Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2004058Fold a.102: alpha/alpha toroid [48207] (6 superfamilies)
    multihelical; up to seven alpha-hairpins are arranged in closed circular array; there may be sequence similarities between different superfamilies
  4. 2004059Superfamily a.102.1: Six-hairpin glycosidases [48208] (10 families) (S)
  5. 2004283Family a.102.1.0: automated matches [191318] (1 protein)
    not a true family
  6. 2004284Protein automated matches [190108] (16 species)
    not a true protein

Species:

  1. 2004285Anabaena sp. [TaxId:360069] [230753] (1 PDB entry)
  2. 2004288Bacillus halodurans [TaxId:272558] [186832] (1 PDB entry)
  3. 2004290Clostridium acetobutylicum [TaxId:272562] [274794] (1 PDB entry)
  4. 2004293Clostridium cellulovorans [TaxId:1493] [256855] (3 PDB entries)
    1. Domain for 4xwl:
    2. Domain for 4xwm:
    3. Domain for 4xwn:
  5. 2004297Clostridium thermocellum [TaxId:1515] [255683] (1 PDB entry)
  6. 2004299Pneumococcus (Streptococcus pneumoniae) [TaxId:1313] [189664] (3 PDB entries)
    1. Domains for 3qpf:
      1. 2004304Domain d3qpfa_: 3qpf A: [184553]
        automated match to d2nvpa1
        complexed with edo
      2. 2004305Domain d3qpfb_: 3qpf B: [184554]
        automated match to d2nvpa1
        complexed with edo
    2. Domains for 3qry:
      1. 2004300Domain d3qrya_: 3qry A: [184599]
        automated match to d2nvpa1
        complexed with dmj, edo
      2. 2004301Domain d3qryb_: 3qry B: [184600]
        automated match to d2nvpa1
        complexed with dmj, edo
    3. Domains for 3qsp:
      1. 2004302Domain d3qspa_: 3qsp A: [184611]
        automated match to d2nvpa1
        complexed with edo
      2. 2004303Domain d3qspb_: 3qsp B: [184612]
        automated match to d2nvpa1
        complexed with edo
  7. 2004306Rhodothermus marinus [TaxId:29549] [230219] (4 PDB entries)
    1. Domain for 3wkf:
    2. Domain for 3wkg:
    3. Domain for 3wkh:
    4. Domain for 3wki:
  8. 2004311Streptococcus agalactiae [TaxId:1311] [225654] (1 PDB entry)
  9. 2004313Streptococcus agalactiae [TaxId:211110] [226492] (2 PDB entries)
    1. Domains for 3vxd:
      1. 2004314Domain d3vxda_: 3vxd A: [218140]
        automated match to d2fv1a_
        complexed with so4; mutant
      2. 2004315Domain d3vxdb_: 3vxd B: [218141]
        automated match to d2fv1a_
        complexed with so4; mutant
      3. 2004316Domain d3vxdc_: 3vxd C: [218142]
        automated match to d2fv1a_
        complexed with so4; mutant
      4. 2004317Domain d3vxdd_: 3vxd D: [218143]
        automated match to d2fv1a_
        complexed with so4; mutant
    2. Domain for 3wux:
  10. 2004319Streptococcus agalactiae [TaxId:216495] [225979] (3 PDB entries)
    1. Domain for 3ani:
    2. Domain for 3anj:
    3. Domain for 3ank:
  11. 2004323Worm (Eisenia fetida) [TaxId:6396] [256152] (1 PDB entry)
  12. 2272250Caldicellulosiruptor saccharolyticus [TaxId:351627] [315551] (2 PDB entries)
    1. Domain for 4z4j:
    2. Domain for 4z4l:
  13. 2275857Perinereis brevicirris [TaxId:6356] [319158] (2 PDB entries)
    1. Domains for 4zg8:
      1. 2275858Domain d4zg8a_: 4zg8 A: [319159]
        automated match to d1ia6a_
        complexed with btb, ca, cl, na
      2. 2275888Domain d4zg8b_: 4zg8 B: [319189]
        automated match to d1ia6a_
        complexed with btb, ca, cl, na
    2. Domains for 4zh5:
      1. 2275878Domain d4zh5b_: 4zh5 B: [319179]
        automated match to d1ia6a_
        complexed with bgc, ca, cl, na
      2. 2275884Domain d4zh5a_: 4zh5 A: [319185]
        automated match to d1ia6a_
        complexed with bgc, ca, cl, na
  14. 2277006Raoultella ornithinolytica [TaxId:54291] [320307] (1 PDB entry)
  15. 2284030Klebsiella pneumoniae [TaxId:573] [327331] (1 PDB entry)
  16. 2286981Paenibacillus sp. [TaxId:1392929] [330282] (2 PDB entries)
    1. Domains for 5x3a:
      1. 2286982Domain d5x3ab_: 5x3a B: [330283]
        automated match to d1v5da_
        complexed with ace, peg, pge
      2. 2287003Domain d5x3aa_: 5x3a A: [330304]
        automated match to d1v5da_
        complexed with ace, peg, pge
    2. Domains for 5xd0:
      1. 2290048Domain d5xd0b_: 5xd0 B: [333349]
        automated match to d1v5da_
        complexed with peg, pge
      2. 2290049Domain d5xd0a_: 5xd0 A: [333350]
        automated match to d1v5da_
        complexed with peg, pge

More info for Protein automated matches from a.102.1.0: automated matches

Timeline for Protein automated matches from a.102.1.0: automated matches: