SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2128255Fold c.61: PRTase-like [53270] (1 superfamily)
    core: 3 layers, a/b/a; mixed beta-sheet of 6 strands, order 321456; strand 3 is antiparallel to the rest
  4. 2128256Superfamily c.61.1: PRTase-like [53271] (3 families) (S)
  5. 2128257Family c.61.1.1: Phosphoribosyltransferases (PRTases) [53272] (16 protein domains)
  6. 2128615Protein automated matches [190074] (12 species)
    not a true protein

Species:

  1. 2128616Bacillus subtilis [TaxId:1423] [261868] (1 PDB entry)
  2. 2128621Bacillus subtilis [TaxId:224308] [261871] (1 PDB entry)
  3. 2128623Burkholderia pseudomallei [TaxId:28450] [188498] (1 PDB entry)
  4. 2128628Human (Homo sapiens) [TaxId:9606] [187905] (1 PDB entry)
  5. 2128631Malaria parasite (Plasmodium falciparum) [TaxId:5833] [188472] (1 PDB entry)
  6. 2128634Thermoanaerobacter tengcongensis [TaxId:119072] [187747] (1 PDB entry)
  7. 2128636Thermus thermophilus HB8 [TaxId:300852] [186795] (1 PDB entry)
  8. 2128640Thermus thermophilus [TaxId:274] [188051] (1 PDB entry)
  9. 2128645Vibrio cholerae [TaxId:666] [189453] (1 PDB entry)
  10. 2270766Trypanosoma cruzi [TaxId:353153] [314071] (1 PDB entry)
  11. 2271747Mycobacterium tuberculosis [TaxId:419947] [315048] (1 PDB entry)
  12. 2285183Plasmodium vivax [TaxId:5855] [328484] (1 PDB entry)

More info for Protein automated matches from c.61.1.1: Phosphoribosyltransferases (PRTases)

Timeline for Protein automated matches from c.61.1.1: Phosphoribosyltransferases (PRTases):