SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2137471Fold c.72: Ribokinase-like [53612] (3 superfamilies)
    core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest
    potential superfamily: members of this fold have similar functions but different ATP-binding sites
  4. 2137472Superfamily c.72.1: Ribokinase-like [53613] (6 families) (S)
    has extra strand located between strands 2 and 3
  5. 2137707Family c.72.1.0: automated matches [191321] (1 protein)
    not a true family
  6. 2137708Protein automated matches [190117] (40 species)
    not a true protein

Species:

  1. 2137709African malaria mosquito (Anopheles gambiae) [TaxId:7165] [196378] (1 PDB entry)
  2. 2137713Agrobacterium tumefaciens [TaxId:176299] [225189] (2 PDB entries)
    1. Domain for 2nwh:
    2. Domain for 2rbc:
  3. 2137716Bacillus halodurans [TaxId:272558] [194493] (1 PDB entry)
  4. 2137718Bacteroides thetaiotaomicron [TaxId:226186] [225292] (1 PDB entry)
  5. 2137720Blood fluke (Schistosoma mansoni) [TaxId:6183] [226519] (5 PDB entries)
    1. Domains for 3uq6:
      1. 2137725Domain d3uq6a_: 3uq6 A: [217482]
        automated match to d2absa1
        complexed with adn, amp, cl
      2. 2137726Domain d3uq6b_: 3uq6 B: [217483]
        automated match to d2absa1
        complexed with adn, amp, cl
    2. Domains for 3uq9:
      1. 2137723Domain d3uq9a_: 3uq9 A: [217485]
        automated match to d2absa1
        complexed with cl, tbn
      2. 2137724Domain d3uq9b_: 3uq9 B: [217486]
        automated match to d2absa1
        complexed with cl, tbn
    3. Domains for 3vaq:
      1. 2137729Domain d3vaqa_: 3vaq A: [217730]
        automated match to d2absa1
        complexed with adn, cl
      2. 2137730Domain d3vaqb_: 3vaq B: [217731]
        automated match to d2absa1
        complexed with adn, cl
    4. Domains for 3vas:
      1. 2137721Domain d3vasa_: 3vas A: [217732]
        automated match to d2i6aa_
        complexed with adn, cl
      2. 2137722Domain d3vasb_: 3vas B: [217733]
        automated match to d2i6aa_
        complexed with adn, cl
    5. Domains for 4dc3:
      1. 2137727Domain d4dc3a_: 4dc3 A: [219670]
        automated match to d2absa1
        complexed with 2fa, adn, cl
      2. 2137728Domain d4dc3b_: 4dc3 B: [219671]
        automated match to d2absa1
        complexed with 2fa, adn, cl
  6. 2137731Burkholderia thailandensis [TaxId:271848] [196112] (5 PDB entries)
    1. Domains for 3b1n:
      1. 2137732Domain d3b1na_: 3b1n A: [231815]
        Other proteins in same PDB: d3b1nb2
        automated match to d3b1rb_
        complexed with adp, gol, mzr, na
      2. 2137733Domain d3b1nb1: 3b1n B:2-312 [231816]
        Other proteins in same PDB: d3b1nb2
        automated match to d3b1rb_
        complexed with adp, gol, mzr, na
    2. Domains for 3b1o:
      1. 2137747Domain d3b1oa1: 3b1o A:2-312 [231817]
        Other proteins in same PDB: d3b1oa2
        automated match to d3b1rb_
      2. 2137748Domain d3b1ob_: 3b1o B: [231818]
        Other proteins in same PDB: d3b1oa2
        automated match to d3b1rb_
    3. Domain for 3b1p:
    4. Domains for 3b1q:
      1. 2137734Domain d3b1qa_: 3b1q A: [231820]
        Other proteins in same PDB: d3b1qb2, d3b1qc2, d3b1qd2, d3b1qe2
        automated match to d3b1rb_
        complexed with act, na, nos, p33
      2. 2137735Domain d3b1qb1: 3b1q B:2-312 [231821]
        Other proteins in same PDB: d3b1qb2, d3b1qc2, d3b1qd2, d3b1qe2
        automated match to d3b1rb_
        complexed with act, na, nos, p33
      3. 2137736Domain d3b1qc1: 3b1q C:2-312 [231822]
        Other proteins in same PDB: d3b1qb2, d3b1qc2, d3b1qd2, d3b1qe2
        automated match to d3b1rb_
        complexed with act, na, nos, p33
      4. 2137737Domain d3b1qd1: 3b1q D:2-312 [231823]
        Other proteins in same PDB: d3b1qb2, d3b1qc2, d3b1qd2, d3b1qe2
        automated match to d3b1rb_
        complexed with act, na, nos, p33
      5. 2137738Domain d3b1qe1: 3b1q E:2-312 [231824]
        Other proteins in same PDB: d3b1qb2, d3b1qc2, d3b1qd2, d3b1qe2
        automated match to d3b1rb_
        complexed with act, na, nos, p33
      6. 2137739Domain d3b1qf_: 3b1q F: [231825]
        Other proteins in same PDB: d3b1qb2, d3b1qc2, d3b1qd2, d3b1qe2
        automated match to d3b1rb_
        complexed with act, na, nos, p33
    5. Domains for 3b1r:
      1. 2137741Domain d3b1ra_: 3b1r A: [199005]
        automated match to d3b1rc_
        complexed with amp, mg
      2. 2137742Domain d3b1rb_: 3b1r B: [196114]
        automated match to d2c49b_
        complexed with amp, mg
      3. 2137743Domain d3b1rc_: 3b1r C: [196113]
        automated match to d2c49b_
        complexed with amp, mg
      4. 2137744Domain d3b1rd_: 3b1r D: [199006]
        automated match to d3b1rc_
        complexed with amp, mg
      5. 2137745Domain d3b1re_: 3b1r E: [199007]
        automated match to d3b1rc_
        complexed with amp, mg
      6. 2137746Domain d3b1rf_: 3b1r F: [199008]
        automated match to d3b1rc_
        complexed with amp, mg
  7. 2137749Chlorobaculum tepidum [TaxId:1097] [232683] (1 PDB entry)
  8. 2137752Clostridium perfringens [TaxId:1502] [255915] (1 PDB entry)
  9. 2137755Corynebacterium glutamicum [TaxId:1718] [189540] (1 PDB entry)
  10. 2137760Entamoeba (Entamoeba histolytica) [TaxId:5759] [268849] (3 PDB entries)
    1. Domains for 4s1h:
      1. 2137761Domain d4s1ha1: 4s1h A:1-279 [268850]
        Other proteins in same PDB: d4s1ha2
        automated match to d1td2a_
        complexed with adp, mg
      2. 2137762Domain d4s1hb_: 4s1h B: [268855]
        Other proteins in same PDB: d4s1ha2
        automated match to d1td2a_
        complexed with adp, mg
    2. Domains for 4s1i:
      1. 2137765Domain d4s1ia1: 4s1i A:1-279 [309647]
        Other proteins in same PDB: d4s1ia2, d4s1ib2
        automated match to d4s1ha_
        complexed with mg, plp
      2. 2137766Domain d4s1ib1: 4s1i B:1-279 [309649]
        Other proteins in same PDB: d4s1ia2, d4s1ib2
        automated match to d4s1ha_
        complexed with mg, plp
    3. Domains for 4s1m:
      1. 2137763Domain d4s1ma_: 4s1m A: [268858]
        automated match to d1td2a_
        complexed with mg
      2. 2137764Domain d4s1mb_: 4s1m B: [268851]
        automated match to d1td2a_
        complexed with mg
  11. 2137767Enterococcus faecalis [TaxId:1351] [186955] (2 PDB entries)
    1. Domain for 2awd:
    2. Domain for 3ktn:
  12. 2137770Enterococcus faecalis [TaxId:226185] [187075] (3 PDB entries)
    1. Domains for 2f02:
      1. 2137774Domain d2f02a2: 2f02 A:2-315 [132649]
        Other proteins in same PDB: d2f02a3, d2f02a4, d2f02b3
        automated match to d1o14a_
        complexed with atp
      2. 2137775Domain d2f02b2: 2f02 B:2-313 [132650]
        Other proteins in same PDB: d2f02a3, d2f02a4, d2f02b3
        automated match to d1o14a_
        complexed with atp
    2. Domains for 2r3b:
      1. 2137771Domain d2r3ba1: 2r3b A:1-276 [243652]
        Other proteins in same PDB: d2r3ba2, d2r3bb2
        automated match to d1kyha_
        complexed with cl, edo, mg
      2. 2137772Domain d2r3bb1: 2r3b B:1-276 [243653]
        Other proteins in same PDB: d2r3ba2, d2r3bb2
        automated match to d1kyha_
        complexed with cl, edo, mg
    3. Domain for 2r3e:
  13. 2137776Escherichia coli K-12 [TaxId:83333] [189558] (5 PDB entries)
    1. Domains for 3h49:
      1. 2137777Domain d3h49a_: 3h49 A: [210864]
        automated match to d3in1b_
      2. 2137778Domain d3h49b_: 3h49 B: [210865]
        automated match to d3in1b_
    2. Domains for 3in1:
      1. 2137786Domain d3in1a_: 3in1 A: [199553]
        automated match to d3in1b_
        complexed with adp, na
      2. 2137787Domain d3in1b_: 3in1 B: [196543]
        automated match to d3pl2d_
        complexed with adp, na
    3. Domains for 3n1c:
      1. 2137779Domain d3n1ca_: 3n1c A: [181774]
        automated match to d2abqa1
        complexed with f6p
      2. 2137780Domain d3n1cb_: 3n1c B: [181775]
        automated match to d2abqa1
        complexed with f6p
      3. 2137781Domain d3n1cc_: 3n1c C: [181776]
        automated match to d2abqa1
        complexed with f6p
      4. 2137782Domain d3n1cd_: 3n1c D: [181777]
        automated match to d2abqa1
        complexed with f6p
    4. Domain for 3uqd:
    5. Domains for 3uqe:
      1. 2137784Domain d3uqea_: 3uqe A: [194282]
        automated match to d3n1ca_
        complexed with atp, mg, pop; mutant
      2. 2137785Domain d3uqeb_: 3uqe B: [194284]
        automated match to d3n1ca_
        complexed with atp, mg, pop; mutant
  14. 2137788Escherichia coli [TaxId:217992] [189024] (2 PDB entries)
    1. Domains for 3iq0:
      1. 2137789Domain d3iq0a_: 3iq0 A: [178517]
        Other proteins in same PDB: d3iq0b2
        automated match to d1wyea1
        complexed with atp, mg
      2. 2137790Domain d3iq0b1: 3iq0 B:-1-311 [178518]
        Other proteins in same PDB: d3iq0b2
        automated match to d1wyea1
        complexed with atp, mg
    2. Domains for 3k9e:
      1. 2137791Domain d3k9ea_: 3k9e A: [179209]
        Other proteins in same PDB: d3k9eb2
        automated match to d1wyea1
      2. 2137792Domain d3k9eb1: 3k9e B:-1-311 [179210]
        Other proteins in same PDB: d3k9eb2
        automated match to d1wyea1
  15. 2137793Escherichia coli [TaxId:562] [188596] (4 PDB entries)
    1. Domains for 3cqd:
      1. 2137798Domain d3cqda_: 3cqd A: [173409]
        automated match to d2abqa1
        complexed with atp, mg
      2. 2137799Domain d3cqdb_: 3cqd B: [173410]
        automated match to d2abqa1
        complexed with atp, mg
    2. Domains for 3umo:
      1. 2137794Domain d3umoa_: 3umo A: [217447]
        automated match to d3cqda_
        complexed with atp, k, mg
      2. 2137795Domain d3umob_: 3umo B: [217448]
        automated match to d3cqda_
        complexed with atp, k, mg
    3. Domains for 3ump:
      1. 2137796Domain d3umpa_: 3ump A: [217449]
        automated match to d3cqda_
        complexed with atp, cs, mg
      2. 2137797Domain d3umpb_: 3ump B: [217450]
        automated match to d3cqda_
        complexed with atp, cs, mg
    4. Domains for 3uqd:
      1. 2137800Domain d3uqdb_: 3uqd B: [201102]
        automated match to d3cqda_
        complexed with adp, atp, f6p, fbp, mg
      2. 2137801Domain d3uqdc_: 3uqd C: [201103]
        automated match to d3cqda_
        complexed with adp, atp, f6p, fbp, mg
      3. 2137802Domain d3uqdd_: 3uqd D: [201104]
        automated match to d3cqda_
        complexed with adp, atp, f6p, fbp, mg
  16. 2137803Klebsiella pneumoniae [TaxId:272620] [225726] (2 PDB entries)
    1. Domains for 3i3y:
      1. 2137808Domain d3i3ya1: 3i3y A:2-285 [211455]
        Other proteins in same PDB: d3i3ya2, d3i3yb2, d3i3yc2, d3i3yd2
        automated match to d2fv7a1
        complexed with gol, rib, so4
      2. 2137809Domain d3i3yb1: 3i3y B:2-285 [211456]
        Other proteins in same PDB: d3i3ya2, d3i3yb2, d3i3yc2, d3i3yd2
        automated match to d2fv7a1
        complexed with gol, rib, so4
      3. 2137810Domain d3i3yc1: 3i3y C:2-285 [211457]
        Other proteins in same PDB: d3i3ya2, d3i3yb2, d3i3yc2, d3i3yd2
        automated match to d2fv7a1
        complexed with gol, rib, so4
      4. 2137811Domain d3i3yd1: 3i3y D:2-285 [211458]
        Other proteins in same PDB: d3i3ya2, d3i3yb2, d3i3yc2, d3i3yd2
        automated match to d2fv7a1
        complexed with gol, rib, so4
    2. Domains for 3ikh:
      1. 2137804Domain d3ikha1: 3ikh A:2-285 [211781]
        Other proteins in same PDB: d3ikha2, d3ikhb2, d3ikhc2, d3ikhd2
        automated match to d2fv7a1
        complexed with atp, gol
      2. 2137805Domain d3ikhb1: 3ikh B:2-285 [211782]
        Other proteins in same PDB: d3ikha2, d3ikhb2, d3ikhc2, d3ikhd2
        automated match to d2fv7a1
        complexed with atp, gol
      3. 2137806Domain d3ikhc1: 3ikh C:2-285 [211783]
        Other proteins in same PDB: d3ikha2, d3ikhb2, d3ikhc2, d3ikhd2
        automated match to d2fv7a1
        complexed with atp, gol
      4. 2137807Domain d3ikhd1: 3ikh D:2-285 [211784]
        Other proteins in same PDB: d3ikha2, d3ikhb2, d3ikhc2, d3ikhd2
        automated match to d2fv7a1
        complexed with atp, gol
  17. 2137812Listeria innocua [TaxId:1642] [196383] (4 PDB entries)
    1. Domain for 3hic:
    2. Domain for 3ie7:
    3. Domain for 3jul:
    4. Domain for 3q1y:
  18. 2137817Methanococcus jannaschii [TaxId:2190] [187510] (2 PDB entries)
    1. Domains for 2c49:
      1. 2137819Domain d2c49a_: 2c49 A: [163256]
        automated match to d1vm7b_
        complexed with adn, anp, mg
      2. 2137820Domain d2c49b_: 2c49 B: [163257]
        automated match to d1vm7b_
        complexed with adn, anp, mg
    2. Domain for 2c4e:
  19. 2137821Mycobacterium bovis [TaxId:233413] [260078] (1 PDB entry)
  20. 2137823Mycobacterium tuberculosis [TaxId:1773] [193352] (6 PDB entries)
    1. Domains for 2pkf:
      1. 2137824Domain d2pkfa1: 2pkf A:1-324 [205537]
        Other proteins in same PDB: d2pkfa2, d2pkfb2
        automated match to d2pkma_
      2. 2137825Domain d2pkfb1: 2pkf B:0-324 [205538]
        Other proteins in same PDB: d2pkfa2, d2pkfb2
        automated match to d2pkma_
    2. Domain for 2pkk:
    3. Domain for 2pkm:
    4. Domain for 2pkn:
    5. Domain for 4o1g:
    6. Domain for 4pvv:
  21. 2137831Polaromonas sp. [TaxId:296591] [226331] (1 PDB entry)
  22. 2137836Pyrococcus horikoshii OT3 [TaxId:70601] [225622] (1 PDB entry)
  23. 2137841Pyrococcus horikoshii [TaxId:53953] [225557] (2 PDB entries)
    1. Domains for 3ewm:
      1. 2137842Domain d3ewma1: 3ewm A:4-305 [209687]
        Other proteins in same PDB: d3ewma2, d3ewmb2, d3ewmb3
        automated match to d2fv7a1
      2. 2137843Domain d3ewmb1: 3ewm B:4-305 [209688]
        Other proteins in same PDB: d3ewma2, d3ewmb2, d3ewmb3
        automated match to d2fv7a1
    2. Domains for 3ih0:
      1. 2137844Domain d3ih0a1: 3ih0 A:4-305 [211683]
        Other proteins in same PDB: d3ih0a2, d3ih0b2
        automated match to d2fv7a1
        complexed with anp, gol
      2. 2137845Domain d3ih0b1: 3ih0 B:4-305 [211684]
        Other proteins in same PDB: d3ih0a2, d3ih0b2
        automated match to d2fv7a1
        complexed with anp, gol
  24. 2137846Rhizobium etli [TaxId:347834] [226336] (19 PDB entries)
    1. Domains for 4e3a:
      1. 2137869Domain d4e3aa_: 4e3a A: [220230]
        automated match to d1lioa_
        complexed with adn
      2. 2137870Domain d4e3ab_: 4e3a B: [220231]
        automated match to d1lioa_
        complexed with adn
    2. Domains for 4jks:
      1. 2137849Domain d4jksa_: 4jks A: [223878]
        automated match to d1lioa_
        complexed with adn, dms
      2. 2137850Domain d4jksb_: 4jks B: [223879]
        automated match to d1lioa_
        complexed with adn, dms
    3. Domains for 4jku:
      1. 2137853Domain d4jkua_: 4jku A: [223880]
        automated match to d1lioa_
        complexed with adn, dms, qnc
      2. 2137854Domain d4jkub_: 4jku B: [223881]
        automated match to d1lioa_
        complexed with adn, dms, qnc
    4. Domains for 4k8c:
      1. 2137867Domain d4k8ca_: 4k8c A: [224203]
        automated match to d1lioa_
        complexed with adn, adp, dms, k
      2. 2137868Domain d4k8cb_: 4k8c B: [224204]
        automated match to d1lioa_
        complexed with adn, adp, dms, k
    5. Domains for 4k8k:
      1. 2137859Domain d4k8ka1: 4k8k A:-1-328 [224205]
        Other proteins in same PDB: d4k8ka2
        automated match to d1lioa_
        complexed with 1pj, 1pk, adn, k
      2. 2137860Domain d4k8kb_: 4k8k B: [224206]
        Other proteins in same PDB: d4k8ka2
        automated match to d1lioa_
        complexed with 1pj, 1pk, adn, k
    6. Domains for 4k8p:
      1. 2137861Domain d4k8pa1: 4k8p A:-1-328 [224207]
        Other proteins in same PDB: d4k8pa2, d4k8pb2
        automated match to d1lioa_
        complexed with 12m, adn, dms, k
      2. 2137862Domain d4k8pb1: 4k8p B:-1-328 [224208]
        Other proteins in same PDB: d4k8pa2, d4k8pb2
        automated match to d1lioa_
        complexed with 12m, adn, dms, k
    7. Domains for 4k8t:
      1. 2137883Domain d4k8ta_: 4k8t A: [224212]
        automated match to d1lioa_
        complexed with adn, dms, e34, k
      2. 2137884Domain d4k8tb_: 4k8t B: [224213]
        automated match to d1lioa_
        complexed with adn, dms, e34, k
    8. Domains for 4k93:
      1. 2137863Domain d4k93a_: 4k93 A: [224216]
        automated match to d1lioa_
        complexed with 1q8, adn, dms, k
      2. 2137864Domain d4k93b_: 4k93 B: [224217]
        automated match to d1lioa_
        complexed with 1q8, adn, dms, k
    9. Domains for 4k9c:
      1. 2137857Domain d4k9ca_: 4k9c A: [224218]
        automated match to d1lioa_
        complexed with 1q8, adn, c29, dms, k
      2. 2137858Domain d4k9cb_: 4k9c B: [224219]
        automated match to d1lioa_
        complexed with 1q8, adn, c29, dms, k
    10. Domains for 4k9i:
      1. 2137879Domain d4k9ia_: 4k9i A: [224223]
        automated match to d1lioa_
        complexed with adn, dms, k, nrh
      2. 2137880Domain d4k9ib_: 4k9i B: [224224]
        automated match to d1lioa_
        complexed with adn, dms, k, nrh
    11. Domains for 4kad:
      1. 2137871Domain d4kada_: 4kad A: [224235]
        automated match to d1lioa_
        complexed with 1qb, adn, dms, k
      2. 2137872Domain d4kadb_: 4kad B: [224236]
        automated match to d1lioa_
        complexed with 1qb, adn, dms, k
    12. Domains for 4kah:
      1. 2137877Domain d4kaha_: 4kah A: [224241]
        automated match to d1lioa_
        complexed with adn, br, byz, dms, k
      2. 2137878Domain d4kahb_: 4kah B: [224242]
        automated match to d1lioa_
        complexed with adn, br, byz, dms, k
    13. Domains for 4kal:
      1. 2137847Domain d4kala_: 4kal A: [224243]
        automated match to d1lioa_
        complexed with adn, dms, k, q3c
      2. 2137848Domain d4kalb_: 4kal B: [224244]
        automated match to d1lioa_
        complexed with adn, dms, k, q3c
    14. Domains for 4kan:
      1. 2137855Domain d4kana_: 4kan A: [224245]
        automated match to d1lioa_
        complexed with adn, dzy, k
      2. 2137856Domain d4kanb_: 4kan B: [224246]
        automated match to d1lioa_
        complexed with adn, dzy, k
    15. Domains for 4kbe:
      1. 2137881Domain d4kbea_: 4kbe A: [224250]
        automated match to d1lioa_
        complexed with adn, bze, dms, k
      2. 2137882Domain d4kbeb_: 4kbe B: [224251]
        automated match to d1lioa_
        complexed with adn, bze, dms, k
    16. Domains for 4lbg:
      1. 2137851Domain d4lbga1: 4lbg A:-1-328 [224634]
        Other proteins in same PDB: d4lbga2
        automated match to d1lioa_
        complexed with adn, dms, k
      2. 2137852Domain d4lbgb_: 4lbg B: [224635]
        Other proteins in same PDB: d4lbga2
        automated match to d1lioa_
        complexed with adn, dms, k
    17. Domains for 4lbx:
      1. 2137873Domain d4lbxa1: 4lbx A:-1-328 [224642]
        Other proteins in same PDB: d4lbxa2
        automated match to d1lioa_
        complexed with adn, ctn, dms, k
      2. 2137874Domain d4lbxb_: 4lbx B: [224643]
        Other proteins in same PDB: d4lbxa2
        automated match to d1lioa_
        complexed with adn, ctn, dms, k
    18. Domains for 4lc4:
      1. 2137875Domain d4lc4a_: 4lc4 A: [224646]
        automated match to d1lioa_
        complexed with adn, dms, gmp, k
      2. 2137876Domain d4lc4b_: 4lc4 B: [224647]
        automated match to d1lioa_
        complexed with adn, dms, gmp, k
    19. Domains for 4lca:
      1. 2137865Domain d4lcaa_: 4lca A: [224652]
        automated match to d1lioa_
        complexed with adn, dms, k, thm
      2. 2137866Domain d4lcab_: 4lca B: [224653]
        automated match to d1lioa_
        complexed with adn, dms, k, thm
  25. 2137885Rhizobium meliloti (Sinorhizobium meliloti) [TaxId:382] [226248] (1 PDB entry)
  26. 2137888Staphylococcus aureus [TaxId:1280] [187913] (4 PDB entries)
    1. Domains for 2jg5:
      1. 2137893Domain d2jg5a_: 2jg5 A: [166171]
        automated match to d2abqa1
      2. 2137894Domain d2jg5b_: 2jg5 B: [166172]
        automated match to d2abqa1
    2. Domains for 2q5r:
      1. 2137895Domain d2q5ra1: 2q5r A:1-310 [205749]
        Other proteins in same PDB: d2q5ra2, d2q5rb2, d2q5rc2, d2q5rd2
        automated match to d2awdb_
      2. 2137896Domain d2q5rb1: 2q5r B:1-310 [205750]
        Other proteins in same PDB: d2q5ra2, d2q5rb2, d2q5rc2, d2q5rd2
        automated match to d2awdb_
      3. 2137897Domain d2q5rc1: 2q5r C:1-310 [205751]
        Other proteins in same PDB: d2q5ra2, d2q5rb2, d2q5rc2, d2q5rd2
        automated match to d2awdb_
      4. 2137898Domain d2q5rd1: 2q5r D:1-310 [205752]
        Other proteins in same PDB: d2q5ra2, d2q5rb2, d2q5rc2, d2q5rd2
        automated match to d2awdb_
    3. Domains for 4c5n:
      1. 2137889Domain d4c5na_: 4c5n A: [237775]
        automated match to d1jxha_
        complexed with acp, pxl, so4, ueg
      2. 2137890Domain d4c5nb_: 4c5n B: [237776]
        automated match to d1jxha_
        complexed with acp, pxl, so4, ueg
      3. 2137891Domain d4c5nc_: 4c5n C: [237778]
        automated match to d1jxha_
        complexed with acp, pxl, so4, ueg
      4. 2137892Domain d4c5nd_: 4c5n D: [237777]
        automated match to d1jxha_
        complexed with acp, pxl, so4, ueg
    4. Domains for 5coj:
      1. 2269503Domain d5cojb_: 5coj B: [312809]
        Other proteins in same PDB: d5coja2, d5coje2
        automated match to d3hpda_
        complexed with mg, tze
      2. 2269509Domain d5cojf_: 5coj F: [312815]
        Other proteins in same PDB: d5coja2, d5coje2
        automated match to d3hpda_
        complexed with mg, tze
      3. 2269554Domain d5cojc_: 5coj C: [312858]
        Other proteins in same PDB: d5coja2, d5coje2
        automated match to d3hpda_
        complexed with mg, tze
      4. 2269590Domain d5coje1: 5coj E:2-263 [312894]
        Other proteins in same PDB: d5coja2, d5coje2
        automated match to d3hpda_
        complexed with mg, tze
      5. 2269594Domain d5coja1: 5coj A:1-263 [312898]
        Other proteins in same PDB: d5coja2, d5coje2
        automated match to d3hpda_
        complexed with mg, tze
      6. 2269628Domain d5cojh_: 5coj H: [312933]
        Other proteins in same PDB: d5coja2, d5coje2
        automated match to d3hpda_
        complexed with mg, tze
  27. 2137899Staphylococcus aureus [TaxId:158878] [237768] (4 PDB entries)
    1. Domains for 4c5j:
      1. 2137908Domain d4c5ja1: 4c5j A:2-276 [237771]
        Other proteins in same PDB: d4c5ja2, d4c5jb2, d4c5jc2, d4c5jd2
        automated match to d1jxha_
        complexed with so4
      2. 2137909Domain d4c5jb1: 4c5j B:2-276 [237773]
        Other proteins in same PDB: d4c5ja2, d4c5jb2, d4c5jc2, d4c5jd2
        automated match to d1jxha_
        complexed with so4
      3. 2137910Domain d4c5jc1: 4c5j C:2-276 [237772]
        Other proteins in same PDB: d4c5ja2, d4c5jb2, d4c5jc2, d4c5jd2
        automated match to d1jxha_
        complexed with so4
      4. 2137911Domain d4c5jd1: 4c5j D:2-276 [237774]
        Other proteins in same PDB: d4c5ja2, d4c5jb2, d4c5jc2, d4c5jd2
        automated match to d1jxha_
        complexed with so4
    2. Domains for 4c5k:
      1. 2137900Domain d4c5ka1: 4c5k A:2-276 [265979]
        Other proteins in same PDB: d4c5ka2, d4c5kb2, d4c5kc2, d4c5kd2
        automated match to d4c5na_
        complexed with adp, so4
      2. 2137901Domain d4c5kb1: 4c5k B:2-276 [265980]
        Other proteins in same PDB: d4c5ka2, d4c5kb2, d4c5kc2, d4c5kd2
        automated match to d4c5na_
        complexed with adp, so4
      3. 2137902Domain d4c5kc1: 4c5k C:2-276 [265981]
        Other proteins in same PDB: d4c5ka2, d4c5kb2, d4c5kc2, d4c5kd2
        automated match to d4c5na_
        complexed with adp, so4
      4. 2137903Domain d4c5kd1: 4c5k D:2-276 [265982]
        Other proteins in same PDB: d4c5ka2, d4c5kb2, d4c5kc2, d4c5kd2
        automated match to d4c5na_
        complexed with adp, so4
    3. Domains for 4c5l:
      1. 2137912Domain d4c5la1: 4c5l A:2-276 [265983]
        Other proteins in same PDB: d4c5la2, d4c5lb2, d4c5lc2, d4c5ld2
        automated match to d4c5na_
        complexed with pxl, so4, ueg
      2. 2137913Domain d4c5lb1: 4c5l B:2-276 [265984]
        Other proteins in same PDB: d4c5la2, d4c5lb2, d4c5lc2, d4c5ld2
        automated match to d4c5na_
        complexed with pxl, so4, ueg
      3. 2137914Domain d4c5lc1: 4c5l C:2-276 [265985]
        Other proteins in same PDB: d4c5la2, d4c5lb2, d4c5lc2, d4c5ld2
        automated match to d4c5na_
        complexed with pxl, so4, ueg
      4. 2137915Domain d4c5ld1: 4c5l D:2-276 [265986]
        Other proteins in same PDB: d4c5la2, d4c5lb2, d4c5lc2, d4c5ld2
        automated match to d4c5na_
        complexed with pxl, so4, ueg
    4. Domains for 4c5m:
      1. 2137904Domain d4c5ma1: 4c5m A:2-276 [265987]
        Other proteins in same PDB: d4c5ma2, d4c5mb2, d4c5mc2, d4c5md2
        automated match to d4c5na_
        complexed with acp, so4
      2. 2137905Domain d4c5mb1: 4c5m B:2-276 [265988]
        Other proteins in same PDB: d4c5ma2, d4c5mb2, d4c5mc2, d4c5md2
        automated match to d4c5na_
        complexed with acp, so4
      3. 2137906Domain d4c5mc1: 4c5m C:2-276 [265989]
        Other proteins in same PDB: d4c5ma2, d4c5mb2, d4c5mc2, d4c5md2
        automated match to d4c5na_
        complexed with acp, so4
      4. 2137907Domain d4c5md1: 4c5m D:2-276 [265990]
        Other proteins in same PDB: d4c5ma2, d4c5mb2, d4c5mc2, d4c5md2
        automated match to d4c5na_
        complexed with acp, so4
  28. 2137916Staphylococcus aureus [TaxId:93061] [225257] (2 PDB entries)
    1. Domains for 2jg1:
      1. 2137917Domain d2jg1a1: 2jg1 A:1-310 [205022]
        Other proteins in same PDB: d2jg1a2, d2jg1b2, d2jg1c2, d2jg1d2
        automated match to d2awdb_
        complexed with anp, mg, ta6
      2. 2137918Domain d2jg1b1: 2jg1 B:1-310 [205023]
        Other proteins in same PDB: d2jg1a2, d2jg1b2, d2jg1c2, d2jg1d2
        automated match to d2awdb_
        complexed with anp, mg, ta6
      3. 2137919Domain d2jg1c1: 2jg1 C:1-310 [205024]
        Other proteins in same PDB: d2jg1a2, d2jg1b2, d2jg1c2, d2jg1d2
        automated match to d2awdb_
        complexed with anp, mg, ta6
      4. 2137920Domain d2jg1d1: 2jg1 D:1-310 [205025]
        Other proteins in same PDB: d2jg1a2, d2jg1b2, d2jg1c2, d2jg1d2
        automated match to d2awdb_
        complexed with anp, mg, ta6
    2. Domains for 2jgv:
      1. 2137921Domain d2jgva1: 2jgv A:1-310 [205041]
        Other proteins in same PDB: d2jgva2, d2jgvb2, d2jgvc2, d2jgvd2
        automated match to d2awdb_
        complexed with adp
      2. 2137922Domain d2jgvb1: 2jgv B:1-310 [205042]
        Other proteins in same PDB: d2jgva2, d2jgvb2, d2jgvc2, d2jgvd2
        automated match to d2awdb_
        complexed with adp
      3. 2137923Domain d2jgvc1: 2jgv C:1-310 [205043]
        Other proteins in same PDB: d2jgva2, d2jgvb2, d2jgvc2, d2jgvd2
        automated match to d2awdb_
        complexed with adp
      4. 2137924Domain d2jgvd1: 2jgv D:1-310 [205044]
        Other proteins in same PDB: d2jgva2, d2jgvb2, d2jgvc2, d2jgvd2
        automated match to d2awdb_
        complexed with adp
  29. 2137925Staphylococcus aureus [TaxId:93062] [195529] (1 PDB entry)
  30. 2137927Sulfolobus tokodaii [TaxId:273063] [186841] (2 PDB entries)
    1. Domains for 1wye:
      1. 2137939Domain d1wyea_: 1wye A: [121438]
        automated match to d1v19a_
      2. 2137940Domain d1wyeb_: 1wye B: [121439]
        automated match to d1v19a_
      3. 2137941Domain d1wyec_: 1wye C: [121440]
        automated match to d1v19a_
      4. 2137942Domain d1wyed_: 1wye D: [121441]
        automated match to d1v19a_
      5. 2137943Domain d1wyee_: 1wye E: [121442]
        automated match to d1v19a_
      6. 2137944Domain d1wyef_: 1wye F: [121443]
        automated match to d1v19a_
    2. Domains for 2dcn:
      1. 2137928Domain d2dcnb_: 2dcn B: [131375]
        Other proteins in same PDB: d2dcna1
        automated match to d1v19a_
        complexed with adp, ckp, k, mg
      2. 2137929Domain d2dcnc_: 2dcn C: [131376]
        Other proteins in same PDB: d2dcna1
        automated match to d1v19a_
        complexed with adp, ckp, k, mg
      3. 2137930Domain d2dcnd_: 2dcn D: [131377]
        Other proteins in same PDB: d2dcna1
        automated match to d1v19a_
        complexed with adp, ckp, k, mg
      4. 2137931Domain d2dcne_: 2dcn E: [131378]
        Other proteins in same PDB: d2dcna1
        automated match to d1v19a_
        complexed with adp, ckp, k, mg
      5. 2137932Domain d2dcnf_: 2dcn F: [131379]
        Other proteins in same PDB: d2dcna1
        automated match to d1v19a_
        complexed with adp, ckp, k, mg
      6. 2137933Domain d2dcng_: 2dcn G: [131380]
        Other proteins in same PDB: d2dcna1
        automated match to d1v19a_
        complexed with adp, ckp, k, mg
      7. 2137934Domain d2dcnh_: 2dcn H: [131381]
        Other proteins in same PDB: d2dcna1
        automated match to d1v19a_
        complexed with adp, ckp, k, mg
      8. 2137935Domain d2dcni_: 2dcn I: [131382]
        Other proteins in same PDB: d2dcna1
        automated match to d1v19a_
        complexed with adp, ckp, k, mg
      9. 2137936Domain d2dcnj_: 2dcn J: [131383]
        Other proteins in same PDB: d2dcna1
        automated match to d1v19a_
        complexed with adp, ckp, k, mg
      10. 2137937Domain d2dcnk_: 2dcn K: [131384]
        Other proteins in same PDB: d2dcna1
        automated match to d1v19a_
        complexed with adp, ckp, k, mg
      11. 2137938Domain d2dcnl_: 2dcn L: [131385]
        Other proteins in same PDB: d2dcna1
        automated match to d1v19a_
        complexed with adp, ckp, k, mg
  31. 2137945Thermococcus litoralis [TaxId:2265] [226717] (2 PDB entries)
    1. Domain for 4b8r:
    2. Domain for 4b8s:
  32. 2137948Trypanosoma brucei [TaxId:185431] [195074] (1 PDB entry)
  33. 2137950Trypanosoma brucei [TaxId:31286] [226169] (1 PDB entry)
  34. 2137952Trypanosoma brucei [TaxId:999953] [236068] (2 PDB entries)
    1. Domain for 4n08:
    2. Domains for 4n09:
      1. 2137954Domain d4n09a_: 4n09 A: [236793]
        automated match to d4n08a_
        complexed with adn, adp, edo
      2. 2137955Domain d4n09b_: 4n09 B: [236796]
        automated match to d4n08a_
        complexed with adn, adp, edo
      3. 2137956Domain d4n09c_: 4n09 C: [236794]
        automated match to d4n08a_
        complexed with adn, adp, edo
      4. 2137957Domain d4n09d_: 4n09 D: [236795]
        automated match to d4n08a_
        complexed with adn, adp, edo
  35. 2137958Trypanosome (Trypanosoma brucei) [TaxId:5691] [226162] (1 PDB entry)
  36. 2137961Vibrio cholerae [TaxId:345073] [269172] (6 PDB entries)
    1. Domains for 4xck:
      1. 2137966Domain d4xcka_: 4xck A: [269173]
        automated match to d1rk2b_
        complexed with adp, cs, rib
      2. 2137967Domain d4xckb_: 4xck B: [269178]
        automated match to d1rk2b_
        complexed with adp, cs, rib
      3. 2137968Domain d4xckc_: 4xck C: [269175]
        automated match to d1rk2b_
        complexed with adp, cs, rib
      4. 2137969Domain d4xckd_: 4xck D: [269182]
        automated match to d1rk2b_
        complexed with adp, cs, rib
    2. Domains for 4xda:
      1. 2137962Domain d4xdaa_: 4xda A: [270119]
        automated match to d1rk2b_
        complexed with adp, na, rib
      2. 2137963Domain d4xdab_: 4xda B: [270121]
        automated match to d1rk2b_
        complexed with adp, na, rib
      3. 2137964Domain d4xdac_: 4xda C: [270120]
        automated match to d1rk2b_
        complexed with adp, na, rib
      4. 2137965Domain d4xdad_: 4xda D: [270124]
        automated match to d1rk2b_
        complexed with adp, na, rib
    3. Domains for 5ey7:
      1. 2283330Domain d5ey7a_: 5ey7 A: [326631]
        automated match to d1v1aa_
        complexed with na
      2. 2283331Domain d5ey7b_: 5ey7 B: [326632]
        automated match to d1v1aa_
        complexed with na
    4. Domain for 5eyn:
    5. Domain for 5f0z:
    6. Domain for 5f11:
  37. 2137970Xylella fastidiosa [TaxId:183190] [189265] (2 PDB entries)
    1. Domains for 3ljs:
      1. 2137971Domain d3ljsa1: 3ljs A:12-338 [180328]
        Other proteins in same PDB: d3ljsa2, d3ljsb2
        automated match to d1tyyb_
        complexed with po4
      2. 2137972Domain d3ljsb1: 3ljs B:12-338 [180329]
        Other proteins in same PDB: d3ljsa2, d3ljsb2
        automated match to d1tyyb_
        complexed with po4
    2. Domains for 3lki:
      1. 2137973Domain d3lkia1: 3lki A:12-338 [180344]
        Other proteins in same PDB: d3lkia2, d3lkia3, d3lkib2, d3lkib3
        automated match to d1tyyb_
        complexed with atp, k, po4
      2. 2137974Domain d3lkib1: 3lki B:12-338 [180345]
        Other proteins in same PDB: d3lkia2, d3lkia3, d3lkib2, d3lkib3
        automated match to d1tyyb_
        complexed with atp, k, po4
  38. 2269412Staphylococcus aureus [TaxId:282458] [312718] (3 PDB entries)
    1. Domains for 5cga:
      1. 2269413Domain d5cgah_: 5cga H: [312719]
        Other proteins in same PDB: d5cgaa2, d5cgae2
        automated match to d3hpda_
        complexed with kp6, mg
      2. 2269436Domain d5cgac_: 5cga C: [312742]
        Other proteins in same PDB: d5cgaa2, d5cgae2
        automated match to d3hpda_
        complexed with kp6, mg
      3. 2269438Domain d5cgaf_: 5cga F: [312744]
        Other proteins in same PDB: d5cgaa2, d5cgae2
        automated match to d3hpda_
        complexed with kp6, mg
      4. 2269517Domain d5cgab_: 5cga B: [312823]
        Other proteins in same PDB: d5cgaa2, d5cgae2
        automated match to d3hpda_
        complexed with kp6, mg
      5. 2269560Domain d5cgae1: 5cga E:1-263 [312864]
        Other proteins in same PDB: d5cgaa2, d5cgae2
        automated match to d3hpda_
        complexed with kp6, mg
      6. 2269575Domain d5cgaa1: 5cga A:1-263 [312879]
        Other proteins in same PDB: d5cgaa2, d5cgae2
        automated match to d3hpda_
        complexed with kp6, mg
    2. Domains for 5cge:
      1. 2269478Domain d5cged_: 5cge D: [312784]
        Other proteins in same PDB: d5cgea2, d5cgee2
        automated match to d3hpda_
        complexed with 51f, mg
      2. 2269484Domain d5cgea1: 5cge A:1-263 [312790]
        Other proteins in same PDB: d5cgea2, d5cgee2
        automated match to d3hpda_
        complexed with 51f, mg
      3. 2269487Domain d5cgee1: 5cge E:1-263 [312793]
        Other proteins in same PDB: d5cgea2, d5cgee2
        automated match to d3hpda_
        complexed with 51f, mg
      4. 2269518Domain d5cgeb_: 5cge B: [312824]
        Other proteins in same PDB: d5cgea2, d5cgee2
        automated match to d3hpda_
        complexed with 51f, mg
      5. 2269525Domain d5cgef_: 5cge F: [312830]
        Other proteins in same PDB: d5cgea2, d5cgee2
        automated match to d3hpda_
        complexed with 51f, mg
      6. 2269600Domain d5cgec_: 5cge C: [312905]
        Other proteins in same PDB: d5cgea2, d5cgee2
        automated match to d3hpda_
        complexed with 51f, mg
    3. Domains for 5cm5:
      1. 2269512Domain d5cm5c_: 5cm5 C: [312818]
        Other proteins in same PDB: d5cm5b2, d5cm5d2
        automated match to d3hpda_
      2. 2269527Domain d5cm5f_: 5cm5 F: [312832]
        Other proteins in same PDB: d5cm5b2, d5cm5d2
        automated match to d3hpda_
      3. 2269581Domain d5cm5e_: 5cm5 E: [312885]
        Other proteins in same PDB: d5cm5b2, d5cm5d2
        automated match to d3hpda_
      4. 2269616Domain d5cm5a_: 5cm5 A: [312921]
        Other proteins in same PDB: d5cm5b2, d5cm5d2
        automated match to d3hpda_
      5. 2269630Domain d5cm5b1: 5cm5 B:1-263 [312935]
        Other proteins in same PDB: d5cm5b2, d5cm5d2
        automated match to d3hpda_
      6. 2269650Domain d5cm5d1: 5cm5 D:1-263 [312955]
        Other proteins in same PDB: d5cm5b2, d5cm5d2
        automated match to d3hpda_
  39. 2277638Pseudomonas aeruginosa [TaxId:208964] [320939] (1 PDB entry)
  40. 2283008Burkholderia multivorans [TaxId:395019] [326309] (1 PDB entry)

More info for Protein automated matches from c.72.1.0: automated matches

Timeline for Protein automated matches from c.72.1.0: automated matches: