Species:

1. Aquifex aeolicus [TaxId:63363] [187664] (3 PDB entries)

   1. Domains for 2egi:

      1. Domain d2egia_: 2egi A: [163999] automated match to d1z54a1 complexed with gol

      2. Domain d2egic_: 2egi C: [164000] automated match to d1z54a1 complexed with gol

      3. Domain d2egid_: 2egi D: [164001] automated match to d1z54a1 complexed with gol

      4. Domain d2egie_: 2egi E: [164002] automated match to d1z54a1 complexed with gol

      5. Domain d2egif_: 2egi F: [164003] automated match to d1z54a1 complexed with gol

      6. Domain d2egig_: 2egi G: [164004] automated match to d1z54a1 complexed with gol

      7. Domain d2egih_: 2egi H: [164005] automated match to d1z54a1 complexed with gol

      8. Domain d2egii_: 2egi I: [164006] automated match to d1z54a1 complexed with gol

   2. Domains for 2egj:

      1. Domain d2egja_: 2egj A: [164007] automated match to d1z54a1

      2. Domain d2egjb_: 2egj B: [164008] automated match to d1z54a1

   3. Domains for 2egr:

      1. Domain d2egra_: 2egr A: [164015] automated match to d1z54a1

      2. Domain d2egrb_: 2egr B: [164016] automated match to d1z54a1

2. Bacillus cereus [TaxId:1396] [186868] (1 PDB entry)

   • Domains for 1y7u:

     1. Domain d1y7ub_: 1y7u B: [122723] Other proteins in same PDB: d1y7ua1 automated match to d1vpma_ complexed with ca, coa, so4

     2. Domain d1y7uc_: 1y7u C: [122724] Other proteins in same PDB: d1y7ua1 automated match to d1vpma_ complexed with ca, coa, so4

3. Bartonella henselae [TaxId:38323] [255863] (1 PDB entry)

   • Domains for 3hm0:

     1. Domain d3hm0a_: 3hm0 A: [246506] automated match to d4k00a_

     2. Domain d3hm0b_: 3hm0 B: [246507] automated match to d4k00a_

     3. Domain d3hm0c_: 3hm0 C: [246508] automated match to d4k00a_

     4. Domain d3hm0d_: 3hm0 D: [246509] automated match to d4k00a_

4. Bordetella bronchiseptica [TaxId:518] [188610] (1 PDB entry)

   • Domains for 3e29:

     1. Domain d3e29a_: 3e29 A: [174551] automated match to d2f0xa1

     2. Domain d3e29b_: 3e29 B: [174552] automated match to d2f0xa1

     3. Domain d3e29c_: 3e29 C: [174553] automated match to d2f0xa1

     4. Domain d3e29d_: 3e29 D: [174554] automated match to d2f0xa1

5. Bordetella parapertussis [TaxId:519] [225507] (1 PDB entry)

   • Domains for 3dkz:

     1. Domain d3dkza_: 3dkz A: [209220] automated match to d1zkib_

     2. Domain d3dkzb_: 3dkz B: [209221] automated match to d1zkib_

6. Burkholderia thailandensis [TaxId:271848] [193479] (1 PDB entry)

   • Domains for 4h4g:

     1. Domain d4h4ga_: 4h4g A: [202358] automated match to d4h4gi_

     2. Domain d4h4gb_: 4h4g B: [202359] automated match to d4h4gi_

     3. Domain d4h4gc_: 4h4g C: [202360] automated match to d4h4gi_

     4. Domain d4h4gd_: 4h4g D: [202361] automated match to d4h4gi_

     5. Domain d4h4ge_: 4h4g E: [202362] automated match to d4h4gi_

     6. Domain d4h4gf_: 4h4g F: [202363] automated match to d4h4gi_

     7. Domain d4h4gg_: 4h4g G: [202364] automated match to d4h4gi_

     8. Domain d4h4gh_: 4h4g H: [202365] automated match to d4h4gi_

     9. Domain d4h4gi_: 4h4g I: [193480] automated match to d1u1zc_

7. Campylobacter jejuni [TaxId:354242] [188866] (1 PDB entry)

   • Domains for 3d6x:

     1. Domain d3d6xa_: 3d6x A: [173725] automated match to d1u1za_

     2. Domain d3d6xb_: 3d6x B: [173726] automated match to d1u1za_

     3. Domain d3d6xc_: 3d6x C: [173727] automated match to d1u1za_

     4. Domain d3d6xd_: 3d6x D: [173728] automated match to d1u1za_

     5. Domain d3d6xe_: 3d6x E: [173729] automated match to d1u1za_

     6. Domain d3d6xf_: 3d6x F: [173730] automated match to d1u1za_

8. Chlorobaculum tepidum [TaxId:194439] [189276] (1 PDB entry)

   • Domains for 3lmb:

     1. Domain d3lmba_: 3lmb A: [180379] automated match to d1t82a_

     2. Domain d3lmbb_: 3lmb B: [180380] automated match to d1t82a_

9. Cupriavidus necator [TaxId:264198] [225431] (1 PDB entry)

   • Domains for 3ck1:

     1. Domain d3ck1a_: 3ck1 A: [208886] automated match to d1s5ug_ complexed with cl, gol

     2. Domain d3ck1b_: 3ck1 B: [208887] automated match to d1s5ug_ complexed with cl, gol

10. Helicobacter pylori [TaxId:85962] [225438] (1 PDB entry)

    • Domains for 2pzh:

      1. Domain d2pzha_: 2pzh A: [205699] automated match to d1s5ug_

      2. Domain d2pzhb_: 2pzh B: [205700] automated match to d1s5ug_

      3. Domain d2pzhc_: 2pzh C: [205701] automated match to d1s5ug_

      4. Domain d2pzhd_: 2pzh D: [205702] automated match to d1s5ug_

11. Human (Homo sapiens) [TaxId:9606] [255571] (1 PDB entry)

    • Domains for 2qq2:

      1. Domain d2qq2a_: 2qq2 A: [243609] automated match to d1vpmb_

      2. Domain d2qq2b_: 2qq2 B: [243610] automated match to d1vpmb_

      3. Domain d2qq2c_: 2qq2 C: [243611] automated match to d1vpmb_

      4. Domain d2qq2d_: 2qq2 D: [243612] automated match to d1vpmb_

      5. Domain d2qq2e_: 2qq2 E: [243613] automated match to d1vpmb_

      6. Domain d2qq2f_: 2qq2 F: [243614] automated match to d1vpmb_

      7. Domain d2qq2g_: 2qq2 G: [243615] automated match to d1vpmb_

      8. Domain d2qq2h_: 2qq2 H: [243616] automated match to d1vpmb_

      9. Domain d2qq2i_: 2qq2 I: [243617] automated match to d1vpmb_

      10. Domain d2qq2j_: 2qq2 J: [243618] automated match to d1vpmb_

      11. Domain d2qq2k_: 2qq2 K: [243619] automated match to d1vpmb_

      12. Domain d2qq2l_: 2qq2 L: [243620] automated match to d1vpmb_

12. Mouse (Mus musculus) [TaxId:10090] [255553] (1 PDB entry)

    • Domains for 2q2b:

      1. Domain d2q2ba_: 2q2b A: [243519] automated match to d1vpmc_

      2. Domain d2q2bb_: 2q2b B: [243520] automated match to d1vpmc_

13. Mycobacterium tuberculosis [TaxId:1773] [189981] (1 PDB entry)

    • Domains for 3s4k:

      1. Domain d3s4ka_: 3s4k A: [185270] automated match to d1q4sa_ complexed with cl, edo, so4

      2. Domain d3s4kb_: 3s4k B: [185271] automated match to d1q4sa_ complexed with cl, edo, so4

14. Mycobacterium tuberculosis [TaxId:83332] [225798] (1 PDB entry)

    • Domains for 3khp:

      1. Domain d3khpc1: 3khp C:3-141 [212352] automated match to d1pn2a1 complexed with cl, tla

      2. Domain d3khpc2: 3khp C:161-289 [212353] automated match to d1pn2a2 complexed with cl, tla

      3. Domain d3khpd1: 3khp D:3-141 [212354] automated match to d1pn2a1 complexed with cl, tla

      4. Domain d3khpd2: 3khp D:161-289 [212355] automated match to d1pn2a2 complexed with cl, tla

15. Neisseria meningitidis [TaxId:272831] [193287] (2 PDB entries)

    1. Domains for 4i83:

       1. Domain d4i83a_: 4i83 A: [194131] automated match to d1z6ba1

       2. Domain d4i83b_: 4i83 B: [202586] automated match to d4i83c_

       3. Domain d4i83c_: 4i83 C: [194128] automated match to d1z6ba1

       4. Domain d4i83d_: 4i83 D: [202587] automated match to d4i83c_

       5. Domain d4i83e_: 4i83 E: [202588] automated match to d4i83c_

       6. Domain d4i83f_: 4i83 F: [202589] automated match to d4i83c_

    2. Domains for 4ien:

       1. Domain d4iena_: 4ien A: [202607] automated match to d4iend_ complexed with cl, coa, gdp

       2. Domain d4ienb_: 4ien B: [202608] automated match to d4iend_ complexed with cl, coa, gdp

       3. Domain d4ienc_: 4ien C: [202609] automated match to d4iend_ complexed with cl, coa, gdp

       4. Domain d4iend_: 4ien D: [193288] automated match to d1vpmc_ complexed with cl, coa, gdp

16. Photobacterium profundum [TaxId:74109] [196962] (2 PDB entries)

    1. Domain for 3r87:

       • Domain d3r87a_: 3r87 A: [215656] automated match to d4i45a_

    2. Domain for 4i45:

       • Domain d4i45a_: 4i45 A: [196963] automated match to d1s5ue_ complexed with mg

17. Silicibacter sp. [TaxId:292414] [231234] (1 PDB entry)

    • Domains for 2qwz:

      1. Domain d2qwza_: 2qwz A: [231235] automated match to d2h4ud_ complexed with act, gol

      2. Domain d2qwzb_: 2qwz B: [231236] automated match to d2h4ud_ complexed with act, gol

      3. Domain d2qwzc_: 2qwz C: [231237] automated match to d2h4ud_ complexed with act, gol

      4. Domain d2qwzd_: 2qwz D: [231238] automated match to d2h4ud_ complexed with act, gol

18. Sinorhizobium meliloti [TaxId:266834] [226406] (1 PDB entry)

    • Domains for 4ffu:

      1. Domain d4ffua_: 4ffu A: [221170] automated match to d1q6wc_ complexed with cl

      2. Domain d4ffub_: 4ffu B: [221171] automated match to d1q6wc_ complexed with cl

      3. Domain d4ffuc_: 4ffu C: [221172] automated match to d1q6wc_ complexed with cl

      4. Domain d4ffud_: 4ffu D: [221173] automated match to d1q6wc_ complexed with cl

      5. Domain d4ffue_: 4ffu E: [221174] automated match to d1q6wc_ complexed with cl

      6. Domain d4ffuf_: 4ffu F: [221175] automated match to d1q6wc_ complexed with cl

      7. Domain d4ffug_: 4ffu G: [221176] automated match to d1q6wc_ complexed with cl

      8. Domain d4ffuh_: 4ffu H: [221177] automated match to d1q6wc_ complexed with cl

      9. Domain d4ffui_: 4ffu I: [221178] automated match to d1q6wc_ complexed with cl

      10. Domain d4ffuj_: 4ffu J: [221179] automated match to d1q6wc_ complexed with cl

      11. Domain d4ffuk_: 4ffu K: [221180] automated match to d1q6wc_ complexed with cl

      12. Domain d4fful_: 4ffu L: [221181] automated match to d1q6wc_ complexed with cl

19. Staphylococcus aureus [TaxId:1280] [256169] (1 PDB entry)

    • Domain for 4a0y:

      • Domain d4a0yb_: 4a0y B: [250882] automated match to d2f3xa1 complexed with cl

20. Staphylococcus aureus [TaxId:158878] [260692] (1 PDB entry)

    • Domain for 4ncp:

      • Domain d4ncpc_: 4ncp C: [260693] automated match to d1y7ua1

21. Streptococcus mutans [TaxId:210007] [255926] (2 PDB entries)

    1. Domains for 3lbb:

       1. Domain d3lbba_: 3lbb A: [247436] automated match to d4i82a_ complexed with cl, so4

       2. Domain d3lbbb_: 3lbb B: [247437] automated match to d4i82a_ complexed with cl, so4

    2. Domains for 3lbe:

       1. Domain d3lbea_: 3lbe A: [247438] automated match to d4i82a_ complexed with cl, coa

       2. Domain d3lbeb_: 3lbe B: [247439] automated match to d4i82a_ complexed with cl, coa

       3. Domain d3lbec_: 3lbe C: [247440] automated match to d4i82a_ complexed with cl, coa

       4. Domain d3lbed_: 3lbe D: [247441] automated match to d4i82a_ complexed with cl, coa

22. Streptococcus pneumoniae [TaxId:170187] [226558] (1 PDB entry)

    • Domains for 4i82:

      1. Domain d4i82a_: 4i82 A: [223007] automated match to d1wlua_

      2. Domain d4i82b_: 4i82 B: [223008] automated match to d1wlua_

23. Sulfolobus solfataricus [TaxId:2287] [187114] (1 PDB entry)

    • Domains for 2gf6:

      1. Domain d2gf6b_: 2gf6 B: [135078] Other proteins in same PDB: d2gf6a1 automated match to d1s5ua_ complexed with ca, coa

      2. Domain d2gf6c_: 2gf6 C: [135079] Other proteins in same PDB: d2gf6a1 automated match to d1s5ua_ complexed with ca, coa

      3. Domain d2gf6d_: 2gf6 D: [135080] Other proteins in same PDB: d2gf6a1 automated match to d1s5ua_ complexed with ca, coa

24. Synechocystis sp. [TaxId:1111708] [226643] (1 PDB entry)

    • Domains for 4k00:

      1. Domain d4k00a_: 4k00 A: [224095] automated match to d1s5ue_ complexed with edo

      2. Domain d4k00b_: 4k00 B: [224096] automated match to d1s5ue_ complexed with edo

25. Yersinia pestis [TaxId:187410] [226504] (1 PDB entry)

    • Domains for 4gwh:

      1. Domain d4gwha1: 4gwh A:4-115 [222237] automated match to d1c8ua1

      2. Domain d4gwha2: 4gwh A:116-285 [222238] automated match to d1c8ua2

      3. Domain d4gwhb1: 4gwh B:2-115 [222239] automated match to d1c8ua1

      4. Domain d4gwhb2: 4gwh B:116-285 [222240] automated match to d1c8ua2

      5. Domain d4gwhc1: 4gwh C:2-115 [222241] automated match to d1c8ua1

      6. Domain d4gwhc2: 4gwh C:116-285 [222242] automated match to d1c8ua2

      7. Domain d4gwhd1: 4gwh D:2-115 [222243] automated match to d1c8ua1

      8. Domain d4gwhd2: 4gwh D:116-285 [222244] automated match to d1c8ua2

      9. Domain d4gwhe1: 4gwh E:2-115 [222245] automated match to d1c8ua1

      10. Domain d4gwhe2: 4gwh E:116-285 [222246] automated match to d1c8ua2

      11. Domain d4gwhf1: 4gwh F:2-115 [222247] automated match to d1c8ua1

      12. Domain d4gwhf2: 4gwh F:116-285 [222248] automated match to d1c8ua2

      13. Domain d4gwhg1: 4gwh G:2-115 [222249] automated match to d1c8ua1

      14. Domain d4gwhg2: 4gwh G:116-285 [222250] automated match to d1c8ua2

      15. Domain d4gwhh1: 4gwh H:2-115 [222251] automated match to d1c8ua1

      16. Domain d4gwhh2: 4gwh H:116-285 [222252] automated match to d1c8ua2

26. Yersinia pestis [TaxId:632] [257672] (1 PDB entry)

    • Domains for 4qfw:

      1. Domain d4qfwa1: 4qfw A:4-115 [257676] automated match to d1c8ua1

      2. Domain d4qfwa2: 4qfw A:116-285 [257677] automated match to d1c8ua2

      3. Domain d4qfwb1: 4qfw B:4-115 [257674] automated match to d1c8ua1

      4. Domain d4qfwb2: 4qfw B:116-285 [257678] automated match to d1c8ua2

      5. Domain d4qfwc1: 4qfw C:4-115 [257673] automated match to d1c8ua1

      6. Domain d4qfwc2: 4qfw C:116-285 [257675] automated match to d1c8ua2

More info for Protein automated matches from d.38.1.0: automated matches

Timeline for Protein automated matches from d.38.1.0: automated matches:

• Protein automated matches from d.38.1.0: automated matches first appeared in SCOPe 2.01
  
• Protein automated matches from d.38.1.0: automated matches appears in SCOPe 2.03
  
• Protein automated matches from d.38.1.0: automated matches appears in SCOPe 2.05
  
• Protein automated matches from d.38.1.0: automated matches appears in the current release, SCOPe 2.08