Species:

1. Arthrobacter sp. [TaxId:1667] [194804] (11 PDB entries)

   1. Domains for 3r32:

      1. Domain d3r32a_: 3r32 A: [195713] automated match to d1q4ta_ complexed with 4co; mutant

      2. Domain d3r32b_: 3r32 B: [195712] automated match to d1q4ta_ complexed with 4co; mutant

   2. Domains for 3r34:

      1. Domain d3r34a_: 3r34 A: [195717] automated match to d1q4ta_ complexed with coa, edo; mutant

      2. Domain d3r34b_: 3r34 B: [195716] automated match to d1q4ta_ complexed with coa, edo; mutant

   3. Domains for 3r35:

      1. Domain d3r35a_: 3r35 A: [195715] automated match to d1q4ta_ complexed with 4co; mutant

      2. Domain d3r35b_: 3r35 B: [195714] automated match to d1q4ta_ complexed with 4co; mutant

   4. Domains for 3r36:

      1. Domain d3r36a_: 3r36 A: [215561] automated match to d3r37b_ complexed with phb; mutant

      2. Domain d3r36b_: 3r36 B: [215562] automated match to d3r37b_ complexed with phb; mutant

   5. Domains for 3r37:

      1. Domain d3r37a_: 3r37 A: [195707] automated match to d1q4ta_ complexed with 4co; mutant

      2. Domain d3r37b_: 3r37 B: [195706] automated match to d1q4ta_ complexed with 4co; mutant

   6. Domains for 3r3a:

      1. Domain d3r3aa_: 3r3a A: [215563] automated match to d3r3ba_ complexed with coa, phb; mutant

      2. Domain d3r3ab_: 3r3a B: [215564] automated match to d3r3bb_ complexed with coa, phb; mutant

   7. Domains for 3r3b:

      1. Domain d3r3ba_: 3r3b A: [195703] automated match to d1q4ta_ complexed with 4co; mutant

      2. Domain d3r3bb_: 3r3b B: [195702] automated match to d1q4ta_ complexed with 4co; mutant

   8. Domains for 3r3c:

      1. Domain d3r3ca_: 3r3c A: [195705] automated match to d1q4ta_ complexed with 4co; mutant

      2. Domain d3r3cb_: 3r3c B: [195704] automated match to d1q4ta_ complexed with 4co; mutant

   9. Domains for 3r3d:

      1. Domain d3r3da_: 3r3d A: [195708] automated match to d1q4ta_ complexed with 4co; mutant

      2. Domain d3r3db_: 3r3d B: [195709] automated match to d1q4ta_ complexed with 4co; mutant

   10. Domains for 3r3f:

       1. Domain d3r3fa_: 3r3f A: [195711] automated match to d1q4ta_ complexed with 4co; mutant

       2. Domain d3r3fb_: 3r3f B: [195710] automated match to d1q4ta_ complexed with 4co; mutant

   11. Domains for 3tea:

       1. Domain d3teaa_: 3tea A: [194805] automated match to d1q4ta_ complexed with 4co; mutant

       2. Domain d3teab_: 3tea B: [200795] automated match to d3teaa_ complexed with 4co; mutant

2. Escherichia coli [TaxId:83333] [257785] (2 PDB entries)

   1. Domains for 4k4c:

      1. Domain d4k4ca_: 4k4c A: [257786] automated match to d1vh9a_ complexed with 0fq

      2. Domain d4k4cb_: 4k4c B: [257787] automated match to d1vh9a_ complexed with 0fq

      3. Domain d4k4cc_: 4k4c C: [257789] automated match to d1vh9a_ complexed with 0fq

      4. Domain d4k4cd_: 4k4c D: [257788] automated match to d1vh9a_ complexed with 0fq

   2. Domains for 4k4d:

      1. Domain d4k4da_: 4k4d A: [259068] automated match to d1vh9a_ complexed with act, hfq, mli

      2. Domain d4k4db_: 4k4d B: [262793] automated match to d4k4ca_ complexed with act, hfq, mli

3. Haemophilus influenzae [TaxId:727] [186964] (1 PDB entry)

   • Domains for 2b6e:

     1. Domain d2b6ea_: 2b6e A: [127986] Other proteins in same PDB: d2b6eb3, d2b6ec3, d2b6ed3 automated match to d1o0ia_ complexed with acy

     2. Domain d2b6eb2: 2b6e B:1-138 [127987] Other proteins in same PDB: d2b6eb3, d2b6ec3, d2b6ed3 automated match to d1o0ia_ complexed with acy

     3. Domain d2b6ec2: 2b6e C:1-138 [127988] Other proteins in same PDB: d2b6eb3, d2b6ec3, d2b6ed3 automated match to d1o0ia_ complexed with acy

     4. Domain d2b6ed2: 2b6e D:1-140 [127989] Other proteins in same PDB: d2b6eb3, d2b6ec3, d2b6ed3 automated match to d1o0ia_ complexed with acy

     5. Domain d2b6ee_: 2b6e E: [127990] Other proteins in same PDB: d2b6eb3, d2b6ec3, d2b6ed3 automated match to d1o0ia_ complexed with acy

     6. Domain d2b6ef_: 2b6e F: [127991] Other proteins in same PDB: d2b6eb3, d2b6ec3, d2b6ed3 automated match to d1o0ia_ complexed with acy

     7. Domain d2b6eg_: 2b6e G: [127992] Other proteins in same PDB: d2b6eb3, d2b6ec3, d2b6ed3 automated match to d1o0ia_ complexed with acy

     8. Domain d2b6eh_: 2b6e H: [127993] Other proteins in same PDB: d2b6eb3, d2b6ec3, d2b6ed3 automated match to d1o0ia_ complexed with acy

4. Human (Homo sapiens) [TaxId:9606] [187682] (2 PDB entries)

   1. Domains for 2f0x:

      1. Domain d2f0xb_: 2f0x B: [132674] Other proteins in same PDB: d2f0xa1 automated match to d2f0xa1 complexed with so4

      2. Domain d2f0xc_: 2f0x C: [132675] Other proteins in same PDB: d2f0xa1 automated match to d2f0xa1 complexed with so4

      3. Domain d2f0xd_: 2f0x D: [132676] Other proteins in same PDB: d2f0xa1 automated match to d2f0xa1 complexed with so4

      4. Domain d2f0xe_: 2f0x E: [132677] Other proteins in same PDB: d2f0xa1 automated match to d2f0xa1 complexed with so4

      5. Domain d2f0xf_: 2f0x F: [132678] Other proteins in same PDB: d2f0xa1 automated match to d2f0xa1 complexed with so4

      6. Domain d2f0xg_: 2f0x G: [132679] Other proteins in same PDB: d2f0xa1 automated match to d2f0xa1 complexed with so4

      7. Domain d2f0xh_: 2f0x H: [132680] Other proteins in same PDB: d2f0xa1 automated match to d2f0xa1 complexed with so4

   2. Domains for 3f5o:

      1. Domain d3f5oa_: 3f5o A: [175478] automated match to d2f0xa1 complexed with cl, coa, p6g, uoc

      2. Domain d3f5ob_: 3f5o B: [175479] automated match to d2f0xa1 complexed with cl, coa, p6g, uoc

      3. Domain d3f5oc_: 3f5o C: [175480] automated match to d2f0xa1 complexed with cl, coa, p6g, uoc

      4. Domain d3f5od_: 3f5o D: [175481] automated match to d2f0xa1 complexed with cl, coa, p6g, uoc

      5. Domain d3f5oe_: 3f5o E: [175482] automated match to d2f0xa1 complexed with cl, coa, p6g, uoc

      6. Domain d3f5of_: 3f5o F: [175483] automated match to d2f0xa1 complexed with cl, coa, p6g, uoc

      7. Domain d3f5og_: 3f5o G: [175484] automated match to d2f0xa1 complexed with cl, coa, p6g, uoc

      8. Domain d3f5oh_: 3f5o H: [175485] automated match to d2f0xa1 complexed with cl, coa, p6g, uoc

5. Mouse (Mus musculus) [TaxId:10090] [187583] (1 PDB entry)

   • Domain for 2cy9:

     • Domain d2cy9b_: 2cy9 B: [131020] Other proteins in same PDB: d2cy9a1 automated match to d2cy9a1

6. Thermus thermophilus HB8 [TaxId:300852] [186824] (5 PDB entries)

   1. Domain for 1wlu:

      • Domain d1wlua_: 1wlu A: [121015] automated match to d1j1ya_ complexed with cl, gol

   2. Domains for 1wlv:

      1. Domain d1wlva_: 1wlv A: [121016] automated match to d1j1ya_ complexed with act, cl, coa

      2. Domain d1wlvb_: 1wlv B: [121017] automated match to d1j1ya_ complexed with act, cl, coa

      3. Domain d1wlvc_: 1wlv C: [121018] automated match to d1j1ya_ complexed with act, cl, coa

      4. Domain d1wlvd_: 1wlv D: [121019] automated match to d1j1ya_ complexed with act, cl, coa

      5. Domain d1wlve_: 1wlv E: [121020] automated match to d1j1ya_ complexed with act, cl, coa

      6. Domain d1wlvf_: 1wlv F: [121021] automated match to d1j1ya_ complexed with act, cl, coa

      7. Domain d1wlvg_: 1wlv G: [121022] automated match to d1j1ya_ complexed with act, cl, coa

      8. Domain d1wlvh_: 1wlv H: [121023] automated match to d1j1ya_ complexed with act, cl, coa

   3. Domains for 1wm6:

      1. Domain d1wm6a_: 1wm6 A: [121029] automated match to d1j1ya_ complexed with cl

      2. Domain d1wm6b_: 1wm6 B: [121030] automated match to d1j1ya_ complexed with cl

      3. Domain d1wm6c_: 1wm6 C: [121031] automated match to d1j1ya_ complexed with cl

      4. Domain d1wm6d_: 1wm6 D: [121032] automated match to d1j1ya_ complexed with cl

      5. Domain d1wm6e_: 1wm6 E: [121033] automated match to d1j1ya_ complexed with cl

      6. Domain d1wm6f_: 1wm6 F: [121034] automated match to d1j1ya_ complexed with cl

      7. Domain d1wm6g_: 1wm6 G: [121035] automated match to d1j1ya_ complexed with cl

      8. Domain d1wm6h_: 1wm6 H: [121036] automated match to d1j1ya_ complexed with cl

   4. Domains for 1wn3:

      1. Domain d1wn3a_: 1wn3 A: [121074] automated match to d1j1ya_ complexed with act, cl, hxc

      2. Domain d1wn3b_: 1wn3 B: [121075] automated match to d1j1ya_ complexed with act, cl, hxc

      3. Domain d1wn3c_: 1wn3 C: [121076] automated match to d1j1ya_ complexed with act, cl, hxc

      4. Domain d1wn3d_: 1wn3 D: [121077] automated match to d1j1ya_ complexed with act, cl, hxc

      5. Domain d1wn3e_: 1wn3 E: [121078] automated match to d1j1ya_ complexed with act, cl, hxc

      6. Domain d1wn3f_: 1wn3 F: [121079] automated match to d1j1ya_ complexed with act, cl, hxc

      7. Domain d1wn3g_: 1wn3 G: [121080] automated match to d1j1ya_ complexed with act, cl, hxc

      8. Domain d1wn3h_: 1wn3 H: [121081] automated match to d1j1ya_ complexed with act, cl, hxc

   5. Domains for 2dsl:

      1. Domain d2dsla_: 2dsl A: [163681] automated match to d1j1ya_ complexed with cl, mg; mutant

      2. Domain d2dslb_: 2dsl B: [163682] automated match to d1j1ya_ complexed with cl, mg; mutant

7. Zebrafish (Danio rerio) [TaxId:7955] [311409] (1 PDB entry)

   • Domains for 4ord:

     1. Domain d4orda1: 4ord A:3-139 [307938] Other proteins in same PDB: d4orda2, d4ordb2, d4ordc2, d4ordd2 automated match to d2cy9b_

     2. Domain d4ordb1: 4ord B:3-139 [307940] Other proteins in same PDB: d4orda2, d4ordb2, d4ordc2, d4ordd2 automated match to d2cy9b_

     3. Domain d4ordc1: 4ord C:3-139 [307942] Other proteins in same PDB: d4orda2, d4ordb2, d4ordc2, d4ordd2 automated match to d2cy9b_

     4. Domain d4ordd1: 4ord D:3-139 [307944] Other proteins in same PDB: d4orda2, d4ordb2, d4ordc2, d4ordd2 automated match to d2cy9b_

More info for Protein automated matches from d.38.1.5: PaaI/YdiI-like

Timeline for Protein automated matches from d.38.1.5: PaaI/YdiI-like:

• Protein automated matches from d.38.1.5: PaaI/YdiI-like first appeared in SCOPe 2.01
  
• Protein automated matches from d.38.1.5: PaaI/YdiI-like appears in SCOPe 2.05
  
• Protein automated matches from d.38.1.5: PaaI/YdiI-like appears in SCOPe 2.07
  
• Protein automated matches from d.38.1.5: PaaI/YdiI-like appears in the current release, SCOPe 2.08