br9 B: [172797]
        automated match to d1nb4a_
        protein/RNA complex; complexed with dey
    29. Domains for 3cde:
      1. 2572478Domain d3cdea_: 3cde A: [173147]
        automated match to d1nb4a_
        protein/RNA complex; complexed with n3h
      2. 2572479Domain d3cdeb_: 3cde B: [173148]
        automated match to d1nb4a_
        protein/RNA complex; complexed with n3h
    30. Domains for 3cwj:
      1. 2572516Domain d3cwja_: 3cwj A: [173515]
        automated match to d1nb4a_
        protein/RNA complex; complexed with 321
      2. 2572517Domain d3cwjb_: 3cwj B: [173516]
        automated match to d1nb4a_
        protein/RNA complex; complexed with 321
    31. Domains for 3phe:
      1. 2572502Domain d3phea_: 3phe A: [183740]
        automated match to d1nb4a_
        protein/RNA complex; complexed with c9a
      2. 2572503Domain d3pheb_: 3phe B: [183741]
        automated match to d1nb4a_
        protein/RNA complex; complexed with c9a
      3. 2572504Domain d3phec_: 3phe C: [183742]
        automated match to d1nb4a_
        protein/RNA complex; complexed with c9a
      4. 2572505Domain d3phed_: 3phe D: [183743]
        automated match to d1nb4a_
        protein/RNA complex; complexed with c9a
    32. Domains for 3vqs:
      1. 2572468Domain d3vqsa_: 3vqs A: [194829]
        automated match to d3gnwb_
        protein/RNA complex; complexed with cl, jt1
      2. 2572469Domain d3vqsb_: 3vqs B: [194831]
        automated match to d3gnwb_
        protein/RNA complex; complexed with cl, jt1
      3. 2572470Domain d3vqsc_: 3vqs C: [194828]
        automated match to d3gnwb_
        protein/RNA complex; complexed with cl, jt1
      4. 2572471Domain d3vqsd_: 3vqs D: [194830]
        automated match to d3gnwb_
        protein/RNA complex; complexed with cl, jt1
    33. Domain for 4adp:
    34. Domain for 4aep:
    35. Domains for 4aex:
      1. 2572500Domain d4aexa_: 4aex A: [195482]
        automated match to d3gnwb_
        complexed with po4
      2. 2572501Domain d4aexb_: 4aex B: [195481]
        automated match to d3gnwb_
        complexed with po4
    36. Domains for 4txs:
      1. 2572535Domain d4txsa_: 4txs A: [272392]
        automated match to d4mz4a_
        complexed with 3aq
      2. 2572536Domain d4txsb_: 4txs B: [272394]
        automated match to d4mz4a_
        complexed with 3aq
      3. 2572537Domain d4txsc_: 4txs C: [272393]
        automated match to d4mz4a_
        complexed with 3aq
      4. 2572538Domain d4txsd_: 4txs D: [272395]
        automated match to d4mz4a_
        complexed with 3aq
    37. Domains for 4ty8:
      1. 2572531Domain d4ty8a_: 4ty8 A: [272390]
        automated match to d4mz4a_
        complexed with 3av
      2. 2572532Domain d4ty8b_: 4ty8 B: [272388]
        automated match to d4mz4a_
        complexed with 3av
      3. 2572533Domain d4ty8c_: 4ty8 C: [272396]
        automated match to d4mz4a_
        complexed with 3av
      4. 2572534Domain d4ty8d_: 4ty8 D: [272389]
        automated match to d4mz4a_
        complexed with 3av
    38. Domains for 4ty9:
      1. 2572527Domain d4ty9a_: 4ty9 A: [272397]
        automated match to d4mz4a_
        complexed with 3b0
      2. 2572528Domain d4ty9b_: 4ty9 B: [272401]
        automated match to d4mz4a_
        complexed with 3b0
      3. 2572529Domain d4ty9c_: 4ty9 C: [272402]
        automated match to d4mz4a_
        complexed with 3b0
      4. 2572530Domain d4ty9d_: 4ty9 D: [272403]
        automated match to d4mz4a_
        complexed with 3b0
    39. Domains for 4tya:
      1. 2572544Domain d4tyaa_: 4tya A: [272391]
        automated match to d4mz4a_
        complexed with 3ae
      2. 2572545Domain d4tyab_: 4tya B: [272398]
        automated match to d4mz4a_
        complexed with 3ae
      3. 2572546Domain d4tyac_: 4tya C: [272400]
        automated match to d4mz4a_
        complexed with 3ae
      4. 2572547Domain d4tyad_: 4tya D: [272399]
        automated match to d4mz4a_
        complexed with 3ae
    40. Domains for 4tyb:
      1. 2572540Domain d4tyba_: 4tyb A: [272995]
        automated match to d3qgda_
        complexed with 3b1
      2. 2572541Domain d4tybb_: 4tyb B: [272997]
        automated match to d3qgda_
        complexed with 3b1
      3. 2572542Domain d4tybc_: 4tyb C: [272996]
        automated match to d3qgda_
        complexed with 3b1
      4. 2572543Domain d4tybd_: 4tyb D: [272998]
        automated match to d3qgda_
        complexed with 3b1
    41. Domains for 5trh:
      1. 2572525Domain d5trha_: 5trh A: [326834]
        automated match to d3q0za_
        protein/RNA complex; complexed with 23e, 7hl, so4
      2. 2572526Domain d5trhb_: 5trh B: [326813]
        automated match to d3q0za_
        protein/RNA complex; complexed with 23e, 7hl, so4
    42. Domains for 5tri:
      1. 2572520Domain d5tria_: 5tri A: [326814]
        automated match to d3q0za_
        protein/RNA complex; complexed with 23e, 7hm, so4
      2. 2572521Domain d5trib_: 5tri B: [326822]
        automated match to d3q0za_
        protein/RNA complex; complexed with 23e, 7hm, so4
    43. Domains for 5trj:
      1. 2572523Domain d5trja_: 5trj A: [326765]
        automated match to d3q0za_
        protein/RNA complex; complexed with 23e, 7ho, so4
      2. 2572524Domain d5trjb_: 5trj B: [326797]
        automated match to d3q0za_
        protein/RNA complex; complexed with 23e, 7ho, so4
    44. Domains for 5trk:
      1. 2572514Domain d5trka_: 5trk A: [326763]
        automated match to d3q0za_
        protein/RNA complex; complexed with 23e, 7hh, so4
      2. 2572515Domain d5trkb_: 5trk B: [326821]
        automated match to d3q0za_
        protein/RNA complex; complexed with 23e, 7hh, so4
  16. 2572548Hepatitis C virus [TaxId:420174] [189885] (5 PDB entries)
    1. Domains for 2yoj:
      1. 2572554Domain d2yoja_: 2yoj A: [228281]
        automated match to d3upia_
        complexed with 8y6, po4
      2. 2572555Domain d2yojb_: 2yoj B: [228282]
        automated match to d3upia_
        complexed with 8y6, po4
    2. Domains for 3cso:
      1. 2572556Domain d3csoa_: 3cso A: [173436]
        automated match to d1nb4a_
        complexed with xni
      2. 2572557Domain d3csob_: 3cso B: [173437]
        automated match to d1nb4a_
        complexed with xni
    3. Domain for 3ska:
    4. Domains for 3uph:
      1. 2572550Domain d3upha_: 3uph A: [186370]
        automated match to d1nb4a_
        complexed with 0c1, po4
      2. 2572551Domain d3uphb_: 3uph B: [186371]
        automated match to d1nb4a_
        complexed with 0c1, po4
    5. Domains for 3upi:
      1. 2572552Domain d3upia_: 3upi A: [186372]
        automated match to d1nb4a_
        complexed with 0c2, po4
      2. 2572553Domain d3upib_: 3upi B: [186373]
        automated match to d1nb4a_
        complexed with 0c2, po4
  17. 2572558Human coxsackievirus B3 [TaxId:12072] [193138] (3 PDB entries)
    1. Domains for 4k4x:
      1. 2572563Domain d4k4xa1: 4k4x A:1-462 [193139]
        Other proteins in same PDB: d4k4xa2, d4k4xe2, d4k4xi2, d4k4xm2
        automated match to d1ra6a_
        protein/RNA complex; complexed with gol, mg
      2. 2572564Domain d4k4xe1: 4k4x E:1-462 [202827]
        Other proteins in same PDB: d4k4xa2, d4k4xe2, d4k4xi2, d4k4xm2
        automated match to d4k4xa_
        protein/RNA complex; complexed with gol, mg
      3. 2572565Domain d4k4xi1: 4k4x I:1-462 [202828]
        Other proteins in same PDB: d4k4xa2, d4k4xe2, d4k4xi2, d4k4xm2
        automated match to d4k4xa_
        protein/RNA complex; complexed with gol, mg
      4. 2572566Domain d4k4xm1: 4k4x M:1-462 [193140]
        Other proteins in same PDB: d4k4xa2, d4k4xe2, d4k4xi2, d4k4xm2
        automated match to d1ra6a_
        protein/RNA complex; complexed with gol, mg
    2. Domains for 4k4y:
      1. 2572567Domain d4k4ya1: 4k4y A:1-462 [197201]
        Other proteins in same PDB: d4k4ya2, d4k4ye2, d4k4yi2, d4k4ym2
        automated match to d1ra6a_
        protein/RNA complex; complexed with act, dct, gol
      2. 2572568Domain d4k4ye1: 4k4y E:1-462 [202829]
        Other proteins in same PDB: d4k4ya2, d4k4ye2, d4k4yi2, d4k4ym2
        automated match to d4k4xa_
        protein/RNA complex; complexed with act, dct, gol
      3. 2572569Domain d4k4yi1: 4k4y I:1-462 [202830]
        Other proteins in same PDB: d4k4ya2, d4k4ye2, d4k4yi2, d4k4ym2
        automated match to d4k4xa_
        protein/RNA complex; complexed with act, dct, gol
      4. 2572570Domain d4k4ym1: 4k4y M:1-462 [202831]
        Other proteins in same PDB: d4k4ya2, d4k4ye2, d4k4yi2, d4k4ym2
        automated match to d4k4xa_
        protein/RNA complex; complexed with act, dct, gol
    3. Domains for 4k4z:
      1. 2572559Domain d4k4za_: 4k4z A: [224165]
        automated match to d4k4xa_
        protein/RNA complex; complexed with mg
      2. 2572560Domain d4k4ze_: 4k4z E: [224166]
        automated match to d4k4xa_
        protein/RNA complex; complexed with mg
      3. 2572561Domain d4k4zi_: 4k4z I: [224167]
        automated match to d4k4xa_
        protein/RNA complex; complexed with mg
      4. 2572562Domain d4k4zm_: 4k4z M: [224168]
        automated match to d4k4xa_
        protein/RNA complex; complexed with mg
  18. 2572571Human coxsackievirus [TaxId:12072] [188608] (1 PDB entry)
  19. 2572573Human enterovirus 71 [TaxId:39054] [189988] (4 PDB entries)
    1. Domain for 3n6l:
    2. Domain for 3n6m:
    3. Domain for 3n6n:
    4. Domain for 4ika:
  20. 2572578Human poliovirus 1 [TaxId:12081] [193135] (16 PDB entries)
    1. Domains for 4k4s:
      1. 2572580Domain d4k4sa1: 4k4s A:1-461 [224161]
        Other proteins in same PDB: d4k4sa2, d4k4se2
        automated match to d4k4ta_
        protein/RNA complex; complexed with gol, zn
      2. 2572581Domain d4k4se1: 4k4s E:1-461 [224162]
        Other proteins in same PDB: d4k4sa2, d4k4se2
        automated match to d4k4ta_
        protein/RNA complex; complexed with gol, zn
    2. Domains for 4k4t:
      1. 2572592Domain d4k4ta1: 4k4t A:1-461 [193136]
        Other proteins in same PDB: d4k4ta2, d4k4te2
        automated match to d1ra6a_
        protein/RNA complex; complexed with gol, zn
      2. 2572593Domain d4k4te1: 4k4t E:1-461 [202825]
        Other proteins in same PDB: d4k4ta2, d4k4te2
        automated match to d4k4ta_
        protein/RNA complex; complexed with gol, zn
    3. Domains for 4k4u:
      1. 2572596Domain d4k4ua1: 4k4u A:1-461 [224163]
        Other proteins in same PDB: d4k4ua2, d4k4ue2
        automated match to d4k4va_
        protein/RNA complex; complexed with so4
      2. 2572597Domain d4k4ue1: 4k4u E:1-461 [224164]
        Other proteins in same PDB: d4k4ua2, d4k4ue2
        automated match to d4k4va_
        protein/RNA complex; complexed with so4
    4. Domains for 4k4v:
      1. 2572598Domain d4k4va1: 4k4v A:1-461 [193137]
        Other proteins in same PDB: d4k4va2, d4k4ve2
        automated match to d1ra6a_
        protein/RNA complex; complexed with so4
      2. 2572599Domain d4k4ve1: 4k4v E:1-461 [202826]
        Other proteins in same PDB: d4k4va2, d4k4ve2
        automated match to d4k4va_
        protein/RNA complex; complexed with so4
    5. Domains for 4k4w:
      1. 2572590Domain d4k4wa1: 4k4w A:1-461 [193141]
        Other proteins in same PDB: d4k4wa2, d4k4we2
        automated match to d1ra6a_
        protein/RNA complex
      2. 2572591Domain d4k4we1: 4k4w E:1-461 [193144]
        Other proteins in same PDB: d4k4wa2, d4k4we2
        automated match to d1ra6a_
        protein/RNA complex
    6. Domain for 4nlo:
    7. Domain for 4nlp:
    8. Domain for 4nlq:
    9. Domain for 4nlr:
    10. Domain for 4nls:
    11. Domain for 4nlt:
    12. Domain for 4nlu:
    13. Domain for 4nlv:
    14. Domain for 4nlw:
    15. Domain for 4nlx:
    16. Domain for 4nly:
  21. 2572600Human rhinovirus a16 [TaxId:31708] [193142] (1 PDB entry)
  22. 2572602Murine norovirus 1 [TaxId:223997] [189982] (9 PDB entries)
    1. Domains for 3nah:
      1. 2572627Domain d3naha_: 3nah A: [182114]
        automated match to d1sh0a_
        complexed with so4
      2. 2572628Domain d3nahb_: 3nah B: [182115]
        automated match to d1sh0a_
        complexed with so4
      3. 2572629Domain d3nahc_: 3nah C: [182116]
        automated match to d1sh0a_
        complexed with so4
    2. Domains for 3nai:
      1. 2572624Domain d3naia_: 3nai A: [182117]
        automated match to d1sh0a_
        complexed with gol, mg, mn3, so4, urf
      2. 2572625Domain d3naib_: 3nai B: [182118]
        automated match to d1sh0a_
        complexed with gol, mg, mn3, so4, urf
      3. 2572626Domain d3naic_: 3nai C: [182119]
        automated match to d1sh0a_
        complexed with gol, mg, mn3, so4, urf
    3. Domains for 3qid:
      1. 2572621Domain d3qida_: 3qid A: [184400]
        automated match to d1sh0a_
        complexed with gol, mn3, so4
      2. 2572622Domain d3qidb_: 3qid B: [184401]
        automated match to d1sh0a_
        complexed with gol, mn3, so4
      3. 2572623Domain d3qidc_: 3qid C: [184402]
        automated match to d1sh0a_
        complexed with gol, mn3, so4
    4. Domains for 3sfg:
      1. 2572603Domain d3sfga_: 3sfg A: [216381]
        automated match to d3naha_
        protein/RNA complex; complexed with 2tu, gol, mg, so4
      2. 2572604Domain d3sfgb_: 3sfg B: [216382]
        automated match to d3naha_
        protein/RNA complex; complexed with 2tu, gol, mg, so4
      3. 2572605Domain d3sfgc_: 3sfg C: [216383]
        automated match to d3naha_
        protein/RNA complex; complexed with 2tu, gol, mg, so4
    5. Domains for 3sfu:
      1. 2572606Domain d3sfua_: 3sfu A: [216384]
        automated match to d3naha_
        protein/RNA complex; complexed with gol, mg, rbv, so4
      2. 2572607Domain d3sfub_: 3sfu B: [216385]
        automated match to d3naha_
        protein/RNA complex; complexed with gol, mg, rbv, so4
      3. 2572608Domain d3sfuc_: 3sfu C: [216386]
        automated match to d3naha_
        protein/RNA complex; complexed with gol, mg, rbv, so4
    6. Domains for 3upf:
      1. 2572609Domain d3upfa_: 3upf A: [217472]
        automated match to d1sh0a_
        protein/RNA complex; complexed with 0bu, so4
      2. 2572610Domain d3upfb_: 3upf B: [217473]
        automated match to d1sh0a_
        protein/RNA complex; complexed with 0bu, so4
      3. 2572611Domain d3upfc_: 3upf C: [217474]
        automated match to d1sh0a_
        protein/RNA complex; complexed with 0bu, so4
    7. Domains for 4nru:
      1. 2572612Domain d4nrua_: 4nru A: [260332]
        automated match to d1sh0b_
        protein/RNA complex; complexed with 2ng, mg
      2. 2572613Domain d4nrub_: 4nru B: [263215]
        automated match to d1sh0b_
        protein/RNA complex; complexed with 2ng, mg
      3. 2572614Domain d4nruc_: 4nru C: [263216]
        automated match to d1sh0b_
        protein/RNA complex; complexed with 2ng, mg
      4. 2572615Domain d4nrud_: 4nru D: [263217]
        automated match to d1sh0b_
        protein/RNA complex; complexed with 2ng, mg
      5. 2572616Domain d4nrue_: 4nru E: [263218]
        automated match to d1sh0b_
        protein/RNA complex; complexed with 2ng, mg
      6. 2572617Domain d4nruf_: 4nru F: [263219]
        automated match to d1sh0b_
        protein/RNA complex; complexed with 2ng, mg
    8. Domains for 4o4r:
      1. 2572618Domain d4o4ra_: 4o4r A: [263246]
        automated match to d1sh0b_
        protein/RNA complex; complexed with 20v, so4
      2. 2572619Domain d4o4rb_: 4o4r B: [263247]
        automated match to d1sh0b_
        protein/RNA complex; complexed with 20v, so4
      3. 2572620Domain d4o4rc_: 4o4r C: [260714]
        automated match to d1sh0b_
        protein/RNA complex; complexed with 20v, so4
    9. Domains for 5y3d:
      1. 3054945Domain d5y3dc_: 5y3d C: [355007]
        automated match to d1sh0b_
      2. 3054946Domain d5y3df_: 5y3d F: [355008]
        automated match to d1sh0b_
      3. 3054956Domain d5y3dd_: 5y3d D: [355018]
        automated match to d1sh0b_
      4. 3054958Domain d5y3da_: 5y3d A: [355020]
        automated match to d1sh0b_
      5. 3054967Domain d5y3db_: 5y3d B: [355029]
        automated match to d1sh0b_
      6. 3055006Domain d5y3de_: 5y3d E: [355068]
        automated match to d1sh0b_
  23. 2572630Murine norovirus [TaxId:223997] [226374] (2 PDB entries)
    1. Domains for 3uqs:
      1. 2572631Domain d3uqsa_: 3uqs A: [217492]
        automated match to d1sh0b_
        complexed with so4
      2. 2572632Domain d3uqsb_: 3uqs B: [217493]
        automated match to d1sh0b_
        complexed with so4
      3. 2572633Domain d3uqsc_: 3uqs C: [217494]
        automated match to d1sh0b_
        complexed with so4
    2. Domains for 3ur0:
      1. 2572634Domain d3ur0a_: 3ur0 A: [217497]
        automated match to d1sh0b_
        protein/RNA complex; complexed with so4, svr
      2. 2572635Domain d3ur0b_: 3ur0 B: [217498]
        automated match to d1sh0b_
        protein/RNA complex; complexed with so4, svr
      3. 2572636Domain d3ur0c_: 3ur0 C: [217499]
        automated match to d1sh0b_
        protein/RNA complex; complexed with so4, svr
  24. 2572637Norwalk-like virus [TaxId:95340] [260334] (1 PDB entry)

More info for Protein automated matches from e.8.1.4: RNA-dependent RNA-polymerase

Timeline for Protein automated matches from e.8.1.4: RNA-dependent RNA-polymerase: