Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2007940Fold a.104: Cytochrome P450 [48263] (1 superfamily)
    multihelical
  4. 2007941Superfamily a.104.1: Cytochrome P450 [48264] (2 families) (S)
  5. 2007942Family a.104.1.1: Cytochrome P450 [48265] (23 proteins)
  6. 2008494Protein automated matches [190068] (9 species)
    not a true protein

Species:

  1. 2008495Bacillus megaterium [TaxId:1348623] [323366] (4 PDB entries)
    1. Domains for 5jq2:
      1. 2008498Domain d5jq2a_: 5jq2 A: [323967]
        automated match to d2uwha_
        complexed with 140, hem, ru8; mutant
      2. 2008499Domain d5jq2b_: 5jq2 B: [323971]
        automated match to d2uwha_
        complexed with 140, hem, ru8; mutant
    2. Domains for 5jqu:
      1. 2008500Domain d5jqua_: 5jqu A: [323444]
        automated match to d2uwha_
        complexed with fde
      2. 2008501Domain d5jqub_: 5jqu B: [323367]
        automated match to d2uwha_
        complexed with fde
      3. 2008502Domain d5jquc_: 5jqu C: [323380]
        automated match to d2uwha_
        complexed with fde
      4. 2008503Domain d5jqud_: 5jqu D: [323434]
        automated match to d2uwha_
        complexed with fde
      5. 2008504Domain d5jque_: 5jqu E: [323486]
        automated match to d2uwha_
        complexed with fde
      6. 2008505Domain d5jquf_: 5jqu F: [323404]
        automated match to d2uwha_
        complexed with fde
      7. 2008506Domain d5jqug_: 5jqu G: [323405]
        automated match to d2uwha_
        complexed with fde
      8. 2008507Domain d5jquh_: 5jqu H: [323411]
        automated match to d2uwha_
        complexed with fde
    3. Domains for 5jqv:
      1. 2008508Domain d5jqva_: 5jqv A: [323372]
        automated match to d2uwha_
        complexed with fde
      2. 2008509Domain d5jqvb_: 5jqv B: [323413]
        automated match to d2uwha_
        complexed with fde
      3. 2008510Domain d5jqvc_: 5jqv C: [323383]
        automated match to d2uwha_
        complexed with fde
      4. 2008511Domain d5jqvd_: 5jqv D: [323428]
        automated match to d2uwha_
        complexed with fde
      5. 2008512Domain d5jqve_: 5jqv E: [323447]
        automated match to d2uwha_
        complexed with fde
      6. 2008513Domain d5jqvf_: 5jqv F: [323376]
        automated match to d2uwha_
        complexed with fde
      7. 2008514Domain d5jqvg_: 5jqv G: [323399]
        automated match to d2uwha_
        complexed with fde
      8. 2008515Domain d5jqvh_: 5jqv H: [323409]
        automated match to d2uwha_
        complexed with fde
    4. Domains for 5jtd:
      1. 2008496Domain d5jtda_: 5jtd A: [324005]
        automated match to d2uwha_
        complexed with dms, hem, ru8; mutant
      2. 2008497Domain d5jtdb_: 5jtd B: [323973]
        automated match to d2uwha_
        complexed with dms, hem, ru8; mutant
  2. 2008516Bacillus megaterium [TaxId:1404] [188479] (5 PDB entries)
    1. Domains for 3cbd:
      1. 2008523Domain d3cbda_: 3cbd A: [173119]
        automated match to d1bu7a_
        complexed with 140, hem
      2. 2008524Domain d3cbdb_: 3cbd B: [173120]
        automated match to d1bu7a_
        complexed with 140, hem
    2. Domains for 3hf2:
      1. 2008517Domain d3hf2a_: 3hf2 A: [211007]
        automated match to d1zoaa_
        complexed with hem; mutant
      2. 2008518Domain d3hf2b_: 3hf2 B: [211008]
        automated match to d1zoaa_
        complexed with hem; mutant
    3. Domains for 3m4v:
      1. 2008521Domain d3m4va_: 3m4v A: [213132]
        automated match to d1zoaa_
        complexed with hem; mutant
      2. 2008522Domain d3m4vb_: 3m4v B: [213133]
        automated match to d1zoaa_
        complexed with hem; mutant
    4. Domains for 4rsn:
      1. 2008525Domain d4rsna1: 4rsn A:0-455 [279757]
        Other proteins in same PDB: d4rsna2, d4rsnb2
        automated match to d4kpaa_
        complexed with hem; mutant
      2. 2008526Domain d4rsnb1: 4rsn B:0-455 [279758]
        Other proteins in same PDB: d4rsna2, d4rsnb2
        automated match to d4kpaa_
        complexed with hem; mutant
    5. Domains for 5ucw:
      1. 2008519Domain d5ucwa_: 5ucw A: [334390]
        automated match to d2uwha_
        complexed with hem
      2. 2008520Domain d5ucwb_: 5ucw B: [334272]
        automated match to d2uwha_
        complexed with hem
  3. 2008527Bacillus subtilis [TaxId:1423] [189037] (2 PDB entries)
    1. Domains for 2zqj:
      1. 2008531Domain d2zqja_: 2zqj A: [171427]
        automated match to d1izoa_
        complexed with hem
      2. 2008532Domain d2zqjb_: 2zqj B: [171428]
        automated match to d1izoa_
        complexed with hem
      3. 2008533Domain d2zqjc_: 2zqj C: [171429]
        automated match to d1izoa_
        complexed with hem
    2. Domains for 2zqx:
      1. 2008528Domain d2zqxa_: 2zqx A: [171442]
        automated match to d1izoa_
        complexed with hem
      2. 2008529Domain d2zqxb_: 2zqx B: [171443]
        automated match to d1izoa_
        complexed with hem
      3. 2008530Domain d2zqxc_: 2zqx C: [171444]
        automated match to d1izoa_
        complexed with hem
  4. 2008534Human (Homo sapiens) [TaxId:9606] [189507] (49 PDB entries)
    1. Domain for 3ibd:
    2. Domains for 3nxu:
      1. 2008538Domain d3nxua_: 3nxu A: [182615]
        automated match to d1w0ea_
        complexed with dms, hem, rit
      2. 2008539Domain d3nxub_: 3nxu B: [182616]
        automated match to d1w0ea_
        complexed with dms, hem, rit
    3. Domain for 3qoa:
    4. Domains for 3qu8:
      1. 2008561Domain d3qu8a1: 3qu8 A:28-491 [248990]
        Other proteins in same PDB: d3qu8a2, d3qu8b2, d3qu8c2, d3qu8e2
        automated match to d3ibda_
        complexed with 3qu, cm5, hem
      2. 2008562Domain d3qu8b1: 3qu8 B:28-491 [248991]
        Other proteins in same PDB: d3qu8a2, d3qu8b2, d3qu8c2, d3qu8e2
        automated match to d3ibda_
        complexed with 3qu, cm5, hem
      3. 2008563Domain d3qu8c1: 3qu8 C:28-491 [248992]
        Other proteins in same PDB: d3qu8a2, d3qu8b2, d3qu8c2, d3qu8e2
        automated match to d3ibda_
        complexed with 3qu, cm5, hem
      4. 2008564Domain d3qu8d_: 3qu8 D: [248993]
        Other proteins in same PDB: d3qu8a2, d3qu8b2, d3qu8c2, d3qu8e2
        automated match to d3ibda_
        complexed with 3qu, cm5, hem
      5. 2008565Domain d3qu8e1: 3qu8 E:28-491 [248994]
        Other proteins in same PDB: d3qu8a2, d3qu8b2, d3qu8c2, d3qu8e2
        automated match to d3ibda_
        complexed with 3qu, cm5, hem
      6. 2008566Domain d3qu8f_: 3qu8 F: [248995]
        Other proteins in same PDB: d3qu8a2, d3qu8b2, d3qu8c2, d3qu8e2
        automated match to d3ibda_
        complexed with 3qu, cm5, hem
    5. Domain for 3tjs:
    6. Domain for 3ua1:
    7. Domains for 3ua5:
      1. 2008572Domain d3ua5a1: 3ua5 A:28-491 [250163]
        Other proteins in same PDB: d3ua5a2, d3ua5b2
        automated match to d3ibda_
        complexed with 06x, hem
      2. 2008573Domain d3ua5b1: 3ua5 B:29-491 [250164]
        Other proteins in same PDB: d3ua5a2, d3ua5b2
        automated match to d3ibda_
        complexed with 06x, hem
    8. Domain for 4d6z:
    9. Domain for 4d75:
    10. Domain for 4d78:
    11. Domain for 4d7d:
    12. Domains for 4gqs:
      1. 2008578Domain d4gqsa1: 4gqs A:29-489 [202288]
        Other proteins in same PDB: d4gqsa2, d4gqsb2, d4gqsc2, d4gqsd2
        automated match to d4gqsb_
        complexed with 0xv, gol, hem
      2. 2008579Domain d4gqsb1: 4gqs B:29-489 [193379]
        Other proteins in same PDB: d4gqsa2, d4gqsb2, d4gqsc2, d4gqsd2
        automated match to d1r9oa_
        complexed with 0xv, gol, hem
      3. 2008580Domain d4gqsc1: 4gqs C:29-489 [202289]
        Other proteins in same PDB: d4gqsa2, d4gqsb2, d4gqsc2, d4gqsd2
        automated match to d4gqsb_
        complexed with 0xv, gol, hem
      4. 2008581Domain d4gqsd1: 4gqs D:29-489 [202290]
        Other proteins in same PDB: d4gqsa2, d4gqsb2, d4gqsc2, d4gqsd2
        automated match to d4gqsb_
        complexed with 0xv, gol, hem
    13. Domain for 4i3q:
    14. Domain for 4i4g:
    15. Domain for 4i4h:
    16. Domain for 4i91:
    17. Domain for 4k9t:
    18. Domain for 4k9u:
    19. Domain for 4k9v:
    20. Domains for 4k9w:
      1. 2008548Domain d4k9wa_: 4k9w A: [224227]
        automated match to d3ua1a_
        complexed with 7aw, hem
      2. 2008549Domain d4k9wb_: 4k9w B: [224228]
        automated match to d3ua1a_
        complexed with 7aw, hem
      3. 2008550Domain d4k9wc_: 4k9w C: [224229]
        automated match to d3ua1a_
        complexed with 7aw, hem
      4. 2008551Domain d4k9wd_: 4k9w D: [224230]
        automated match to d3ua1a_
        complexed with 7aw, hem
    21. Domain for 4k9x:
    22. Domain for 4ny4:
    23. Domains for 4rql:
      1. 2008552Domain d4rqla1: 4rql A:28-491 [268770]
        Other proteins in same PDB: d4rqla2, d4rqlb2
        automated match to d3g5nc_
        complexed with cm5, edo, hem, sne
      2. 2008553Domain d4rqlb1: 4rql B:28-491 [268769]
        Other proteins in same PDB: d4rqla2, d4rqlb2
        automated match to d3g5nc_
        complexed with cm5, edo, hem, sne
    24. Domains for 4rrt:
      1. 2008555Domain d4rrta_: 4rrt A: [268783]
        automated match to d3g5nc_
        complexed with 3v4, cm5, gol, hem
      2. 2008556Domain d4rrtb_: 4rrt B: [268775]
        automated match to d3g5nc_
        complexed with 3v4, cm5, gol, hem
    25. Domain for 5a1p:
    26. Domain for 5a1r:
    27. Domain for 5a5i:
    28. Domain for 5a5j:
    29. Domain for 5g5j:
    30. Domains for 5te8:
      1. 2008593Domain d5te8a_: 5te8 A: [327084]
        automated match to d1w0ea_
        complexed with 08j, hem
      2. 2008594Domain d5te8b_: 5te8 B: [327100]
        automated match to d1w0ea_
        complexed with 08j, hem
      3. 2008595Domain d5te8c_: 5te8 C: [327089]
        automated match to d1w0ea_
        complexed with 08j, hem
    31. Domain for 5vc0:
    32. Domain for 5vcc:
    33. Domain for 5vcd:
    34. Domain for 5vce:
    35. Domain for 5vcg:
    36. Domains for 5veu:
      1. 2008597Domain d5veua_: 5veu A: [341598]
        automated match to d1w0ea_
        complexed with hem, rit
      2. 2008598Domain d5veub_: 5veu B: [341644]
        automated match to d1w0ea_
        complexed with hem, rit
      3. 2008599Domain d5veuc_: 5veu C: [341626]
        automated match to d1w0ea_
        complexed with hem, rit
      4. 2008600Domain d5veud_: 5veu D: [341605]
        automated match to d1w0ea_
        complexed with hem, rit
      5. 2008601Domain d5veue_: 5veu E: [341635]
        automated match to d1w0ea_
        complexed with hem, rit
      6. 2008602Domain d5veuf_: 5veu F: [341645]
        automated match to d1w0ea_
        complexed with hem, rit
      7. 2008603Domain d5veug_: 5veu G: [341633]
        automated match to d1w0ea_
        complexed with hem, rit
      8. 2008604Domain d5veuh_: 5veu H: [341608]
        automated match to d1w0ea_
        complexed with hem, rit
      9. 2008605Domain d5veui_: 5veu I: [341594]
        automated match to d1w0ea_
        complexed with hem, rit
      10. 2008606Domain d5veuj_: 5veu J: [341637]
        automated match to d1w0ea_
        complexed with hem, rit
      11. 2008607Domain d5veuk_: 5veu K: [341597]
        automated match to d1w0ea_
        complexed with hem, rit
      12. 2008608Domain d5veul_: 5veu L: [341715]
        automated match to d1w0ea_
        complexed with hem, rit
    37. Domain for 5w0c:
    38. Domain for 5x23:
    39. Domain for 5x24:
    40. Domain for 5xxi:
    41. Domain for 6bcz:
    42. Domain for 6bd5:
    43. Domain for 6bd6:
    44. Domain for 6bd7:
    45. Domain for 6bd8:
    46. Domain for 6bdh:
    47. Domain for 6bdi:
    48. Domain for 6bdk:
    49. Domain for 6bdm:
  5. 2008612Mycobacterium tuberculosis [TaxId:1773] [187002] (1 PDB entry)
  6. 2008615Mycobacterium tuberculosis [TaxId:83332] [187210] (6 PDB entries)
    1. Domain for 2ci0:
    2. Domain for 2cib:
    3. Domain for 2vku:
    4. Domain for 2w09:
    5. Domain for 2w0a:
    6. Domain for 2w0b:
  7. 2008622Pseudomonas putida [TaxId:303] [186787] (9 PDB entries)
    1. Domains for 1uyu:
      1. 2008624Domain d1uyua_: 1uyu A: [119770]
        automated match to d1t87a_
        complexed with cam, hem, k, xe
      2. 2008625Domain d1uyub_: 1uyu B: [119771]
        automated match to d1t87a_
        complexed with cam, hem, k, xe
    2. Domain for 1yrc:
    3. Domains for 2frz:
      1. 2008626Domain d2frza_: 2frz A: [134001]
        automated match to d1t87a_
        complexed with hem, k; mutant
      2. 2008627Domain d2frzb_: 2frz B: [134002]
        automated match to d1t87a_
        complexed with hem, k; mutant
    4. Domains for 2gqx:
      1. 2008629Domain d2gqxa_: 2gqx A: [164806]
        automated match to d1akda_
        complexed with 5cl, hem, k; mutant
      2. 2008630Domain d2gqxb_: 2gqx B: [164807]
        automated match to d1akda_
        complexed with 5cl, hem, k; mutant
    5. Domains for 2gr6:
      1. 2008632Domain d2gr6a_: 2gr6 A: [164808]
        automated match to d1akda_
        complexed with hem, k; mutant
      2. 2008633Domain d2gr6b_: 2gr6 B: [164809]
        automated match to d1akda_
        complexed with hem, k; mutant
    6. Domain for 4kky:
    7. Domain for 5gxg:
    8. Domain for 5wk7:
    9. Domain for 5wk9:
  8. 2008636Streptomyces coelicolor [TaxId:100226] [187338] (8 PDB entries)
    1. Domains for 1se6:
      1. 2008638Domain d1se6a1: 1se6 A:5-404 [161712]
        Other proteins in same PDB: d1se6a2, d1se6b2
        automated match to d1s1fa_
        complexed with hem, mes, spk
      2. 2008639Domain d1se6b1: 1se6 B:5-404 [161713]
        Other proteins in same PDB: d1se6a2, d1se6b2
        automated match to d1s1fa_
        complexed with hem, mes, spk
    2. Domain for 1t93:
    3. Domain for 2d09:
    4. Domain for 2d0e:
    5. Domain for 2dkk:
    6. Domains for 2nz5:
      1. 2008644Domain d2nz5a1: 2nz5 A:13-407 [166462]
        Other proteins in same PDB: d2nz5a2, d2nz5b2
        automated match to d1s1fa_
        complexed with 226, hem
      2. 2008645Domain d2nz5b1: 2nz5 B:13-407 [166463]
        Other proteins in same PDB: d2nz5a2, d2nz5b2
        automated match to d1s1fa_
        complexed with 226, hem
    7. Domains for 2nza:
      1. 2008646Domain d2nzaa1: 2nza A:13-407 [166464]
        Other proteins in same PDB: d2nzaa2, d2nzab2
        automated match to d1s1fa_
        complexed with hem
      2. 2008647Domain d2nzab1: 2nza B:13-407 [166465]
        Other proteins in same PDB: d2nzaa2, d2nzab2
        automated match to d1s1fa_
        complexed with hem
    8. Domain for 5de9:
  9. 2008648Streptomyces coelicolor [TaxId:1902] [189873] (2 PDB entries)
    1. Domains for 3tzo:
      1. 2008649Domain d3tzoa1: 3tzo A:5-404 [186030]
        Other proteins in same PDB: d3tzoa2, d3tzob2
        automated match to d1s1fa_
        complexed with hem, spm
      2. 2008650Domain d3tzob1: 3tzo B:5-404 [186031]
        Other proteins in same PDB: d3tzoa2, d3tzob2
        automated match to d1s1fa_
        complexed with hem, spm
    2. Domain for 5de9:

More info for Protein automated matches from a.104.1.1: Cytochrome P450

Timeline for Protein automated matches from a.104.1.1: Cytochrome P450: