Lineage for Protein: automated matches

  1. Root: SCOPe 2.01
  2. 968085Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
  3. 998539Fold c.60: Phosphoglycerate mutase-like [53253] (1 superfamily)
    core: 3 layers, a/b/a; mixed beta-sheet of 6 strands, order 324156; strand 5 is antiparallel to the rest
  4. 998540Superfamily c.60.1: Phosphoglycerate mutase-like [53254] (3 families) (S)
  5. 998541Family c.60.1.1: Cofactor-dependent phosphoglycerate mutase [53255] (4 proteins)
  6. 998593Protein automated matches [190196] (7 species)
    not a true protein

Species:

  1. 998594Burkholderia pseudomallei [TaxId:28450] [188843] (3 PDB entries)
    1. Domains for 3gp3:
      1. 998595Domain d3gp3a_: 3gp3 A: [176797]
        automated match to d1e59a_
        complexed with pg4, po3, sep
      2. 998596Domain d3gp3b_: 3gp3 B: [176798]
        automated match to d1e59a_
        complexed with pg4, po3, sep
      3. 998597Domain d3gp3c_: 3gp3 C: [176799]
        automated match to d1e59a_
        complexed with pg4, po3, sep
      4. 998598Domain d3gp3d_: 3gp3 D: [176800]
        automated match to d1e59a_
        complexed with pg4, po3, sep
    2. Domains for 3gp5:
      1. 998601Domain d3gp5a_: 3gp5 A: [176801]
        automated match to d1e59a_
        complexed with 3pg, pg4, pg6, vo4
      2. 998602Domain d3gp5b_: 3gp5 B: [176802]
        automated match to d1e59a_
        complexed with 3pg, pg4, pg6, vo4
    3. Domains for 3gw8:
      1. 998599Domain d3gw8a_: 3gw8 A: [177057]
        automated match to d1e59a_
        complexed with gol, pg4, vo4
      2. 998600Domain d3gw8b_: 3gw8 B: [177058]
        automated match to d1e59a_
        complexed with gol, pg4, vo4
  2. 998603Burkholderia pseudomallei [TaxId:320372] [188661] (3 PDB entries)
    1. Domains for 3ezn:
      1. 998604Domain d3ezna_: 3ezn A: [175328]
        automated match to d1e59a_
        complexed with pg4
      2. 998605Domain d3eznb_: 3ezn B: [175329]
        automated match to d1e59a_
        complexed with pg4
    2. Domains for 3fdz:
      1. 998608Domain d3fdza_: 3fdz A: [175717]
        automated match to d1e59a_
        complexed with 3pg, dg2, peg
      2. 998609Domain d3fdzb_: 3fdz B: [175718]
        automated match to d1e59a_
        complexed with 3pg, dg2, peg
    3. Domains for 3lnt:
      1. 998606Domain d3lnta_: 3lnt A: [180424]
        automated match to d1e59a_
        complexed with edo, mli, na
      2. 998607Domain d3lntb_: 3lnt B: [180425]
        automated match to d1e59a_
        complexed with edo, mli, na
  3. 998610Cryptosporidium parvum [TaxId:353152] [188494] (1 PDB entry)
  4. 998613Human (Homo sapiens) [TaxId:9606] [186938] (9 PDB entries)
    1. Domains for 1yfk:
      1. 998628Domain d1yfka_: 1yfk A: [162191]
        automated match to d1e58a_
        complexed with cit, cl
      2. 998629Domain d1yfkb_: 1yfk B: [162192]
        automated match to d1e58a_
        complexed with cit, cl
    2. Domains for 1yjx:
      1. 998630Domain d1yjxa_: 1yjx A: [162219]
        automated match to d1e58a_
        complexed with cit, cl
      2. 998631Domain d1yjxb_: 1yjx B: [162220]
        automated match to d1e58a_
        complexed with cit, cl
      3. 998632Domain d1yjxc_: 1yjx C: [162221]
        automated match to d1e58a_
        complexed with cit, cl
      4. 998633Domain d1yjxd_: 1yjx D: [162222]
        automated match to d1e58a_
        complexed with cit, cl
      5. 998634Domain d1yjxe_: 1yjx E: [162223]
        automated match to d1e58a_
        complexed with cit, cl
      6. 998635Domain d1yjxf_: 1yjx F: [162224]
        automated match to d1e58a_
        complexed with cit, cl
      7. 998636Domain d1yjxg_: 1yjx G: [162225]
        automated match to d1e58a_
        complexed with cit, cl
      8. 998637Domain d1yjxh_: 1yjx H: [162226]
        automated match to d1e58a_
        complexed with cit, cl
      9. 998638Domain d1yjxi_: 1yjx I: [162227]
        automated match to d1e58a_
        complexed with cit, cl
      10. 998639Domain d1yjxj_: 1yjx J: [162228]
        automated match to d1e58a_
        complexed with cit, cl
      11. 998640Domain d1yjxk_: 1yjx K: [162229]
        automated match to d1e58a_
        complexed with cit, cl
      12. 998641Domain d1yjxl_: 1yjx L: [162230]
        automated match to d1e58a_
        complexed with cit, cl
    3. Domains for 2a9j:
      1. 998626Domain d2a9ja_: 2a9j A: [126440]
        automated match to d1t8pa_
        complexed with 3pg
      2. 998627Domain d2a9jb_: 2a9j B: [126441]
        automated match to d1t8pa_
        complexed with 3pg
    4. Domains for 2f90:
      1. 998620Domain d2f90a_: 2f90 A: [133148]
        automated match to d1t8pa_
        complexed with 3pg, alf
      2. 998621Domain d2f90b_: 2f90 B: [133149]
        automated match to d1t8pa_
        complexed with 3pg, alf
    5. Domains for 2h4x:
      1. 998616Domain d2h4xa_: 2h4x A: [136086]
        automated match to d1t8pa_
        complexed with 3pg
      2. 998617Domain d2h4xb_: 2h4x B: [136087]
        automated match to d1t8pa_
        complexed with 3pg
    6. Domains for 2h4z:
      1. 998622Domain d2h4za_: 2h4z A: [136088]
        automated match to d1t8pa_
        complexed with dg2
      2. 998623Domain d2h4zb_: 2h4z B: [136089]
        automated match to d1t8pa_
        complexed with dg2
    7. Domains for 2h52:
      1. 998618Domain d2h52a_: 2h52 A: [136114]
        automated match to d1t8pa_
        complexed with 3pg, hai
      2. 998619Domain d2h52b_: 2h52 B: [136115]
        automated match to d1t8pa_
        complexed with 3pg, hai
    8. Domains for 2hhj:
      1. 998614Domain d2hhja_: 2hhj A: [136497]
        automated match to d1t8pa_
        complexed with 3pg, dg2, hai
      2. 998615Domain d2hhjb_: 2hhj B: [136498]
        automated match to d1t8pa_
        complexed with 3pg, dg2, hai
    9. Domains for 3nfy:
      1. 998624Domain d3nfya_: 3nfy A: [182241]
        automated match to d1t8pa_
      2. 998625Domain d3nfyb_: 3nfy B: [182242]
        automated match to d1t8pa_
  5. 998642Plasmodium falciparum [TaxId:36329] [189120] (1 PDB entry)
  6. 998644Thermus thermophilus [TaxId:274] [187977] (7 PDB entries)
    1. Domain for 1v7q:
    2. Domains for 2eoa:
      1. 998650Domain d2eoaa_: 2eoa A: [164185]
        automated match to d1v37a_
      2. 998651Domain d2eoab_: 2eoa B: [164186]
        automated match to d1v37a_
    3. Domain for 2p2y:
    4. Domains for 2p2z:
      1. 998648Domain d2p2za_: 2p2z A: [166979]
        automated match to d1v37a_
        complexed with gol, na
      2. 998649Domain d2p2zb_: 2p2z B: [166980]
        automated match to d1v37a_
        complexed with gol, na
    5. Domain for 2p30:
    6. Domains for 2p6m:
      1. 998652Domain d2p6ma_: 2p6m A: [167035]
        automated match to d1v37a_
        complexed with gol, na
      2. 998653Domain d2p6mb_: 2p6m B: [167036]
        automated match to d1v37a_
        complexed with gol, na
    7. Domains for 2p9f:
      1. 998646Domain d2p9fa_: 2p9f A: [167085]
        automated match to d1v37a_
        complexed with gol
      2. 998647Domain d2p9fb_: 2p9f B: [167086]
        automated match to d1v37a_
        complexed with gol
  7. 998656Thermus thermophilus [TaxId:300852] [187129] (15 PDB entries)
    1. Domains for 2ekb:
      1. 998668Domain d2ekba_: 2ekb A: [164129]
        automated match to d1v37a_
        complexed with na
      2. 998669Domain d2ekbb_: 2ekb B: [164130]
        automated match to d1v37a_
        complexed with na
    2. Domains for 2ekz:
      1. 998674Domain d2ekza_: 2ekz A: [164147]
        automated match to d1v37a_
      2. 998675Domain d2ekzb_: 2ekz B: [164148]
        automated match to d1v37a_
    3. Domains for 2enu:
      1. 998660Domain d2enua_: 2enu A: [164173]
        automated match to d1v37a_
        complexed with gol; mutant
      2. 998661Domain d2enub_: 2enu B: [164174]
        automated match to d1v37a_
        complexed with gol; mutant
    4. Domains for 2enw:
      1. 998681Domain d2enwa_: 2enw A: [164175]
        automated match to d1v37a_
        complexed with gol; mutant
      2. 998682Domain d2enwb_: 2enw B: [164176]
        automated match to d1v37a_
        complexed with gol; mutant
    5. Domain for 2hia:
    6. Domains for 2owd:
      1. 998662Domain d2owda_: 2owd A: [166874]
        automated match to d1v37a_
        complexed with gol, na
      2. 998663Domain d2owdb_: 2owd B: [166875]
        automated match to d1v37a_
        complexed with gol, na
    7. Domain for 2owe:
    8. Domains for 2p6o:
      1. 998657Domain d2p6oa_: 2p6o A: [167037]
        automated match to d1v37a_
      2. 998658Domain d2p6ob_: 2p6o B: [167038]
        automated match to d1v37a_
    9. Domains for 2p75:
      1. 998664Domain d2p75a_: 2p75 A: [167044]
        automated match to d1v37a_
        complexed with gol, na
      2. 998665Domain d2p75b_: 2p75 B: [167045]
        automated match to d1v37a_
        complexed with gol, na
    10. Domains for 2p77:
      1. 998677Domain d2p77a_: 2p77 A: [167046]
        automated match to d1v37a_
        complexed with gol, na
      2. 998678Domain d2p77b_: 2p77 B: [167047]
        automated match to d1v37a_
        complexed with gol, na
    11. Domains for 2p78:
      1. 998672Domain d2p78a_: 2p78 A: [167048]
        automated match to d1v37a_
        complexed with gol, na
      2. 998673Domain d2p78b_: 2p78 B: [167049]
        automated match to d1v37a_
        complexed with gol, na
    12. Domains for 2p79:
      1. 998670Domain d2p79a_: 2p79 A: [167050]
        automated match to d1v37a_
        complexed with gol, na
      2. 998671Domain d2p79b_: 2p79 B: [167051]
        automated match to d1v37a_
        complexed with gol, na
    13. Domains for 2p9y:
      1. 998679Domain d2p9ya_: 2p9y A: [167090]
        automated match to d1v37a_
        complexed with gol, na
      2. 998680Domain d2p9yb_: 2p9y B: [167091]
        automated match to d1v37a_
        complexed with gol, na
    14. Domains for 2p9z:
      1. 998666Domain d2p9za_: 2p9z A: [167092]
        automated match to d1v37a_
        complexed with gol, na
      2. 998667Domain d2p9zb_: 2p9z B: [167093]
        automated match to d1v37a_
        complexed with gol, na
    15. Domains for 2pa0:
      1. 998683Domain d2pa0a_: 2pa0 A: [167094]
        automated match to d1v37a_
        complexed with cl, gol, na
      2. 998684Domain d2pa0b_: 2pa0 B: [167095]
        automated match to d1v37a_
        complexed with cl, gol, na

More info for Protein automated matches from c.60.1.1: Cofactor-dependent phosphoglycerate mutase

Timeline for Protein automated matches from c.60.1.1: Cofactor-dependent phosphoglycerate mutase:

  • Protein automated matches from c.60.1.1: Cofactor-dependent phosphoglycerate mutase is new in SCOPe 2.01-stable
  • Protein automated matches from c.60.1.1: Cofactor-dependent phosphoglycerate mutase appears in SCOPe 2.02
  • Protein automated matches from c.60.1.1: Cofactor-dependent phosphoglycerate mutase appears in the current release, SCOPe 2.07