Lineage for Protein: automated matches

  1. Root: SCOPe 2.05
  2. 1886641Class d: Alpha and beta proteins (a+b) [53931] (381 folds)
  3. 1892544Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 1894040Superfamily d.15.4: 2Fe-2S ferredoxin-like [54292] (3 families) (S)
  5. 1894041Family d.15.4.1: 2Fe-2S ferredoxin-related [54293] (4 protein domains)
  6. 1894169Protein automated matches [190231] (8 species)
    not a true protein

Species:

  1. 1894170Aphanothece sacrum [TaxId:1122] [189862] (1 PDB entry)
  2. 1894175Cow (Bos taurus) [TaxId:9913] [186995] (1 PDB entry)
  3. 1894178Cyanidioschyzon merolae [TaxId:45157] [189509] (2 PDB entries)
    1. Domains for 3ab5:
      1. 1894180Domain d3ab5a_: 3ab5 A: [171912]
        automated match to d4fxca_
        complexed with fes
      2. 1894181Domain d3ab5b_: 3ab5 B: [171913]
        automated match to d4fxca_
        complexed with fes
    2. Domain for 3wcq:
  4. 1894182Human (Homo sapiens) [TaxId:9606] [189528] (5 PDB entries)
    1. Domains for 3n9y:
      1. 1894185Domain d3n9yc_: 3n9y C: [182107]
        automated match to d1e6eb_
        complexed with clr, fes, hem
      2. 1894186Domain d3n9yd_: 3n9y D: [182108]
        automated match to d1e6eb_
        complexed with clr, fes, hem
    2. Domains for 3n9z:
      1. 1894187Domain d3n9zc_: 3n9z C: [182109]
        automated match to d1e6eb_
        complexed with fes, hc9, hem
      2. 1894188Domain d3n9zd_: 3n9z D: [182110]
        automated match to d1e6eb_
        complexed with fes, hc9, hem
    3. Domains for 3na0:
      1. 1894197Domain d3na0c_: 3na0 C: [232993]
        automated match to d3n9yc_
        complexed with 2dc, fes, hem
      2. 1894198Domain d3na0d_: 3na0 D: [232994]
        automated match to d3n9yc_
        complexed with 2dc, fes, hem
    4. Domains for 3na1:
      1. 1894183Domain d3na1c_: 3na1 C: [182111]
        automated match to d1e6eb_
        complexed with fes, hcd, hem
      2. 1894184Domain d3na1d_: 3na1 D: [182112]
        automated match to d1e6eb_
        complexed with fes, hcd, hem
    5. Domains for 3p1m:
      1. 1894189Domain d3p1ma_: 3p1m A: [183454]
        automated match to d1e6eb_
        complexed with fes, flc, gol, k
      2. 1894190Domain d3p1mb_: 3p1m B: [183455]
        automated match to d1e6eb_
        complexed with fes, flc, gol, k
      3. 1894191Domain d3p1mc_: 3p1m C: [183456]
        automated match to d1e6eb_
        complexed with fes, flc, gol, k
      4. 1894192Domain d3p1md_: 3p1m D: [183457]
        automated match to d1e6eb_
        complexed with fes, flc, gol, k
      5. 1894193Domain d3p1me_: 3p1m E: [183458]
        automated match to d1e6eb_
        complexed with fes, flc, gol, k
      6. 1894194Domain d3p1mf_: 3p1m F: [183459]
        automated match to d1e6eb_
        complexed with fes, flc, gol, k
      7. 1894195Domain d3p1mg_: 3p1m G: [183460]
        automated match to d1e6eb_
        complexed with fes, flc, gol, k
      8. 1894196Domain d3p1mh_: 3p1m H: [183461]
        automated match to d1e6eb_
        complexed with fes, flc, gol, k
  5. 1894199Leptolyngbya boryana [TaxId:1184] [195189] (1 PDB entry)
  6. 1894202Mastigocladus laminosus [TaxId:83541] [188017] (2 PDB entries)
    1. Domains for 1rfk:
      1. 1894203Domain d1rfka_: 1rfk A: [161682]
        automated match to d1j7aa_
        complexed with fes
      2. 1894204Domain d1rfkb_: 1rfk B: [161683]
        automated match to d1j7aa_
        complexed with fes
    2. Domains for 3p63:
      1. 1894205Domain d3p63a_: 3p63 A: [183547]
        automated match to d1czpa_
        complexed with fes
      2. 1894206Domain d3p63b_: 3p63 B: [183548]
        automated match to d1czpa_
        complexed with fes
  7. 1894207Synechocystis sp. [TaxId:1143] [187346] (1 PDB entry)
  8. 1894209Synechocystis sp. [TaxId:1148] [255333] (1 PDB entry)

More info for Protein automated matches from d.15.4.1: 2Fe-2S ferredoxin-related

Timeline for Protein automated matches from d.15.4.1: 2Fe-2S ferredoxin-related: