Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2158219Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2159798Superfamily d.15.4: 2Fe-2S ferredoxin-like [54292] (3 families) (S)
  5. 2159799Family d.15.4.1: 2Fe-2S ferredoxin-related [54293] (4 protein domains)
  6. 2159928Protein automated matches [190231] (9 species)
    not a true protein

Species:

  1. 2159929Anabaena sp. [311173] (2 PDB entries)
    1. Domain for 1qod:
    2. Domain for 1qoe:
  2. 2159932Aphanothece sacrum [TaxId:1122] [189862] (1 PDB entry)
  3. 2159937Cow (Bos taurus) [TaxId:9913] [186995] (1 PDB entry)
  4. 2159940Cyanidioschyzon merolae [TaxId:45157] [189509] (2 PDB entries)
    1. Domains for 3ab5:
      1. 2159942Domain d3ab5a_: 3ab5 A: [171912]
        automated match to d4fxca_
        complexed with fes
      2. 2159943Domain d3ab5b_: 3ab5 B: [171913]
        automated match to d4fxca_
        complexed with fes
    2. Domain for 3wcq:
  5. 2159944Human (Homo sapiens) [TaxId:9606] [189528] (5 PDB entries)
    1. Domains for 3n9y:
      1. 2159947Domain d3n9yc_: 3n9y C: [182107]
        Other proteins in same PDB: d3n9ya_, d3n9yb_
        automated match to d1e6eb_
        complexed with clr, fes, hem
      2. 2159948Domain d3n9yd_: 3n9y D: [182108]
        Other proteins in same PDB: d3n9ya_, d3n9yb_
        automated match to d1e6eb_
        complexed with clr, fes, hem
    2. Domains for 3n9z:
      1. 2159949Domain d3n9zc_: 3n9z C: [182109]
        Other proteins in same PDB: d3n9za_, d3n9zb_
        automated match to d1e6eb_
        complexed with fes, hc9, hem
      2. 2159950Domain d3n9zd_: 3n9z D: [182110]
        Other proteins in same PDB: d3n9za_, d3n9zb_
        automated match to d1e6eb_
        complexed with fes, hc9, hem
    3. Domains for 3na0:
      1. 2159959Domain d3na0c_: 3na0 C: [232993]
        Other proteins in same PDB: d3na0a_, d3na0b_
        automated match to d3n9yc_
        complexed with 2dc, fes, hem
      2. 2159960Domain d3na0d_: 3na0 D: [232994]
        Other proteins in same PDB: d3na0a_, d3na0b_
        automated match to d3n9yc_
        complexed with 2dc, fes, hem
    4. Domains for 3na1:
      1. 2159945Domain d3na1c_: 3na1 C: [182111]
        Other proteins in same PDB: d3na1a_, d3na1b_
        automated match to d1e6eb_
        complexed with fes, hcd, hem
      2. 2159946Domain d3na1d_: 3na1 D: [182112]
        Other proteins in same PDB: d3na1a_, d3na1b_
        automated match to d1e6eb_
        complexed with fes, hcd, hem
    5. Domains for 3p1m:
      1. 2159951Domain d3p1ma1: 3p1m A:66-184 [183454]
        Other proteins in same PDB: d3p1ma2, d3p1mb2, d3p1mc2, d3p1md2, d3p1me2, d3p1mf2, d3p1mg2, d3p1mh2
        automated match to d1e6eb_
        complexed with fes, flc, gol, k
      2. 2159952Domain d3p1mb1: 3p1m B:66-184 [183455]
        Other proteins in same PDB: d3p1ma2, d3p1mb2, d3p1mc2, d3p1md2, d3p1me2, d3p1mf2, d3p1mg2, d3p1mh2
        automated match to d1e6eb_
        complexed with fes, flc, gol, k
      3. 2159953Domain d3p1mc1: 3p1m C:65-184 [183456]
        Other proteins in same PDB: d3p1ma2, d3p1mb2, d3p1mc2, d3p1md2, d3p1me2, d3p1mf2, d3p1mg2, d3p1mh2
        automated match to d1e6eb_
        complexed with fes, flc, gol, k
      4. 2159954Domain d3p1md1: 3p1m D:65-184 [183457]
        Other proteins in same PDB: d3p1ma2, d3p1mb2, d3p1mc2, d3p1md2, d3p1me2, d3p1mf2, d3p1mg2, d3p1mh2
        automated match to d1e6eb_
        complexed with fes, flc, gol, k
      5. 2159955Domain d3p1me1: 3p1m E:65-184 [183458]
        Other proteins in same PDB: d3p1ma2, d3p1mb2, d3p1mc2, d3p1md2, d3p1me2, d3p1mf2, d3p1mg2, d3p1mh2
        automated match to d1e6eb_
        complexed with fes, flc, gol, k
      6. 2159956Domain d3p1mf1: 3p1m F:64-184 [183459]
        Other proteins in same PDB: d3p1ma2, d3p1mb2, d3p1mc2, d3p1md2, d3p1me2, d3p1mf2, d3p1mg2, d3p1mh2
        automated match to d1e6eb_
        complexed with fes, flc, gol, k
      7. 2159957Domain d3p1mg1: 3p1m G:64-184 [183460]
        Other proteins in same PDB: d3p1ma2, d3p1mb2, d3p1mc2, d3p1md2, d3p1me2, d3p1mf2, d3p1mg2, d3p1mh2
        automated match to d1e6eb_
        complexed with fes, flc, gol, k
      8. 2159958Domain d3p1mh1: 3p1m H:64-184 [183461]
        Other proteins in same PDB: d3p1ma2, d3p1mb2, d3p1mc2, d3p1md2, d3p1me2, d3p1mf2, d3p1mg2, d3p1mh2
        automated match to d1e6eb_
        complexed with fes, flc, gol, k
  6. 2159961Leptolyngbya boryana [TaxId:1184] [195189] (1 PDB entry)
  7. 2159964Mastigocladus laminosus [TaxId:83541] [188017] (2 PDB entries)
    1. Domains for 1rfk:
      1. 2159965Domain d1rfka_: 1rfk A: [161682]
        automated match to d1j7aa_
        complexed with fes
      2. 2159966Domain d1rfkb_: 1rfk B: [161683]
        automated match to d1j7aa_
        complexed with fes
    2. Domains for 3p63:
      1. 2159967Domain d3p63a_: 3p63 A: [183547]
        automated match to d1czpa_
        complexed with fes
      2. 2159968Domain d3p63b_: 3p63 B: [183548]
        automated match to d1czpa_
        complexed with fes
  8. 2159969Synechocystis sp. [TaxId:1148] [255333] (1 PDB entry)
  9. 2285886Zea mays [TaxId:4577] [329187] (2 PDB entries)
    1. Domains for 5h57:
      1. 2285887Domain d5h57e_: 5h57 E: [329188]
        automated match to d2pvgc_
        complexed with fes
      2. 2285893Domain d5h57b_: 5h57 B: [329194]
        automated match to d2pvgc_
        complexed with fes
      3. 2285897Domain d5h57a_: 5h57 A: [329198]
        automated match to d2pvgc_
        complexed with fes
      4. 2285901Domain d5h57d_: 5h57 D: [329202]
        automated match to d2pvgc_
        complexed with fes
      5. 2285904Domain d5h57c_: 5h57 C: [329205]
        automated match to d2pvgc_
        complexed with fes
      6. 2285907Domain d5h57f_: 5h57 F: [329208]
        automated match to d2pvgc_
        complexed with fes
    2. Domain for 5h5j:

More info for Protein automated matches from d.15.4.1: 2Fe-2S ferredoxin-related

Timeline for Protein automated matches from d.15.4.1: 2Fe-2S ferredoxin-related: