Lineage for Protein: automated matches

  1. Root: SCOPe 2.02
  2. 1074916Class a: All alpha proteins [46456] (284 folds)
  3. 1084172Fold a.25: Ferritin-like [47239] (6 superfamilies)
    core: 4 helices; bundle, closed, left-handed twist; 1 crossover connection
  4. 1084173Superfamily a.25.1: Ferritin-like [47240] (10 families) (S)
    contains bimetal-ion centre in the middle of the bundle
  5. 1084174Family a.25.1.1: Ferritin [47241] (10 proteins)
  6. 1084902Protein automated matches [190041] (21 species)
    not a true protein

Species:

  1. 1084903Archaeoglobus fulgidus [TaxId:2234] [189565] (1 PDB entry)
  2. 1084928Azotobacter vinelandii [TaxId:354] [186762] (3 PDB entries)
    1. Domains for 1sof:
      1. 1084937Domain d1sofb_: 1sof B: [118974]
        Other proteins in same PDB: d1sofa1
        automated match to d1bcfa_
        complexed with ba, fe2, hem, mg
      2. 1084938Domain d1sofc_: 1sof C: [118975]
        Other proteins in same PDB: d1sofa1
        automated match to d1bcfa_
        complexed with ba, fe2, hem, mg
      3. 1084939Domain d1sofd_: 1sof D: [118976]
        Other proteins in same PDB: d1sofa1
        automated match to d1bcfa_
        complexed with ba, fe2, hem, mg
      4. 1084940Domain d1sofe_: 1sof E: [118977]
        Other proteins in same PDB: d1sofa1
        automated match to d1bcfa_
        complexed with ba, fe2, hem, mg
      5. 1084941Domain d1soff_: 1sof F: [118978]
        Other proteins in same PDB: d1sofa1
        automated match to d1bcfa_
        complexed with ba, fe2, hem, mg
      6. 1084942Domain d1sofg_: 1sof G: [118979]
        Other proteins in same PDB: d1sofa1
        automated match to d1bcfa_
        complexed with ba, fe2, hem, mg
      7. 1084943Domain d1sofh_: 1sof H: [118980]
        Other proteins in same PDB: d1sofa1
        automated match to d1bcfa_
        complexed with ba, fe2, hem, mg
    2. Domains for 2fkz:
      1. 1084929Domain d2fkza_: 2fkz A: [133688]
        automated match to d1bcfa_
        complexed with fe2, hem, mg
      2. 1084930Domain d2fkzb_: 2fkz B: [133689]
        automated match to d1bcfa_
        complexed with fe2, hem, mg
      3. 1084931Domain d2fkzc_: 2fkz C: [133690]
        automated match to d1bcfa_
        complexed with fe2, hem, mg
      4. 1084932Domain d2fkzd_: 2fkz D: [133691]
        automated match to d1bcfa_
        complexed with fe2, hem, mg
      5. 1084933Domain d2fkze_: 2fkz E: [133692]
        automated match to d1bcfa_
        complexed with fe2, hem, mg
      6. 1084934Domain d2fkzf_: 2fkz F: [133693]
        automated match to d1bcfa_
        complexed with fe2, hem, mg
      7. 1084935Domain d2fkzg_: 2fkz G: [133694]
        automated match to d1bcfa_
        complexed with fe2, hem, mg
      8. 1084936Domain d2fkzh_: 2fkz H: [133695]
        automated match to d1bcfa_
        complexed with fe2, hem, mg
    3. Domains for 2fl0:
      1. 1084944Domain d2fl0a_: 2fl0 A: [133696]
        automated match to d1bcfa_
        complexed with fe2, hem, mg
      2. 1084945Domain d2fl0b_: 2fl0 B: [133697]
        automated match to d1bcfa_
        complexed with fe2, hem, mg
      3. 1084946Domain d2fl0c_: 2fl0 C: [133698]
        automated match to d1bcfa_
        complexed with fe2, hem, mg
      4. 1084947Domain d2fl0d_: 2fl0 D: [133699]
        automated match to d1bcfa_
        complexed with fe2, hem, mg
      5. 1084948Domain d2fl0e_: 2fl0 E: [133700]
        automated match to d1bcfa_
        complexed with fe2, hem, mg
      6. 1084949Domain d2fl0f_: 2fl0 F: [133701]
        automated match to d1bcfa_
        complexed with fe2, hem, mg
      7. 1084950Domain d2fl0g_: 2fl0 G: [133702]
        automated match to d1bcfa_
        complexed with fe2, hem, mg
      8. 1084951Domain d2fl0h_: 2fl0 H: [133703]
        automated match to d1bcfa_
        complexed with fe2, hem, mg
  3. 1084952Blastochloris viridis [TaxId:1079] [193423] (1 PDB entry)
  4. 1084954Brucella melitensis [TaxId:29459] [188807] (1 PDB entry)
  5. 1084967Bullfrog (Rana catesbeiana) [TaxId:8400] [189485] (9 PDB entries)
    1. Domain for 3ka3:
    2. Domain for 3ka4:
    3. Domain for 3ka6:
    4. Domain for 3ka8:
    5. Domain for 3ka9:
    6. Domain for 3se1:
    7. Domain for 3sh6:
    8. Domain for 3shx:
    9. Domain for 4das:
  6. 1084977Burkholderia pseudomallei [TaxId:320372] [196065] (1 PDB entry)
  7. 1084979Helicobacter pylori [TaxId:210] [188725] (5 PDB entries)
    1. Domains for 3bve:
      1. 1084998Domain d3bvea_: 3bve A: [172839]
        automated match to d1krqa_
        complexed with gol
      2. 1084999Domain d3bveb_: 3bve B: [172840]
        automated match to d1krqa_
        complexed with gol
      3. 1085000Domain d3bvec_: 3bve C: [172841]
        automated match to d1krqa_
        complexed with gol
      4. 1085001Domain d3bved_: 3bve D: [172842]
        automated match to d1krqa_
        complexed with gol
      5. 1085002Domain d3bvee_: 3bve E: [172843]
        automated match to d1krqa_
        complexed with gol
      6. 1085003Domain d3bvef_: 3bve F: [172844]
        automated match to d1krqa_
        complexed with gol
    2. Domains for 3bvf:
      1. 1084980Domain d3bvfa_: 3bvf A: [172845]
        automated match to d1krqa_
        complexed with fe, gol, ipa
      2. 1084981Domain d3bvfb_: 3bvf B: [172846]
        automated match to d1krqa_
        complexed with fe, gol, ipa
      3. 1084982Domain d3bvfc_: 3bvf C: [172847]
        automated match to d1krqa_
        complexed with fe, gol, ipa
      4. 1084983Domain d3bvfd_: 3bvf D: [172848]
        automated match to d1krqa_
        complexed with fe, gol, ipa
      5. 1084984Domain d3bvfe_: 3bvf E: [172849]
        automated match to d1krqa_
        complexed with fe, gol, ipa
      6. 1084985Domain d3bvff_: 3bvf F: [172850]
        automated match to d1krqa_
        complexed with fe, gol, ipa
    3. Domains for 3bvi:
      1. 1085004Domain d3bvia_: 3bvi A: [172851]
        automated match to d1krqa_
        complexed with fe, gol
      2. 1085005Domain d3bvib_: 3bvi B: [172852]
        automated match to d1krqa_
        complexed with fe, gol
      3. 1085006Domain d3bvic_: 3bvi C: [172853]
        automated match to d1krqa_
        complexed with fe, gol
      4. 1085007Domain d3bvid_: 3bvi D: [172854]
        automated match to d1krqa_
        complexed with fe, gol
      5. 1085008Domain d3bvie_: 3bvi E: [172855]
        automated match to d1krqa_
        complexed with fe, gol
      6. 1085009Domain d3bvif_: 3bvi F: [172856]
        automated match to d1krqa_
        complexed with fe, gol
    4. Domains for 3bvk:
      1. 1084986Domain d3bvka_: 3bvk A: [172857]
        automated match to d1krqa_
        complexed with fe, gol
      2. 1084987Domain d3bvkb_: 3bvk B: [172858]
        automated match to d1krqa_
        complexed with fe, gol
      3. 1084988Domain d3bvkc_: 3bvk C: [172859]
        automated match to d1krqa_
        complexed with fe, gol
      4. 1084989Domain d3bvkd_: 3bvk D: [172860]
        automated match to d1krqa_
        complexed with fe, gol
      5. 1084990Domain d3bvke_: 3bvk E: [172861]
        automated match to d1krqa_
        complexed with fe, gol
      6. 1084991Domain d3bvkf_: 3bvk F: [172862]
        automated match to d1krqa_
        complexed with fe, gol
    5. Domains for 3bvl:
      1. 1084992Domain d3bvla_: 3bvl A: [172863]
        automated match to d1krqa_
        complexed with fe, gol
      2. 1084993Domain d3bvlb_: 3bvl B: [172864]
        automated match to d1krqa_
        complexed with fe, gol
      3. 1084994Domain d3bvlc_: 3bvl C: [172865]
        automated match to d1krqa_
        complexed with fe, gol
      4. 1084995Domain d3bvld_: 3bvl D: [172866]
        automated match to d1krqa_
        complexed with fe, gol
      5. 1084996Domain d3bvle_: 3bvl E: [172867]
        automated match to d1krqa_
        complexed with fe, gol
      6. 1084997Domain d3bvlf_: 3bvl F: [172868]
        automated match to d1krqa_
        complexed with fe, gol
  8. 1085010Helicobacter pylori [TaxId:85963] [188967] (1 PDB entry)
  9. 1085017Horse (Equus caballus) [TaxId:9796] [187199] (6 PDB entries)
    1. Domain for 2v2l:
    2. Domain for 2v2m:
    3. Domain for 2v2p:
    4. Domain for 2v2r:
    5. Domain for 2za8:
    6. Domain for 3np2:
  10. 1085024Human (Homo sapiens) [TaxId:9606] [187027] (14 PDB entries)
    1. Domain for 2cei:
    2. Domain for 2chi:
    3. Domain for 2cih:
    4. Domain for 2clu:
    5. Domain for 2cn6:
    6. Domain for 2cn7:
    7. Domain for 2iu2:
    8. Domains for 2z6m:
      1. 1085038Domain d2z6ma_: 2z6m A: [171072]
        automated match to d1fhaa_
        complexed with ca, mpd, zn
      2. 1085039Domain d2z6mb_: 2z6m B: [171073]
        automated match to d1fhaa_
        complexed with ca, mpd, zn
      3. 1085040Domain d2z6mc_: 2z6m C: [171074]
        automated match to d1fhaa_
        complexed with ca, mpd, zn
      4. 1085041Domain d2z6md_: 2z6m D: [171075]
        automated match to d1fhaa_
        complexed with ca, mpd, zn
      5. 1085042Domain d2z6me_: 2z6m E: [171076]
        automated match to d1fhaa_
        complexed with ca, mpd, zn
      6. 1085043Domain d2z6mf_: 2z6m F: [171077]
        automated match to d1fhaa_
        complexed with ca, mpd, zn
      7. 1085044Domain d2z6mg_: 2z6m G: [171078]
        automated match to d1fhaa_
        complexed with ca, mpd, zn
      8. 1085045Domain d2z6mh_: 2z6m H: [171079]
        automated match to d1fhaa_
        complexed with ca, mpd, zn
      9. 1085046Domain d2z6mi_: 2z6m I: [171080]
        automated match to d1fhaa_
        complexed with ca, mpd, zn
      10. 1085047Domain d2z6mj_: 2z6m J: [171081]
        automated match to d1fhaa_
        complexed with ca, mpd, zn
      11. 1085048Domain d2z6mk_: 2z6m K: [171082]
        automated match to d1fhaa_
        complexed with ca, mpd, zn
      12. 1085049Domain d2z6ml_: 2z6m L: [171083]
        automated match to d1fhaa_
        complexed with ca, mpd, zn
    9. Domain for 3ajo:
    10. Domain for 3ajp:
    11. Domain for 3ajq:
    12. Domain for 4dyx:
    13. Domain for 4dyy:
    14. Domain for 4dz0:
  11. 1085050Listeria innocua [TaxId:1642] [186977] (3 PDB entries)
    1. Domains for 2bjy:
      1. 1085079Domain d2bjyb_: 2bjy B: [128635]
        Other proteins in same PDB: d2bjya1
        automated match to d1qgha_
        mutant
      2. 1085080Domain d2bjyc_: 2bjy C: [128636]
        Other proteins in same PDB: d2bjya1
        automated match to d1qgha_
        mutant
      3. 1085081Domain d2bjyd_: 2bjy D: [128637]
        Other proteins in same PDB: d2bjya1
        automated match to d1qgha_
        mutant
      4. 1085082Domain d2bjye_: 2bjy E: [128638]
        Other proteins in same PDB: d2bjya1
        automated match to d1qgha_
        mutant
      5. 1085083Domain d2bjyf_: 2bjy F: [128639]
        Other proteins in same PDB: d2bjya1
        automated match to d1qgha_
        mutant
      6. 1085084Domain d2bjyg_: 2bjy G: [128640]
        Other proteins in same PDB: d2bjya1
        automated match to d1qgha_
        mutant
      7. 1085085Domain d2bjyh_: 2bjy H: [128641]
        Other proteins in same PDB: d2bjya1
        automated match to d1qgha_
        mutant
      8. 1085086Domain d2bjyi_: 2bjy I: [128642]
        Other proteins in same PDB: d2bjya1
        automated match to d1qgha_
        mutant
      9. 1085087Domain d2bjyj_: 2bjy J: [128643]
        Other proteins in same PDB: d2bjya1
        automated match to d1qgha_
        mutant
      10. 1085088Domain d2bjyk_: 2bjy K: [128644]
        Other proteins in same PDB: d2bjya1
        automated match to d1qgha_
        mutant
      11. 1085089Domain d2bjyl_: 2bjy L: [128645]
        Other proteins in same PDB: d2bjya1
        automated match to d1qgha_
        mutant
    2. Domains for 2bk6:
      1. 1085051Domain d2bk6b_: 2bk6 B: [128661]
        Other proteins in same PDB: d2bk6a1
        automated match to d1qgha_
        mutant
      2. 1085052Domain d2bk6c_: 2bk6 C: [128662]
        Other proteins in same PDB: d2bk6a1
        automated match to d1qgha_
        mutant
      3. 1085053Domain d2bk6d_: 2bk6 D: [128663]
        Other proteins in same PDB: d2bk6a1
        automated match to d1qgha_
        mutant
      4. 1085054Domain d2bk6e_: 2bk6 E: [128664]
        Other proteins in same PDB: d2bk6a1
        automated match to d1qgha_
        mutant
      5. 1085055Domain d2bk6f_: 2bk6 F: [128665]
        Other proteins in same PDB: d2bk6a1
        automated match to d1qgha_
        mutant
    3. Domains for 2bkc:
      1. 1085056Domain d2bkcb_: 2bkc B: [128676]
        Other proteins in same PDB: d2bkca1
        automated match to d1qgha_
        mutant
      2. 1085057Domain d2bkcc_: 2bkc C: [128677]
        Other proteins in same PDB: d2bkca1
        automated match to d1qgha_
        mutant
      3. 1085058Domain d2bkcd_: 2bkc D: [128678]
        Other proteins in same PDB: d2bkca1
        automated match to d1qgha_
        mutant
      4. 1085059Domain d2bkce_: 2bkc E: [128679]
        Other proteins in same PDB: d2bkca1
        automated match to d1qgha_
        mutant
      5. 1085060Domain d2bkcf_: 2bkc F: [128680]
        Other proteins in same PDB: d2bkca1
        automated match to d1qgha_
        mutant
      6. 1085061Domain d2bkcg_: 2bkc G: [128681]
        Other proteins in same PDB: d2bkca1
        automated match to d1qgha_
        mutant
      7. 1085062Domain d2bkch_: 2bkc H: [128682]
        Other proteins in same PDB: d2bkca1
        automated match to d1qgha_
        mutant
      8. 1085063Domain d2bkci_: 2bkc I: [128683]
        Other proteins in same PDB: d2bkca1
        automated match to d1qgha_
        mutant
      9. 1085064Domain d2bkcj_: 2bkc J: [128684]
        Other proteins in same PDB: d2bkca1
        automated match to d1qgha_
        mutant
      10. 1085065Domain d2bkck_: 2bkc K: [128685]
        Other proteins in same PDB: d2bkca1
        automated match to d1qgha_
        mutant
      11. 1085066Domain d2bkcl_: 2bkc L: [128686]
        Other proteins in same PDB: d2bkca1
        automated match to d1qgha_
        mutant
      12. 1085067Domain d2bkcm_: 2bkc M: [128687]
        Other proteins in same PDB: d2bkca1
        automated match to d1qgha_
        mutant
      13. 1085068Domain d2bkcn_: 2bkc N: [128688]
        Other proteins in same PDB: d2bkca1
        automated match to d1qgha_
        mutant
      14. 1085069Domain d2bkco_: 2bkc O: [128689]
        Other proteins in same PDB: d2bkca1
        automated match to d1qgha_
        mutant
      15. 1085070Domain d2bkcp_: 2bkc P: [128690]
        Other proteins in same PDB: d2bkca1
        automated match to d1qgha_
        mutant
      16. 1085071Domain d2bkcq_: 2bkc Q: [128691]
        Other proteins in same PDB: d2bkca1
        automated match to d1qgha_
        mutant
      17. 1085072Domain d2bkcr_: 2bkc R: [128692]
        Other proteins in same PDB: d2bkca1
        automated match to d1qgha_
        mutant
      18. 1085073Domain d2bkcs_: 2bkc S: [128693]
        Other proteins in same PDB: d2bkca1
        automated match to d1qgha_
        mutant
      19. 1085074Domain d2bkct_: 2bkc T: [128694]
        Other proteins in same PDB: d2bkca1
        automated match to d1qgha_
        mutant
      20. 1085075Domain d2bkcu_: 2bkc U: [128695]
        Other proteins in same PDB: d2bkca1
        automated match to d1qgha_
        mutant
      21. 1085076Domain d2bkcv_: 2bkc V: [128696]
        Other proteins in same PDB: d2bkca1
        automated match to d1qgha_
        mutant
      22. 1085077Domain d2bkcx_: 2bkc X: [128697]
        Other proteins in same PDB: d2bkca1
        automated match to d1qgha_
        mutant
      23. 1085078Domain d2bkcy_: 2bkc Y: [128698]
        Other proteins in same PDB: d2bkca1
        automated match to d1qgha_
        mutant
  12. 1085090Listeria monocytogenes [TaxId:1639] [187885] (1 PDB entry)
  13. 1085115Mycobacterium smegmatis [TaxId:1772] [186784] (1 PDB entry)
  14. 1085120Pseudomonas aeruginosa [TaxId:287] [189215] (2 PDB entries)
    1. Domain for 3is7:
    2. Domain for 4e6k:
  15. 1085123Rhodobacter sphaeroides [TaxId:272943] [189145] (1 PDB entry)
  16. 1085127Salmonella enterica [TaxId:439842] [189595] (2 PDB entries)
    1. Domain for 3ak8:
    2. Domain for 3ak9:
  17. 1085130Streptococcus suis [TaxId:1307] [187539] (1 PDB entry)
  18. 1085143Thermotoga maritima [TaxId:243274] [188168] (1 PDB entry)
  19. 1085152Trichoplusia ni [TaxId:7111] [188170] (1 PDB entry)
  20. 1085164Vibrio cholerae [TaxId:243277] [189679] (1 PDB entry)
  21. 1085168Yersinia pestis [TaxId:187410] [195837] (1 PDB entry)

More info for Protein automated matches from a.25.1.1: Ferritin

Timeline for Protein automated matches from a.25.1.1: Ferritin: