Lineage for Protein: automated matches

  1. Root: SCOPe 2.01
  2. 968085Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
  3. 968086Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 969862Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 971534Family c.1.8.0: automated matches [191314] (1 protein)
    not a true family
  6. 971535Protein automated matches [190075] (16 species)
    not a true protein

Species:

  1. 971536Anthrax bacillus (Bacillus anthracis) [TaxId:1392] [189358] (1 PDB entry)
  2. 971538Aspergillus fumigatus [TaxId:330879] [189460] (1 PDB entry)
  3. 971545Aspergillus fumigatus [TaxId:451804] [189778] (2 PDB entries)
    1. Domains for 2xtk:
      1. 971548Domain d2xtka_: 2xtk A: [170379]
        automated match to d1hvqa_
        complexed with azm, po4
      2. 971549Domain d2xtkb_: 2xtk B: [170380]
        automated match to d1hvqa_
        complexed with azm, po4
    2. Domains for 2xvp:
      1. 971546Domain d2xvpa_: 2xvp A: [170428]
        automated match to d1hvqa_
        complexed with po4
      2. 971547Domain d2xvpb_: 2xvp B: [170429]
        automated match to d1hvqa_
        complexed with po4
  4. 971550Aspergillus fumigatus [TaxId:5085] [189545] (2 PDB entries)
    1. Domains for 2xuc:
      1. 971551Domain d2xuca_: 2xuc A: [170383]
        automated match to d1hvqa_
        complexed with cl, po4, xrg
      2. 971552Domain d2xucb_: 2xuc B: [170384]
        automated match to d1hvqa_
        complexed with cl, po4, xrg
      3. 971553Domain d2xucc_: 2xuc C: [170385]
        automated match to d1hvqa_
        complexed with cl, po4, xrg
    2. Domains for 2xvn:
      1. 971554Domain d2xvna_: 2xvn A: [170425]
        automated match to d1hvqa_
        complexed with cl, kls
      2. 971555Domain d2xvnb_: 2xvn B: [170426]
        automated match to d1hvqa_
        complexed with cl, kls
      3. 971556Domain d2xvnc_: 2xvn C: [170427]
        automated match to d1hvqa_
        complexed with cl, kls
  5. 971557Bacillus anthracis [TaxId:198094] [188951] (1 PDB entry)
  6. 971559Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [188036] (4 PDB entries)
    1. Domain for 2uy2:
    2. Domain for 2uy3:
    3. Domain for 2uy4:
    4. Domain for 2uy5:
  7. 971564Clostridium stercorarium [TaxId:1510] [187615] (1 PDB entry)
  8. 971567Lactobacillus plantarum [TaxId:1590] [189663] (1 PDB entry)
  9. 971569Neotermes koshunensis [TaxId:60586] [189411] (2 PDB entries)
    1. Domain for 3ahz:
    2. Domain for 3ai0:
  10. 971572Paenibacillus polymyxa [TaxId:1406] [187337] (5 PDB entries)
    1. Domain for 2jie:
    2. Domain for 2o9p:
    3. Domain for 2o9r:
    4. Domain for 2o9t:
    5. Domain for 2z1s:
  11. 971578Rauvolfia serpentina [TaxId:4060] [189830] (3 PDB entries)
    1. Domains for 3u57:
      1. 971583Domain d3u57a_: 3u57 A: [186080]
        automated match to d1cbga_
        complexed with cl, dh8
      2. 971584Domain d3u57b_: 3u57 B: [186081]
        automated match to d1cbga_
        complexed with cl, dh8
    2. Domains for 3u5u:
      1. 971581Domain d3u5ua_: 3u5u A: [186088]
        automated match to d1cbga_
        complexed with cl
      2. 971582Domain d3u5ub_: 3u5u B: [186089]
        automated match to d1cbga_
        complexed with cl
    3. Domains for 3u5y:
      1. 971579Domain d3u5ya_: 3u5y A: [186091]
        automated match to d1cbga_
        complexed with cl, scg
      2. 971580Domain d3u5yb_: 3u5y B: [186092]
        automated match to d1cbga_
        complexed with cl, scg
  12. 971585Scadoxus multiflorus [TaxId:82246] [188826] (6 PDB entries)
    1. Domain for 3d5h:
    2. Domain for 3hu7:
    3. Domain for 3m7s:
    4. Domain for 3mu7:
    5. Domain for 3o9n:
    6. Domain for 3oih:
  13. 971592Thermobifida fusca [TaxId:2021] [187554] (2 PDB entries)
    1. Domains for 2ckr:
      1. 971595Domain d2ckra_: 2ckr A: [163431]
        automated match to d1lf1a_
        complexed with ben, na, pg4, zn
      2. 971596Domain d2ckrb_: 2ckr B: [163432]
        automated match to d1lf1a_
        complexed with ben, na, pg4, zn
    2. Domains for 2cks:
      1. 971593Domain d2cksa_: 2cks A: [163433]
        automated match to d1lf1a_
        complexed with ben, na, zn
      2. 971594Domain d2cksb_: 2cks B: [163434]
        automated match to d1lf1a_
        complexed with ben, na, zn
  14. 971597Thermotoga maritima [TaxId:2336] [186796] (2 PDB entries)
    1. Domain for 1vbr:
    2. Domains for 1vbu:
      1. 971598Domain d1vbua_: 1vbu A: [119963]
        automated match to d1xyza_
        complexed with acy, gol, so4
      2. 971599Domain d1vbub_: 1vbu B: [119964]
        automated match to d1xyza_
        complexed with acy, gol, so4
  15. 971601Uncultured bacterium [TaxId:77133] [188624] (1 PDB entry)
  16. 971603Vespula vulgaris [TaxId:7454] [187426] (1 PDB entry)

More info for Protein automated matches from c.1.8.0: automated matches

Timeline for Protein automated matches from c.1.8.0: automated matches: