Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2006336Fold a.118: alpha-alpha superhelix [48370] (25 superfamilies)
    multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix
  4. 2006337Superfamily a.118.1: ARM repeat [48371] (26 families) (S)
  5. 2006338Family a.118.1.1: Armadillo repeat [48372] (7 protein domains)
  6. 2006450Protein automated matches [190070] (4 species)
    not a true protein

Species:

  1. 2006451Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [187009] (3 PDB entries)
    1. Domains for 2c1t:
      1. 2006455Domain d2c1ta_: 2c1t A: [129642]
        automated match to d1un0a_
      2. 2006456Domain d2c1tb_: 2c1t B: [129643]
        automated match to d1un0a_
    2. Domains for 3ea5:
      1. 2006452Domain d3ea5b_: 3ea5 B: [158074]
        Other proteins in same PDB: d3ea5a_, d3ea5c_
        automated match to d2bkub1
        complexed with gdp, mg
      2. 2006453Domain d3ea5d_: 3ea5 D: [158075]
        Other proteins in same PDB: d3ea5a_, d3ea5c_
        automated match to d2bkub1
        complexed with gdp, mg
    3. Domain for 3nd2:
  2. 2006457Human (Homo sapiens) [TaxId:9606] [187211] (12 PDB entries)
    1. Domains for 2h4m:
      1. 2006469Domain d2h4ma_: 2h4m A: [242001]
        automated match to d1qbkb_
      2. 2006470Domain d2h4mb_: 2h4m B: [242002]
        automated match to d1qbkb_
    2. Domains for 2qmr:
      1. 2006471Domain d2qmra_: 2qmr A: [243591]
        automated match to d1qbkb_
      2. 2006472Domain d2qmrb_: 2qmr B: [243592]
        automated match to d1qbkb_
      3. 2006473Domain d2qmrc_: 2qmr C: [243593]
        automated match to d1qbkb_
      4. 2006474Domain d2qmrd_: 2qmr D: [243594]
        automated match to d1qbkb_
    3. Domain for 2z5k:
    4. Domain for 2z6h:
    5. Domains for 3ifq:
      1. 2006461Domain d3ifqa_: 3ifq A: [211662]
        automated match to d1i7xa_
        complexed with so4
      2. 2006462Domain d3ifqb_: 3ifq B: [211663]
        automated match to d1i7xa_
        complexed with so4
    6. Domain for 3tx7:
    7. Domains for 3wpt:
      1. 2006465Domain d3wpta_: 3wpt A: [268048]
        automated match to d3knda_
        complexed with peg
      2. 2006466Domain d3wptb_: 3wpt B: [268047]
        automated match to d3knda_
        complexed with peg
    8. Domain for 4djs:
    9. Domains for 4e4v:
      1. 2006459Domain d4e4va1: 4e4v A:70-497 [251663]
        Other proteins in same PDB: d4e4va2, d4e4vb2
        automated match to d1q1sc_
        complexed with dtt, gol
      2. 2006460Domain d4e4vb1: 4e4v B:70-497 [251664]
        Other proteins in same PDB: d4e4va2, d4e4vb2
        automated match to d1q1sc_
        complexed with dtt, gol
    10. Domain for 4fq3:
    11. Domain for 5h43:
    12. Domain for 5tqc:
  3. 2006475Mouse (Mus musculus) [TaxId:10090] [186790] (4 PDB entries)
    1. Domain for 1v18:
    2. Domain for 2c1m:
    3. Domain for 3btr:
    4. Domain for 3zin:
  4. 2283825Saccharomyces cerevisiae [TaxId:559292] [327126] (3 PDB entries)
    1. Domains for 5h2w:
      1. 2283826Domain d5h2wa_: 5h2w A: [327127]
        automated match to d2c1ta_
      2. 2283844Domain d5h2wc_: 5h2w C: [327145]
        automated match to d2c1ta_
    2. Domain for 5h2x:
    3. Domain for 5owu:

More info for Protein automated matches from a.118.1.1: Armadillo repeat

Timeline for Protein automated matches from a.118.1.1: Armadillo repeat: