Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2089713Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2114715Fold c.23: Flavodoxin-like [52171] (15 superfamilies)
    3 layers, a/b/a; parallel beta-sheet of 5 strand, order 21345
  4. 2114716Superfamily c.23.1: CheY-like [52172] (8 families) (S)
  5. 2114717Family c.23.1.1: CheY-related [52173] (26 proteins)
  6. 2114998Protein automated matches [190177] (7 species)
    not a true protein

Species:

  1. 2114999Bacillus subtilis [TaxId:1423] [189041] (1 PDB entry)
  2. 2115002Bacillus subtilis [TaxId:224308] [189247] (1 PDB entry)
  3. 2115004Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [187251] (1 PDB entry)
  4. 2115006Escherichia coli K-12 [TaxId:83333] [189043] (17 PDB entries)
    1. Domain for 2lp4:
    2. Domains for 3f7n:
      1. 2115015Domain d3f7na_: 3f7n A: [175547]
        automated match to d1a0oa_
        complexed with bef, gol, mn, so4; mutant
      2. 2115016Domain d3f7nb_: 3f7n B: [175548]
        automated match to d1a0oa_
        complexed with bef, gol, mn, so4; mutant
    3. Domains for 3fft:
      1. 2115029Domain d3ffta_: 3fft A: [175760]
        automated match to d1a0oa_
        complexed with bef, gol, mn, so4; mutant
      2. 2115030Domain d3fftb_: 3fft B: [175761]
        automated match to d1a0oa_
        complexed with bef, gol, mn, so4; mutant
    4. Domains for 3ffw:
      1. 2115013Domain d3ffwa_: 3ffw A: [175762]
        automated match to d1miha_
        complexed with bef, gol, mn, so4; mutant
      2. 2115014Domain d3ffwb_: 3ffw B: [175763]
        automated match to d1miha_
        complexed with bef, gol, mn, so4; mutant
    5. Domains for 3ffx:
      1. 2115019Domain d3ffxa_: 3ffx A: [175764]
        automated match to d1miha_
        complexed with bef, gol, mn, so4; mutant
      2. 2115020Domain d3ffxb_: 3ffx B: [175765]
        automated match to d1miha_
        complexed with bef, gol, mn, so4; mutant
    6. Domains for 3fgz:
      1. 2115021Domain d3fgza_: 3fgz A: [175778]
        automated match to d1miha_
        complexed with bef, gol, mn, nh4; mutant
      2. 2115022Domain d3fgzb_: 3fgz B: [175779]
        automated match to d1miha_
        complexed with bef, gol, mn, nh4; mutant
    7. Domains for 3myy:
      1. 2115025Domain d3myya_: 3myy A: [181718]
        automated match to d1a0oa_
        complexed with bef, gol, mn, so4; mutant
      2. 2115026Domain d3myyb_: 3myy B: [181719]
        automated match to d1a0oa_
        complexed with bef, gol, mn, so4; mutant
    8. Domains for 3rvj:
      1. 2115027Domain d3rvja1: 3rvj A:1-129 [195429]
        Other proteins in same PDB: d3rvja2, d3rvjb2
        automated match to d1djma_
        complexed with bef, gol, mn, so4
      2. 2115028Domain d3rvjb1: 3rvj B:1-129 [195431]
        Other proteins in same PDB: d3rvja2, d3rvjb2
        automated match to d1djma_
        complexed with bef, gol, mn, so4
    9. Domain for 3rvk:
    10. Domains for 3rvl:
      1. 2115011Domain d3rvla_: 3rvl A: [216085]
        automated match to d3rvra_
        complexed with bef, gol, mn, so4
      2. 2115012Domain d3rvlb_: 3rvl B: [216086]
        automated match to d3rvra_
        complexed with bef, gol, mn, so4
    11. Domain for 3rvm:
    12. Domains for 3rvn:
      1. 2115031Domain d3rvna1: 3rvn A:1-129 [195440]
        Other proteins in same PDB: d3rvna2, d3rvnb2
        automated match to d1djma_
        complexed with bef, gol, mn, so4
      2. 2115032Domain d3rvnb1: 3rvn B:1-129 [200536]
        Other proteins in same PDB: d3rvna2, d3rvnb2
        automated match to d3rvna_
        complexed with bef, gol, mn, so4
    13. Domain for 3rvo:
    14. Domains for 3rvp:
      1. 2115033Domain d3rvpa1: 3rvp A:1-129 [216089]
        Other proteins in same PDB: d3rvpa2, d3rvpb2
        automated match to d3rvqa_
        complexed with bef, gol, mg, mn, so4
      2. 2115034Domain d3rvpb1: 3rvp B:1-129 [216090]
        Other proteins in same PDB: d3rvpa2, d3rvpb2
        automated match to d3rvqa_
        complexed with bef, gol, mg, mn, so4
    15. Domain for 3rvq:
    16. Domains for 3rvr:
      1. 2115023Domain d3rvra1: 3rvr A:1-129 [195430]
        Other proteins in same PDB: d3rvra2, d3rvrb2
        automated match to d1djma_
        complexed with gol, mn, moo, so4
      2. 2115024Domain d3rvrb1: 3rvr B:1-129 [195428]
        Other proteins in same PDB: d3rvra2, d3rvrb2
        automated match to d1djma_
        complexed with gol, mn, moo, so4
    17. Domains for 3rvs:
      1. 2115017Domain d3rvsa1: 3rvs A:1-129 [216091]
        Other proteins in same PDB: d3rvsa2, d3rvsb2
        automated match to d3rvra_
        complexed with gol, mn, so4, wo4
      2. 2115018Domain d3rvsb1: 3rvs B:1-129 [216092]
        Other proteins in same PDB: d3rvsa2, d3rvsb2
        automated match to d3rvra_
        complexed with gol, mn, so4, wo4
  5. 2115036Escherichia coli [TaxId:562] [186909] (5 PDB entries)
    1. Domains for 1zes:
      1. 2115041Domain d1zesa_: 1zes A: [124994]
        automated match to d1b00a_
        complexed with bef, mg
      2. 2115042Domain d1zesb_: 1zes B: [124995]
        automated match to d1b00a_
        complexed with bef, mg
      3. 2115043Domain d1zesc_: 1zes C: [124996]
        automated match to d1b00a_
        complexed with bef, mg
    2. Domains for 2iyn:
      1. 2115046Domain d2iyna_: 2iyn A: [137803]
        automated match to d1b00a_
        complexed with mg
      2. 2115047Domain d2iynb_: 2iyn B: [137804]
        automated match to d1b00a_
        complexed with mg
      3. 2115048Domain d2iync_: 2iyn C: [137805]
        automated match to d1b00a_
        complexed with mg
    3. Domains for 2j8e:
      1. 2115044Domain d2j8ea_: 2j8e A: [304105]
        automated match to d3fgza_
        complexed with bef, gol, mn, nh4
      2. 2115045Domain d2j8eb_: 2j8e B: [304106]
        automated match to d3fgza_
        complexed with bef, gol, mn, nh4
    4. Domains for 2jb9:
      1. 2115039Domain d2jb9a_: 2jb9 A: [165980]
        automated match to d1b00a_
        mutant
      2. 2115040Domain d2jb9b_: 2jb9 B: [165981]
        automated match to d1b00a_
        mutant
    5. Domains for 2jba:
      1. 2115037Domain d2jbaa_: 2jba A: [165982]
        automated match to d1b00a_
        complexed with na, trs; mutant
      2. 2115038Domain d2jbab_: 2jba B: [165983]
        automated match to d1b00a_
        complexed with na, trs; mutant
  6. 2115049Escherichia coli [TaxId:83334] [313252] (3 PDB entries)
    1. Domains for 5d2c:
      1. 2115054Domain d5d2ca_: 5d2c A: [313342]
        automated match to d3ffwa_
      2. 2115055Domain d5d2cb_: 5d2c B: [313253]
        automated match to d3ffwa_
    2. Domains for 5dgc:
      1. 2115052Domain d5dgca_: 5dgc A: [314507]
        automated match to d3ffwa_
        complexed with bef, cl, gol, imd, mn
      2. 2115053Domain d5dgcb_: 5dgc B: [313600]
        automated match to d3ffwa_
        complexed with bef, cl, gol, imd, mn
    3. Domains for 5dkf:
      1. 2115050Domain d5dkfa_: 5dkf A: [313639]
        automated match to d3ffwa_
        complexed with bef, gol, imd, mn
      2. 2115051Domain d5dkfb_: 5dkf B: [313642]
        automated match to d3ffwa_
        complexed with bef, gol, imd, mn
  7. 2115056Vibrio cholerae [TaxId:666] [194701] (5 PDB entries)
    1. Domain for 3to5:
    2. Domain for 4hnq:
    3. Domain for 4hns:
    4. Domain for 4jp1:
    5. Domain for 4lx8:

More info for Protein automated matches from c.23.1.1: CheY-related

Timeline for Protein automated matches from c.23.1.1: CheY-related: