Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2208465Fold d.167: Peptide deformylase [56419] (1 superfamily)
    alpha-beta(5)-alpha; 3 layers: a/b/a; meander beta-sheet wraps around the C-terminal alpha-helix
  4. 2208466Superfamily d.167.1: Peptide deformylase [56420] (2 families) (S)
    nickel-dependent enzyme
  5. 2208467Family d.167.1.1: Peptide deformylase [56421] (2 protein domains)
    automatically mapped to Pfam PF01327
  6. 2208586Protein automated matches [190200] (9 species)
    not a true protein

Species:

  1. 2208587Bacillus cereus [TaxId:226900] [188316] (1 PDB entry)
  2. 2208590Enterococcus faecium [TaxId:1352] [226815] (1 PDB entry)
  3. 2208593Escherichia coli [TaxId:469008] [194798] (3 PDB entries)
    1. Domains for 4al2:
      1. 2208596Domain d4al2a_: 4al2 A: [219016]
        automated match to d4az4a_
        complexed with h2s, ni
      2. 2208597Domain d4al2b_: 4al2 B: [219017]
        automated match to d4az4a_
        complexed with h2s, ni
      3. 2208598Domain d4al2c_: 4al2 C: [219018]
        automated match to d4az4a_
        complexed with h2s, ni
    2. Domain for 4al3:
    3. Domain for 4az4:
  4. 2208599Haemophilus influenzae [TaxId:281310] [279491] (2 PDB entries)
    1. Domains for 4wxk:
      1. 2208600Domain d4wxka_: 4wxk A: [279492]
        automated match to d1bs4a_
        complexed with gol, ni
      2. 2208601Domain d4wxkb_: 4wxk B: [279493]
        automated match to d1bs4a_
        complexed with gol, ni
      3. 2208602Domain d4wxkc_: 4wxk C: [279495]
        automated match to d1bs4a_
        complexed with gol, ni
      4. 2208603Domain d4wxkd_: 4wxk D: [279496]
        automated match to d1bs4a_
        complexed with gol, ni
    2. Domains for 4wxl:
      1. 2208604Domain d4wxla_: 4wxl A: [279494]
        automated match to d1bs4a_
        complexed with bb2, ni
      2. 2208605Domain d4wxlb_: 4wxl B: [279499]
        automated match to d1bs4a_
        complexed with bb2, ni
      3. 2208606Domain d4wxlc_: 4wxl C: [279498]
        automated match to d1bs4a_
        complexed with bb2, ni
      4. 2208607Domain d4wxld_: 4wxl D: [279497]
        automated match to d1bs4a_
        complexed with bb2, ni
  5. 2208608Staphylococcus aureus [TaxId:1280] [186945] (1 PDB entry)
  6. 2208611Staphylococcus aureus [TaxId:93062] [192454] (4 PDB entries)
    1. Domain for 3u7k:
    2. Domain for 3u7l:
    3. Domain for 3u7m:
    4. Domain for 3u7n:
  7. 2208616Streptococcus mutans [TaxId:210007] [255922] (1 PDB entry)
  8. 2208618Vibrio cholerae [TaxId:345073] [188814] (1 PDB entry)
  9. 2283335Streptococcus agalactiae [TaxId:1311] [326636] (10 PDB entries)
    1. Domain for 5jex:
    2. Domain for 5jey:
    3. Domain for 5jf1:
    4. Domain for 5jf2:
    5. Domain for 5jf3:
    6. Domain for 5jf4:
    7. Domain for 5jf5:
    8. Domain for 5jf6:
    9. Domain for 5jf7:
    10. Domain for 5jf8:

More info for Protein automated matches from d.167.1.1: Peptide deformylase

Timeline for Protein automated matches from d.167.1.1: Peptide deformylase: