Lineage for Protein: automated matches

  1. Root: SCOPe 2.01
  2. 1013083Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1017615Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 1017616Superfamily d.15.1: Ubiquitin-like [54236] (9 families) (S)
  5. 1018301Family d.15.1.0: automated matches [191343] (1 protein)
    not a true family
  6. 1018302Protein automated matches [190233] (4 species)
    not a true protein

Species:

  1. 1018303Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [186998] (1 PDB entry)
  2. 1018306Human (Homo sapiens) [TaxId:9606] [187090] (3 PDB entries)
    1. Domain for 2faz:
    2. Domains for 3ny5:
      1. 1018309Domain d3ny5a_: 3ny5 A: [182620]
        automated match to d1rfaa_
      2. 1018310Domain d3ny5b_: 3ny5 B: [182621]
        automated match to d1rfaa_
      3. 1018311Domain d3ny5c_: 3ny5 C: [182622]
        automated match to d1rfaa_
      4. 1018312Domain d3ny5d_: 3ny5 D: [182623]
        automated match to d1rfaa_
    3. Domain for 3rd2:
  3. 1018313Mouse (Mus musculus) [TaxId:10090] [189205] (2 PDB entries)
    1. Domains for 3a4r:
      1. 1018314Domain d3a4ra_: 3a4r A: [171722]
        automated match to d1wm2a_
        complexed with edo, so4
      2. 1018315Domain d3a4rb_: 3a4r B: [171723]
        automated match to d1wm2a_
        complexed with edo, so4
    2. Domains for 3a4s:
      1. 1018316Domain d3a4sc_: 3a4s C: [171726]
        Other proteins in same PDB: d3a4sa_, d3a4sb_
        automated match to d1wm2a_
        protein/RNA complex
      2. 1018317Domain d3a4sd_: 3a4s D: [171727]
        Other proteins in same PDB: d3a4sa_, d3a4sb_
        automated match to d1wm2a_
        protein/RNA complex
  4. 1018318Trypanosome (Trypanosoma brucei) [TaxId:5691] [189068] (1 PDB entry)

More info for Protein automated matches from d.15.1.0: automated matches

Timeline for Protein automated matches from d.15.1.0: automated matches: