Lineage for Protein: automated matches

  1. Root: SCOPe 2.01
  2. 929298Class b: All beta proteins [48724] (174 folds)
  3. 957981Fold b.60: Lipocalins [50813] (1 superfamily)
    barrel, closed or opened; n=8, S=12; meander
  4. 957982Superfamily b.60.1: Lipocalins [50814] (10 families) (S)
    bind hydrophobic ligands in their interior
  5. 957983Family b.60.1.1: Retinol binding protein-like [50815] (22 proteins)
    barrel, closed; n=8, S=12, meander
  6. 958311Protein automated matches [190163] (9 species)
    not a true protein

Species:

  1. 958312Brown ear tick (Rhipicephalus appendiculatus) [TaxId:34631] [189209] (2 PDB entries)
    1. Domains for 3g7x:
      1. 958313Domain d3g7xa_: 3g7x A: [176410]
        automated match to d1qfta_
        complexed with gol, hsm; mutant
      2. 958314Domain d3g7xb_: 3g7x B: [176411]
        automated match to d1qfta_
        complexed with gol, hsm; mutant
    2. Domains for 3gaq:
      1. 958315Domain d3gaqa_: 3gaq A: [176483]
        automated match to d1qfta_
        mutant
      2. 958316Domain d3gaqb_: 3gaq B: [176484]
        automated match to d1qfta_
        mutant
  2. 958317Chicken (Gallus gallus) [TaxId:9031] [189846] (1 PDB entry)
  3. 958320Cow (Bos taurus) [TaxId:9913] [188392] (1 PDB entry)
  4. 958322Escherichia coli [TaxId:562] [187394] (1 PDB entry)
  5. 958325Horse (Equus caballus) [TaxId:9796] [189576] (1 PDB entry)
  6. 958328Human (Homo sapiens) [TaxId:9606] [188452] (10 PDB entries)
    1. Domain for 2ova:
    2. Domain for 2ovd:
    3. Domain for 2ove:
    4. Domain for 2qos:
    5. Domain for 2rd7:
    6. Domain for 3bx7:
    7. Domains for 3bx8:
      1. 958337Domain d3bx8a_: 3bx8 A: [172895]
        automated match to d1ngla_
        complexed with 1pe, pe5
      2. 958338Domain d3bx8b_: 3bx8 B: [172896]
        automated match to d1ngla_
        complexed with 1pe, pe5
      3. 958339Domain d3bx8c_: 3bx8 C: [172897]
        automated match to d1ngla_
        complexed with 1pe, pe5
      4. 958340Domain d3bx8d_: 3bx8 D: [172898]
        automated match to d1ngla_
        complexed with 1pe, pe5
      5. 958341Domain d3bx8e_: 3bx8 E: [172899]
        automated match to d1ngla_
        complexed with 1pe, pe5
      6. 958342Domain d3bx8f_: 3bx8 F: [172900]
        automated match to d1ngla_
        complexed with 1pe, pe5
      7. 958343Domain d3bx8g_: 3bx8 G: [172901]
        automated match to d1ngla_
        complexed with 1pe, pe5
      8. 958344Domain d3bx8h_: 3bx8 H: [172902]
        automated match to d1ngla_
        complexed with 1pe, pe5
    8. Domains for 3dsz:
      1. 958333Domain d3dsza_: 3dsz A: [174216]
        automated match to d1ngla_
        complexed with liz, yt3
      2. 958334Domain d3dszb_: 3dsz B: [174217]
        automated match to d1ngla_
        complexed with liz, yt3
    9. Domain for 3ojy:
    10. Domains for 3tzs:
      1. 958345Domain d3tzsa_: 3tzs A: [186039]
        automated match to d1ngla_
        complexed with cl, edo, phu, so4; mutant
      2. 958346Domain d3tzsb_: 3tzs B: [186040]
        automated match to d1ngla_
        complexed with cl, edo, phu, so4; mutant
      3. 958347Domain d3tzsc_: 3tzs C: [186041]
        automated match to d1ngla_
        complexed with cl, edo, phu, so4; mutant
  7. 958349Mouse (Mus musculus) [TaxId:10090] [188249] (7 PDB entries)
    1. Domain for 2nnd:
    2. Domain for 2nne:
    3. Domain for 3kff:
    4. Domain for 3kfg:
    5. Domain for 3kfh:
    6. Domain for 3kfi:
    7. Domain for 3s26:
  8. 958357Reindeer (Rangifer tarandus) [TaxId:9870] [186888] (1 PDB entry)
  9. 958363Rhodnius prolixus [TaxId:13249] [187425] (1 PDB entry)

More info for Protein automated matches from b.60.1.1: Retinol binding protein-like

Timeline for Protein automated matches from b.60.1.1: Retinol binding protein-like: