Lineage for Protein: automated matches

  1. Root: SCOPe 2.02
  2. 1190016Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1218105Fold d.129: TBP-like [55944] (11 superfamilies)
    beta-alpha-beta(4)-alpha
  4. 1218323Superfamily d.129.3: Bet v1-like [55961] (11 families) (S)
    contains a single copy of this fold with a alpha-beta2 insertion after the first helix; there is a cavity between the beta-sheet and the long C-terminal helix
  5. 1218562Family d.129.3.0: automated matches [191339] (1 protein)
    not a true family
  6. 1218563Protein automated matches [190218] (6 species)
    not a true protein

Species:

  1. 1218564Celery (Apium graveolens) [TaxId:4045] [186978] (1 PDB entry)
  2. 1218566Hypericum perforatum [TaxId:65561] [189103] (1 PDB entry)
  3. 1218569Medicago truncatula [TaxId:3880] [194255] (2 PDB entries)
    1. Domain for 3us7:
    2. Domain for 4jhg:
  4. 1218572Mung bean (Vigna radiata) [TaxId:157791] [187717] (2 PDB entries)
    1. Domains for 2flh:
      1. 1218573Domain d2flha_: 2flh A: [164428]
        automated match to d1fm4a_
        complexed with na, zea
      2. 1218574Domain d2flhb_: 2flh B: [164429]
        automated match to d1fm4a_
        complexed with na, zea
      3. 1218575Domain d2flhc_: 2flh C: [164430]
        automated match to d1fm4a_
        complexed with na, zea
      4. 1218576Domain d2flhd_: 2flh D: [164431]
        automated match to d1fm4a_
        complexed with na, zea
    2. Domains for 3c0v:
      1. 1218577Domain d3c0va_: 3c0v A: [172977]
        automated match to d1fm4a_
        complexed with epe, na, tbr, zea
      2. 1218578Domain d3c0vb_: 3c0v B: [172978]
        automated match to d1fm4a_
        complexed with epe, na, tbr, zea
      3. 1218579Domain d3c0vc_: 3c0v C: [172979]
        automated match to d1fm4a_
        complexed with epe, na, tbr, zea
      4. 1218580Domain d3c0vd_: 3c0v D: [172980]
        automated match to d1fm4a_
        complexed with epe, na, tbr, zea
  5. 1218581Mycobacterium smegmatis [TaxId:246196] [189822] (1 PDB entry)
  6. 1218584Streptomyces coelicolor [TaxId:1902] [195657] (1 PDB entry)

More info for Protein automated matches from d.129.3.0: automated matches

Timeline for Protein automated matches from d.129.3.0: automated matches: