Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2575216Class f: Membrane and cell surface proteins and peptides [56835] (60 folds)
  3. 2576670Fold f.13: Class A G protein-coupled receptor (GPCR)-like [81322] (1 superfamily)
    core: up-and-down bundle of seven transmembrane helices tilted 20 degrees with respect to the plane of the membrane
  4. 2576671Superfamily f.13.1: Class A G protein-coupled receptor (GPCR)-like [81321] (5 families) (S)
    Pfam PF13853. Phylogeny described in PubMed 12761335
  5. 2576672Family f.13.1.1: Bacteriorhodopsin-like [81319] (6 proteins)
  6. 2576831Protein automated matches [190122] (7 species)
    not a true protein

Species:

  1. 2576832Halobacterium salinarium [TaxId:2242] [188662] (3 PDB entries)
    1. Domain for 2jaf:
    2. Domain for 2jag:
    3. Domain for 2zfe:
  2. 2576836Halobacterium salinarum [TaxId:2242] [186845] (18 PDB entries)
    1. Domain for 1x0i:
    2. Domain for 1x0k:
    3. Domain for 1x0s:
    4. Domain for 1xji:
    5. Domain for 2i1x:
    6. Domain for 2i20:
    7. Domain for 2i21:
    8. Domain for 2wjk:
    9. Domain for 2wjl:
    10. Domain for 2zzl:
    11. Domain for 3mbv:
    12. Domain for 3ns0:
    13. Domain for 3nsb:
    14. Domains for 4hwl:
      1. 2576838Domain d4hwla_: 4hwl A: [192665]
        automated match to d1r84a_
        complexed with gol, hex, hp6, ret
      2. 2576839Domain d4hwlb_: 4hwl B: [192667]
        automated match to d1r84a_
        complexed with gol, hex, hp6, ret
    15. Domains for 4hyx:
      1. 2576841Domain d4hyxa_: 4hyx A: [192664]
        automated match to d1r84a_
        complexed with c14, d10, gol, hex, oct, ret
      2. 2576842Domain d4hyxb_: 4hyx B: [192666]
        automated match to d1r84a_
        complexed with c14, d10, gol, hex, oct, ret
    16. Domain for 5ahy:
    17. Domain for 5ahz:
    18. Domain for 5g36:
  3. 2576857Halobacterium salinarum [TaxId:478009] [311987] (1 PDB entry)
  4. 2576859Halobacterium salinarum [TaxId:64091] [270103] (2 PDB entries)
    1. Domain for 4x31:
    2. Domain for 5zil:
  5. 2576861Halobacterium sp. [TaxId:29285] [188058] (3 PDB entries)
    1. Domains for 1vgo:
      1. 2576867Domain d1vgoa_: 1vgo A: [161863]
        automated match to d1uaza_
        complexed with bng, ret, so4
      2. 2576868Domain d1vgob_: 1vgo B: [161864]
        automated match to d1uaza_
        complexed with bng, ret, so4
    2. Domain for 2ei4:
    3. Domains for 2z55:
      1. 2576863Domain d2z55a_: 2z55 A: [171054]
        automated match to d1uaza_
        complexed with 22b, l2p, ret
      2. 2576864Domain d2z55b_: 2z55 B: [171055]
        automated match to d1uaza_
        complexed with 22b, l2p, ret
      3. 2576865Domain d2z55d_: 2z55 D: [171056]
        automated match to d1uaza_
        complexed with 22b, l2p, ret
      4. 2576866Domain d2z55e_: 2z55 E: [171057]
        automated match to d1uaza_
        complexed with 22b, l2p, ret
  6. 2576869Halobacterium sp. [TaxId:64091] [193950] (1 PDB entry)
  7. 2576871Nostoc sp. [TaxId:103690] [258526] (1 PDB entry)

More info for Protein automated matches from f.13.1.1: Bacteriorhodopsin-like

Timeline for Protein automated matches from f.13.1.1: Bacteriorhodopsin-like: